RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C PAU19P0CE85 124 aa0.63□□□□□ -2.31
SEC3YER008C PAU3P25610 124 aa0.63□□□□□ -2.31
SEC3YER008C SNU13P39990 126 aaKnown RBP0.63□□□□□ -2.31
SEC3YER008C MIX14Q04341 121 aa0.63□□□□□ -2.31
SEC3YER008C FIT1Q04433 528 aa0.63□□□□□ -2.31
SEC3YER008C ZEO1Q08245 113 aa0.62□□□□□ -2.31
SEC3YER008C FIT3Q08907 204 aa0.62□□□□□ -2.31
SEC3YER008C YMR030W-AQ3E760 96 aa0.62□□□□□ -2.31
SEC3YER008C MRPL44P19956 98 aa0.62□□□□□ -2.31
SEC3YER008C SVP26P38869 228 aa0.62□□□□□ -2.31
SEC3YER008C GTT1P40582 234 aa0.62□□□□□ -2.31
SEC3YER008C YDR042CQ03205 200 aa0.62□□□□□ -2.31
SEC3YER008C NHP10Q03435 203 aa0.62□□□□□ -2.31
SEC3YER008C YMR090WQ04304 227 aaKnown RBP0.62□□□□□ -2.31
SEC3YER008C POC4Q12245 148 aaPredicted RBP0.62□□□□□ -2.31
SEC3YER008C COA3Q3E7B2 85 aa0.62□□□□□ -2.31
SEC3YER008C PCC1Q3E833 88 aa0.62□□□□□ -2.31
SEC3YER008C POR2P40478 281 aa0.62□□□□□ -2.31
SEC3YER008C ATP19P81451 68 aa0.62□□□□□ -2.31
SEC3YER008C HMRA1P0CY11 126 aa0.61□□□□□ -2.31
SEC3YER008C YBR242WP38331 238 aa0.61□□□□□ -2.31
SEC3YER008C PAU5P43575 122 aa0.61□□□□□ -2.31
SEC3YER008C YGL149WP53116 101 aa0.61□□□□□ -2.31
SEC3YER008C MPC1P53157 130 aaKnown RBP0.61□□□□□ -2.31
SEC3YER008C AUA1P32450 94 aa0.61□□□□□ -2.31
SEC3YER008C MRPL38P35996 138 aaPredicted RBP0.61□□□□□ -2.31
SEC3YER008C YBR032WP38223 100 aa0.61□□□□□ -2.31
SEC3YER008C TDA2P40045 126 aa0.61□□□□□ -2.31
SEC3YER008C NAT5Q08689 176 aa0.61□□□□□ -2.31
SEC3YER008C TOR2P32600 2474 aaKnown RBP0.61□□□□□ -2.31
SEC3YER008C RPL33AP05744 107 aaKnown RBP0.61□□□□□ -2.31
SEC3YER008C YIL163CP40448 117 aa0.61□□□□□ -2.31
SEC3YER008C CCW12Q12127 133 aa0.61□□□□□ -2.31
SEC3YER008C YNL146C-AQ3E7Z1 64 aa0.61□□□□□ -2.31
SEC3YER008C MRPL11P36521 249 aaPredicted RBP0.61□□□□□ -2.31
SEC3YER008C YLR285C-AQ3E771 56 aa0.61□□□□□ -2.31
SEC3YER008C BLM10P43583 2143 aa0.6□□□□□ -2.31
SEC3YER008C PAU16P35994 123 aa0.6□□□□□ -2.31
SEC3YER008C HSP10P38910 106 aa0.6□□□□□ -2.31
SEC3YER008C PAU15P40585 124 aa0.6□□□□□ -2.31
SEC3YER008C YMR122CQ03879 124 aa0.6□□□□□ -2.31
SEC3YER008C COA4Q05809 96 aa0.6□□□□□ -2.31
SEC3YER008C YSF3P0C074 85 aaPredicted RBP0.6□□□□□ -2.31
SEC3YER008C YDR029WQ12111 104 aa0.6□□□□□ -2.31
SEC3YER008C SEN1Q00416 2231 aaKnown RBP0.6□□□□□ -2.31
SEC3YER008C ROX3P25046 220 aa0.59□□□□□ -2.31
SEC3YER008C IMP2P46972 177 aa0.59□□□□□ -2.32
SEC3YER008C RPS22AP0C0W1 130 aaKnown RBP0.59□□□□□ -2.32
SEC3YER008C PRE1P22141 198 aaKnown RBP0.59□□□□□ -2.32
SEC3YER008C EMC5P40540 141 aa0.59□□□□□ -2.32
SEC3YER008C SNN1P48232 102 aa0.59□□□□□ -2.32
SEC3YER008C DAD1Q12248 94 aa0.59□□□□□ -2.32
SEC3YER008C ATG8P38182 117 aaRIP-Chip data0.58□□□□□ -2.32not detected
SEC3YER008C RPL13BP40212 199 aaKnown RBP0.58□□□□□ -2.32
SEC3YER008C NCE101Q02820 53 aa0.58□□□□□ -2.32
SEC3YER008C ICY1Q04329 127 aa0.58□□□□□ -2.32
SEC3YER008C MSL1P40567 111 aaPredicted RBP0.58□□□□□ -2.32
SEC3YER008C CCW14O13547 238 aa0.57□□□□□ -2.32
SEC3YER008C SMX2P40204 77 aaKnown RBP0.57□□□□□ -2.32
SEC3YER008C VPS55P47111 140 aa0.57□□□□□ -2.32
SEC3YER008C YNL122CP53921 115 aaPredicted RBP0.57□□□□□ -2.32
SEC3YER008C LCL2Q08045 131 aa0.57□□□□□ -2.32
SEC3YER008C YFL065CP43539 102 aa0.57□□□□□ -2.32
SEC3YER008C YHL005CP38752 130 aa0.57□□□□□ -2.32
SEC3YER008C YOL131WQ08270 108 aa0.57□□□□□ -2.32
SEC3YER008C YOR343CQ12484 108 aa0.57□□□□□ -2.32
SEC3YER008C HMRA2P0CY13 119 aa0.56□□□□□ -2.32
SEC3YER008C YGL010WP25338 174 aa0.56□□□□□ -2.32
SEC3YER008C HUA1P40325 198 aa0.56□□□□□ -2.32
SEC3YER008C GRX5Q02784 150 aa0.56□□□□□ -2.32
SEC3YER008C LCL1Q02786 101 aa0.56□□□□□ -2.32
SEC3YER008C RPS22BQ3E7Y3 130 aaKnown RBP0.56□□□□□ -2.32
SEC3YER008C RPL36BO14455 100 aaKnown RBP0.56□□□□□ -2.32
SEC3YER008C RPL36AP05745 100 aaPredicted RBP0.56□□□□□ -2.32
SEC3YER008C PFY1P07274 126 aa0.56□□□□□ -2.32
SEC3YER008C ICS3P47034 131 aa0.56□□□□□ -2.32
SEC3YER008C YPR203WQ08994 102 aa0.56□□□□□ -2.32
SEC3YER008C YBR013CP38215 129 aa0.55□□□□□ -2.32
SEC3YER008C MHF1Q3E835 90 aa0.55□□□□□ -2.32
SEC3YER008C YHR138CP38841 114 aaPredicted RBP0.55□□□□□ -2.32
SEC3YER008C COA6Q3E846 104 aa0.55□□□□□ -2.32
SEC3YER008C ECM12O13529 151 aa0.55□□□□□ -2.32
SEC3YER008C CYB5P40312 120 aa0.55□□□□□ -2.32
SEC3YER008C ENV10Q99382 181 aa0.55□□□□□ -2.32
SEC3YER008C YOL013W-AP0C272 63 aaPredicted RBP0.54□□□□□ -2.32
SEC3YER008C SPC1P46965 94 aa0.54□□□□□ -2.32
SEC3YER008C PAU6P0CE90 120 aa0.54□□□□□ -2.32
SEC3YER008C PAU18P0CE91 120 aa0.54□□□□□ -2.32
SEC3YER008C RPA12P32529 125 aaKnown RBP0.54□□□□□ -2.32
SEC3YER008C GCV3P39726 170 aaPredicted RBP0.54□□□□□ -2.32
SEC3YER008C LSM6Q06406 86 aaKnown RBP0.54□□□□□ -2.32
SEC3YER008C HPA2Q06592 156 aa0.54□□□□□ -2.32
SEC3YER008C CWP2P43497 92 aa0.54□□□□□ -2.32
SEC3YER008C MIC27P50945 234 aa0.54□□□□□ -2.32
SEC3YER008C YDR119W-AQ2V2P9 66 aa0.54□□□□□ -2.32
SEC3YER008C YCR085WP25650 117 aa0.54□□□□□ -2.32
SEC3YER008C RSM18P40033 138 aa0.53□□□□□ -2.32
SEC3YER008C VMA21P41806 77 aa0.53□□□□□ -2.32
SEC3YER008C YPR145C-AQ2V2P0 78 aa0.53□□□□□ -2.32
SEC3YER008C RPS11AP0CX47 156 aaKnown RBP0.53□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms