RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	YRF1-8	P0CX22	1796 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	SEC7	P11075	2009 aa	Known RBP	0.82	□□□□□ -2.28
ATP16	YDL004W	YSP2	Q06681	1438 aa		0.81	□□□□□ -2.28
ATP16	YDL004W	FPR2	P32472	135 aa		0.81	□□□□□ -2.28
ATP16	YDL004W	MRPL38	P35996	138 aa	Predicted RBP	0.81	□□□□□ -2.28
ATP16	YDL004W	MRPS12	P53732	153 aa		0.81	□□□□□ -2.28
ATP16	YDL004W	YOR314W	Q12506	109 aa		0.81	□□□□□ -2.28
ATP16	YDL004W	YDR381C-A	Q3E6R5	114 aa		0.81	□□□□□ -2.28
ATP16	YDL004W	YNR034W-A	Q3E841	98 aa		0.81	□□□□□ -2.28
ATP16	YDL004W	MOT1	P32333	1867 aa		0.81	□□□□□ -2.28
ATP16	YDL004W	PAI3	P01094	68 aa		0.8	□□□□□ -2.28
ATP16	YDL004W	RPS11A	P0CX47	156 aa	Known RBP	0.8	□□□□□ -2.28
ATP16	YDL004W	RPS11B	P0CX48	156 aa	Known RBP	0.8	□□□□□ -2.28
ATP16	YDL004W	COX7	P10174	60 aa		0.8	□□□□□ -2.28
ATP16	YDL004W	YHR173C	P38864	112 aa		0.8	□□□□□ -2.28
ATP16	YDL004W	RPL38	P49167	78 aa	Known RBP	0.8	□□□□□ -2.28
ATP16	YDL004W	LCL1	Q02786	101 aa		0.8	□□□□□ -2.28
ATP16	YDL004W	YDR210W	Q03482	75 aa		0.8	□□□□□ -2.28
ATP16	YDL004W	LSM2	P38203	95 aa	Known RBP	0.79	□□□□□ -2.28
ATP16	YDL004W	SWM2	P40342	146 aa		0.79	□□□□□ -2.28
ATP16	YDL004W	PAU23	Q07987	124 aa		0.79	□□□□□ -2.28
ATP16	YDL004W	PAU17	Q12370	124 aa		0.79	□□□□□ -2.28
ATP16	YDL004W	YDR010C	Q12426	110 aa		0.79	□□□□□ -2.28
ATP16	YDL004W	YOR034C-A	Q3E735	80 aa		0.79	□□□□□ -2.28
ATP16	YDL004W	YNL042W-B	Q3E7Z2	85 aa		0.79	□□□□□ -2.28
ATP16	YDL004W	POL1	P13382	1468 aa		0.79	□□□□□ -2.28
ATP16	YDL004W	YRF1-2	P40105	1681 aa		0.78	□□□□□ -2.28
ATP16	YDL004W	TY1B-PR2	P0C2J0	1756 aa		0.78	□□□□□ -2.28
ATP16	YDL004W	YAL065C	O13511	128 aa		0.78	□□□□□ -2.28
ATP16	YDL004W	ATX1	P38636	73 aa		0.78	□□□□□ -2.28
ATP16	YDL004W	YLR307C-A	Q3E825	87 aa		0.78	□□□□□ -2.28
ATP16	YDL004W	NUP159	P40477	1460 aa		0.78	□□□□□ -2.28
ATP16	YDL004W	FAS2	P19097	1887 aa	Known RBP	0.78	□□□□□ -2.29
ATP16	YDL004W	QCR9	P22289	66 aa		0.77	□□□□□ -2.29
ATP16	YDL004W	ATP18	P81450	59 aa		0.77	□□□□□ -2.29
ATP16	YDL004W	POC4	Q12245	148 aa	Predicted RBP	0.77	□□□□□ -2.29
ATP16	YDL004W	SMC4	Q12267	1418 aa		0.77	□□□□□ -2.29
ATP16	YDL004W	TY1B-NL2	Q99337	1749 aa	Known RBP	0.77	□□□□□ -2.29
ATP16	YDL004W	SEC16	P48415	2195 aa	Known RBP	0.76	□□□□□ -2.29
ATP16	YDL004W	SIN3	P22579	1536 aa		0.76	□□□□□ -2.29
ATP16	YDL004W	IQG1	Q12280	1495 aa		0.76	□□□□□ -2.29
ATP16	YDL004W	YLR157W-E	P0CF00	54 aa		0.76	□□□□□ -2.29
ATP16	YDL004W	YFL041W-A	Q3E817	63 aa		0.76	□□□□□ -2.29
ATP16	YDL004W	Q0032	Q9ZZX7	96 aa		0.76	□□□□□ -2.29
ATP16	YDL004W	RIM15	P43565	1770 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	TY1B-BR	Q12193	1756 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	APC1	P53886	1748 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	PAU7	P39545	55 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	SGF11	Q03067	99 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	YBR201C-A	Q2V2Q3	67 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	SDH6	Q3E785	79 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	YMR122W-A	Q3E842	84 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	HUB1	Q6Q546	73 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	ECM29	P38737	1868 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	TY1B-BL	Q12490	1755 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	DOP1	Q03921	1698 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	DNF3	Q12674	1656 aa		0.75	□□□□□ -2.29
ATP16	YDL004W	IML1	P47170	1584 aa		0.74	□□□□□ -2.29
ATP16	YDL004W	XRN1	P22147	1528 aa	Known RBP	0.74	□□□□□ -2.29
ATP16	YDL004W	YBR032W	P38223	100 aa		0.74	□□□□□ -2.29
ATP16	YDL004W	YNL198C	P40166	100 aa		0.74	□□□□□ -2.29
ATP16	YDL004W	YPR145C-A	Q2V2P0	78 aa		0.74	□□□□□ -2.29
ATP16	YDL004W	YDR119W-A	Q2V2P9	66 aa		0.74	□□□□□ -2.29
ATP16	YDL004W	NOP10	Q6Q547	58 aa	Predicted RBP	0.74	□□□□□ -2.29
ATP16	YDL004W	POL2	P21951	2222 aa	Known RBP	0.74	□□□□□ -2.29
ATP16	YDL004W	UFD4	P33202	1483 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	SCC2	Q04002	1493 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-DR6	P0C2I3	1755 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-LR2	P0C2I5	1755 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-JR2	P47100	1755 aa	Known RBP	0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-MR1	Q04214	1755 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-MR2	Q04670	1755 aa	Known RBP	0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-NL1	Q12112	1755 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-GR1	Q12141	1755 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-GR3	Q12316	1755 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-PL	Q12414	1755 aa	Known RBP	0.73	□□□□□ -2.29
ATP16	YDL004W	TY1B-OR	Q92393	1755 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	PRP8	P33334	2413 aa	Known RBP	0.73	□□□□□ -2.29
ATP16	YDL004W	EDC1	P53080	175 aa	Predicted RBP	0.73	□□□□□ -2.29
ATP16	YDL004W	ATP17	Q06405	101 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	RPO31	P04051	1460 aa		0.73	□□□□□ -2.29
ATP16	YDL004W	SSS1	P35179	80 aa		0.72	□□□□□ -2.29
ATP16	YDL004W	SPI1	P40092	148 aa		0.72	□□□□□ -2.29
ATP16	YDL004W	YPR108W-A	Q3E7B3	70 aa		0.72	□□□□□ -2.29
ATP16	YDL004W	YGR121W-A	Q3E816	71 aa		0.72	□□□□□ -2.29
ATP16	YDL004W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	0.72	□□□□□ -2.29
ATP16	YDL004W	MYO4	P32492	1471 aa		0.72	□□□□□ -2.29
ATP16	YDL004W	UTP10	P42945	1769 aa	Known RBP	0.71	□□□□□ -2.3
ATP16	YDL004W	URA2	P07259	2214 aa	Known RBP	0.71	□□□□□ -2.3
ATP16	YDL004W	YJR107C-A	P0CT86	78 aa		0.71	□□□□□ -2.3
ATP16	YDL004W	VPS15	P22219	1454 aa		0.71	□□□□□ -2.3
ATP16	YDL004W	BCK1	Q01389	1478 aa		0.71	□□□□□ -2.3
ATP16	YDL004W	TCB3	Q03640	1545 aa	Known RBP	0.7	□□□□□ -2.3
ATP16	YDL004W	RRP5	Q05022	1729 aa	Known RBP	0.7	□□□□□ -2.3
ATP16	YDL004W	YSY6	P38374	65 aa		0.7	□□□□□ -2.3
ATP16	YDL004W	YIL156W-B	Q2V2P4	73 aa		0.7	□□□□□ -2.3
ATP16	YDL004W	YDR182W-A	Q3E796	67 aa		0.7	□□□□□ -2.3
ATP16	YDL004W	TY1B-DR5	P0C2I2	1755 aa		0.7	□□□□□ -2.3
ATP16	YDL004W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	0.7	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms