RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	MRPL38	P35996	138 aa	Predicted RBP	2.73	□□□□□ -1.97
SPI1	YER150W	YER084W	P40057	128 aa		2.73	□□□□□ -1.97
SPI1	YER150W	NUP170	P38181	1502 aa		2.73	□□□□□ -1.97
SPI1	YER150W	YAL065C	O13511	128 aa		2.72	□□□□□ -1.97
SPI1	YER150W	YER188C-A	P0C0V2	99 aa		2.72	□□□□□ -1.97
SPI1	YER150W	TIM12	P32830	109 aa		2.72	□□□□□ -1.97
SPI1	YER150W	IRC21	Q04772	201 aa		2.72	□□□□□ -1.97
SPI1	YER150W	BCK1	Q01389	1478 aa		2.71	□□□□□ -1.97
SPI1	YER150W	YGL014C-A	P0C5N1	53 aa		2.7	□□□□□ -1.98
SPI1	YER150W	CDC39	P25655	2108 aa	Known RBP	2.7	□□□□□ -1.98
SPI1	YER150W	YJR146W	P47174	117 aa		2.7	□□□□□ -1.98
SPI1	YER150W	YGL260W	P53056	76 aa		2.7	□□□□□ -1.98
SPI1	YER150W	YMR230W-A	Q3E7B5	62 aa		2.7	□□□□□ -1.98
SPI1	YER150W	UBR2	Q07963	1872 aa		2.69	□□□□□ -1.98
SPI1	YER150W	YBL071C	P38185	102 aa		2.69	□□□□□ -1.98
SPI1	YER150W	MPC2	P38857	129 aa		2.69	□□□□□ -1.98
SPI1	YER150W	MRX7	P53869	86 aa		2.69	□□□□□ -1.98
SPI1	YER150W	SED1	Q01589	338 aa		2.69	□□□□□ -1.98
SPI1	YER150W	MIX17	Q03667	156 aa		2.69	□□□□□ -1.98
SPI1	YER150W	COX19	Q3E731	98 aa		2.69	□□□□□ -1.98
SPI1	YER150W	FKS3	Q04952	1785 aa		2.69	□□□□□ -1.98
SPI1	YER150W	PAU6	P0CE90	120 aa		2.68	□□□□□ -1.98
SPI1	YER150W	PAU18	P0CE91	120 aa		2.68	□□□□□ -1.98
SPI1	YER150W	QCR9	P22289	66 aa		2.68	□□□□□ -1.98
SPI1	YER150W	YHR173C	P38864	112 aa		2.68	□□□□□ -1.98
SPI1	YER150W	YIL163C	P40448	117 aa		2.68	□□□□□ -1.98
SPI1	YER150W	VPS55	P47111	140 aa		2.68	□□□□□ -1.98
SPI1	YER150W	RDS3	Q06835	107 aa	Predicted RBP	2.68	□□□□□ -1.98
SPI1	YER150W	YGR121W-A	Q3E816	71 aa		2.68	□□□□□ -1.98
SPI1	YER150W	PEP1	P32319	1579 aa		2.68	□□□□□ -1.98
SPI1	YER150W	TY4B-H	P0C2J7	1802 aa		2.68	□□□□□ -1.98
SPI1	YER150W	TY3B-G	Q99315	1547 aa		2.68	□□□□□ -1.98
SPI1	YER150W	PAU8	P0CE92	120 aa		2.67	□□□□□ -1.98
SPI1	YER150W	PAU11	P0CE93	120 aa		2.67	□□□□□ -1.98
SPI1	YER150W	PAU13	P38725	120 aa		2.67	□□□□□ -1.98
SPI1	YER150W	PAU4	P53427	120 aa		2.67	□□□□□ -1.98
SPI1	YER150W	PAU10	Q03050	120 aa		2.67	□□□□□ -1.98
SPI1	YER150W	YMR122C	Q03879	124 aa		2.67	□□□□□ -1.98
SPI1	YER150W	YLR162W	Q06235	118 aa		2.67	□□□□□ -1.98
SPI1	YER150W	PAU9	Q3E770	120 aa		2.67	□□□□□ -1.98
SPI1	YER150W	USO1	P25386	1790 aa		2.66	□□□□□ -1.98
SPI1	YER150W	PMD1	P32634	1753 aa		2.66	□□□□□ -1.98
SPI1	YER150W	SPO14	P36126	1683 aa		2.66	□□□□□ -1.98
SPI1	YER150W	CDC25	P04821	1589 aa		2.66	□□□□□ -1.98
SPI1	YER150W	CCW14	O13547	238 aa		2.66	□□□□□ -1.98
SPI1	YER150W	RPL33A	P05744	107 aa	Known RBP	2.66	□□□□□ -1.98
SPI1	YER150W	FPR2	P32472	135 aa		2.66	□□□□□ -1.98
SPI1	YER150W	YSY6	P38374	65 aa		2.66	□□□□□ -1.98
SPI1	YER150W	AIM4	P38305	123 aa	Predicted RBP	2.65	□□□□□ -1.99
SPI1	YER150W	SPI1	P40092	148 aa		2.65	□□□□□ -1.99
SPI1	YER150W	BSC4	P53841	131 aa		2.65	□□□□□ -1.99
SPI1	YER150W	PRM7	Q12459	698 aa		2.65	□□□□□ -1.99
SPI1	YER150W	RIM15	P43565	1770 aa		2.64	□□□□□ -1.99
SPI1	YER150W	DSE2	P38844	325 aa		2.64	□□□□□ -1.99
SPI1	YER150W	VAM10	Q08474	114 aa		2.64	□□□□□ -1.99
SPI1	YER150W	YKL023C-A	Q2V2P3	75 aa		2.64	□□□□□ -1.99
SPI1	YER150W	TAR1	Q8TGM6	124 aa		2.64	□□□□□ -1.99
SPI1	YER150W	YSF3	P0C074	85 aa	Predicted RBP	2.63	□□□□□ -1.99
SPI1	YER150W	AIM19	P40502	157 aa		2.63	□□□□□ -1.99
SPI1	YER150W	YDR010C	Q12426	110 aa		2.63	□□□□□ -1.99
SPI1	YER150W	CYR1	P08678	2026 aa	Known RBP	2.63	□□□□□ -1.99
SPI1	YER150W	APC1	P53886	1748 aa		2.62	□□□□□ -1.99
SPI1	YER150W	PAU1	P0CE88	120 aa		2.62	□□□□□ -1.99
SPI1	YER150W	PAU14	P0CE89	120 aa		2.62	□□□□□ -1.99
SPI1	YER150W	ERI1	P62651	68 aa	Known RBP	2.62	□□□□□ -1.99
SPI1	YER150W	YGL041C-B	Q3E750	60 aa		2.62	□□□□□ -1.99
SPI1	YER150W	YGR035W-A	Q45U48	73 aa		2.62	□□□□□ -1.99
SPI1	YER150W	YBT1	P32386	1661 aa		2.62	□□□□□ -1.99
SPI1	YER150W	IML1	P47170	1584 aa		2.61	□□□□□ -1.99
SPI1	YER150W	MOT1	P32333	1867 aa		2.61	□□□□□ -1.99
SPI1	YER150W	SMX2	P40204	77 aa	Known RBP	2.61	□□□□□ -1.99
SPI1	YER150W	COA3	Q3E7B2	85 aa		2.61	□□□□□ -1.99
SPI1	YER150W	TY4B-J	P47024	1803 aa		2.61	□□□□□ -1.99
SPI1	YER150W	STT4	P37297	1900 aa		2.6	□□□□□ -1.99
SPI1	YER150W	LCL2	Q08045	131 aa		2.6	□□□□□ -1.99
SPI1	YER150W	YIL156W-B	Q2V2P4	73 aa		2.6	□□□□□ -1.99
SPI1	YER150W	YDR246W-A	Q3E763	66 aa		2.6	□□□□□ -1.99
SPI1	YER150W	NOP10	Q6Q547	58 aa	Predicted RBP	2.6	□□□□□ -1.99
SPI1	YER150W	MLP2	P40457	1679 aa		2.6	□□□□□ -1.99
SPI1	YER150W	AGA2	P32781	87 aa		2.59	□□□□□ -1.99
SPI1	YER150W	PAU7	P39545	55 aa		2.59	□□□□□ -1.99
SPI1	YER150W	YDR210W	Q03482	75 aa		2.59	□□□□□ -1.99
SPI1	YER150W	CCW12	Q12127	133 aa		2.59	□□□□□ -1.99
SPI1	YER150W	RPS11A	P0CX47	156 aa	Known RBP	2.58	□□□□□ -2
SPI1	YER150W	RPS11B	P0CX48	156 aa	Known RBP	2.58	□□□□□ -2
SPI1	YER150W	CHC1	P22137	1653 aa	Known RBP	2.57	□□□□□ -2
SPI1	YER150W	PAU20	Q08322	120 aa		2.57	□□□□□ -2
SPI1	YER150W	NTE1	Q04958	1679 aa		2.57	□□□□□ -2
SPI1	YER150W	YBR219C	P38317	127 aa		2.56	□□□□□ -2
SPI1	YER150W	YEL008W	P40001	126 aa		2.56	□□□□□ -2
SPI1	YER150W	MRPS12	P53732	153 aa		2.56	□□□□□ -2
SPI1	YER150W	THO2	P53552	1597 aa	Known RBP	2.55	□□□□□ -2
SPI1	YER150W	RKR1	Q04781	1562 aa		2.55	□□□□□ -2
SPI1	YER150W	SLH1	P53327	1967 aa	Known RBP	2.54	□□□□□ -2
SPI1	YER150W	YGR240C-A	Q3E786	66 aa		2.54	□□□□□ -2
SPI1	YER150W	NUP188	P52593	1655 aa	Known RBP	2.53	□□□□□ -2
SPI1	YER150W	BPH1	P25356	2167 aa		2.53	□□□□□ -2
SPI1	YER150W	YDR182W-A	Q3E796	67 aa		2.53	□□□□□ -2
SPI1	YER150W	YRF1-1	P0CX20	1796 aa		2.53	□□□□□ -2
SPI1	YER150W	YRF1-5	P0CX21	1796 aa		2.53	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms