RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C MIC10Q96VH5 97 aa4.68□□□□□ -1.66
RGD1YBR260C YOL085CQ99345 113 aa4.68□□□□□ -1.66
RGD1YBR260C BPH1P25356 2167 aa4.68□□□□□ -1.66
RGD1YBR260C PEX22P39718 180 aa4.67□□□□□ -1.66
RGD1YBR260C MIG3P39943 394 aa4.67□□□□□ -1.66
RGD1YBR260C KEG1P43614 200 aa4.67□□□□□ -1.66
RGD1YBR260C YMR105W-AQ8TGS8 64 aa4.67□□□□□ -1.66
RGD1YBR260C SEN1Q00416 2231 aaKnown RBP4.67□□□□□ -1.66
RGD1YBR260C SPS100P13130 326 aa4.67□□□□□ -1.66
RGD1YBR260C YGL088WP53151 121 aa4.67□□□□□ -1.66
RGD1YBR260C MMS2P53152 137 aa4.67□□□□□ -1.66
RGD1YBR260C IRC21Q04772 201 aa4.67□□□□□ -1.66
RGD1YBR260C YBL081WP38180 368 aaKnown RBP4.66□□□□□ -1.66
RGD1YBR260C ARC15P40518 154 aaRIP-Chip data4.66□□□□□ -1.66not detected
RGD1YBR260C RSM19P53733 91 aaPredicted RBP4.65□□□□□ -1.66
RGD1YBR260C YNL046WP53956 172 aa4.65□□□□□ -1.66
RGD1YBR260C RPL39P04650 51 aa4.65□□□□□ -1.67
RGD1YBR260C YNL234WP53857 426 aa4.65□□□□□ -1.67
RGD1YBR260C YDL009CQ12210 107 aa4.65□□□□□ -1.67
RGD1YBR260C ICS3P47034 131 aa4.64□□□□□ -1.67
RGD1YBR260C YJR107C-AP0CT86 78 aa4.63□□□□□ -1.67
RGD1YBR260C RGM1Q00453 211 aa4.63□□□□□ -1.67
RGD1YBR260C SPT4P32914 102 aaPredicted RBP4.62□□□□□ -1.67
RGD1YBR260C YGL034CP53186 121 aa4.62□□□□□ -1.67
RGD1YBR260C SRL1Q08673 210 aa4.62□□□□□ -1.67
RGD1YBR260C VPS13Q07878 3144 aa4.62□□□□□ -1.67
RGD1YBR260C GAT4P40569 121 aa4.62□□□□□ -1.67
RGD1YBR260C YBR200W-AQ3E755 54 aa4.62□□□□□ -1.67
RGD1YBR260C YOR381W-AQ3E804 55 aa4.62□□□□□ -1.67
RGD1YBR260C YOR376W-AQ3E805 51 aa4.62□□□□□ -1.67
RGD1YBR260C NOP10Q6Q547 58 aaPredicted RBP4.62□□□□□ -1.67
RGD1YBR260C MRPL38P35996 138 aaPredicted RBP4.61□□□□□ -1.67
RGD1YBR260C MRPL39P36533 70 aa4.61□□□□□ -1.67
RGD1YBR260C SIP18P50263 79 aa4.61□□□□□ -1.67
RGD1YBR260C YMR295CQ03559 197 aa4.61□□□□□ -1.67
RGD1YBR260C FAB1P34756 2278 aa4.6□□□□□ -1.67
RGD1YBR260C YEL008WP40001 126 aa4.6□□□□□ -1.67
RGD1YBR260C WWM1P43582 211 aaKnown RBP4.6□□□□□ -1.67
RGD1YBR260C RPL38P49167 78 aaKnown RBP4.6□□□□□ -1.67
RGD1YBR260C RPL26AP05743 127 aaKnown RBP4.6□□□□□ -1.67
RGD1YBR260C RPL26BP53221 127 aaKnown RBP4.6□□□□□ -1.67
RGD1YBR260C YDR274CP87283 123 aa4.6□□□□□ -1.67
RGD1YBR260C YGR121W-AQ3E816 71 aa4.6□□□□□ -1.67
RGD1YBR260C IRA2P19158 3079 aa4.59□□□□□ -1.67
RGD1YBR260C QCR8P08525 94 aa4.59□□□□□ -1.67
RGD1YBR260C YKL097CP34245 136 aa4.58□□□□□ -1.68
RGD1YBR260C SMD1Q02260 146 aaPredicted RBP4.58□□□□□ -1.68
RGD1YBR260C SPG4Q04438 115 aa4.58□□□□□ -1.68
RGD1YBR260C YLR162WQ06235 118 aa4.58□□□□□ -1.68
RGD1YBR260C YLR236CA0A023PZG4 107 aa4.58□□□□□ -1.68
RGD1YBR260C YAL065CO13511 128 aa4.58□□□□□ -1.68
RGD1YBR260C MPC3P53311 146 aa4.58□□□□□ -1.68
RGD1YBR260C YFR035CP43608 114 aa4.57□□□□□ -1.68
RGD1YBR260C RSM18P40033 138 aa4.56□□□□□ -1.68
RGD1YBR260C ATP18P81450 59 aa4.56□□□□□ -1.68
RGD1YBR260C YHL037CP38733 133 aa4.55□□□□□ -1.68
RGD1YBR260C YHL005CP38752 130 aa4.55□□□□□ -1.68
RGD1YBR260C YOR314WQ12506 109 aa4.55□□□□□ -1.68
RGD1YBR260C HHF1P02309 103 aaKnown RBP4.55□□□□□ -1.68
RGD1YBR260C RPB9P27999 122 aa4.54□□□□□ -1.68
RGD1YBR260C POR2P40478 281 aa4.54□□□□□ -1.68
RGD1YBR260C YOL166W-AQ8TGJ1 51 aa4.54□□□□□ -1.68
RGD1YBR260C DIF1O13577 133 aa4.53□□□□□ -1.68
RGD1YBR260C YFR009W-AP0C5M9 85 aa4.53□□□□□ -1.68
RGD1YBR260C YIR020CP40575 100 aa4.53□□□□□ -1.68
RGD1YBR260C YLL006W-AQ3E814 58 aa4.53□□□□□ -1.68
RGD1YBR260C YGR035W-AQ45U48 73 aa4.53□□□□□ -1.68
RGD1YBR260C RPL36BO14455 100 aaKnown RBP4.52□□□□□ -1.69
RGD1YBR260C RPL36AP05745 100 aaPredicted RBP4.52□□□□□ -1.69
RGD1YBR260C RPS30AP0CX33 63 aaKnown RBP4.52□□□□□ -1.69
RGD1YBR260C RPS30BP0CX34 63 aaKnown RBP4.52□□□□□ -1.69
RGD1YBR260C UTH1P36135 365 aa4.52□□□□□ -1.69
RGD1YBR260C SED1Q01589 338 aa4.52□□□□□ -1.69
RGD1YBR260C YOR032W-AQ8TGS1 66 aa4.52□□□□□ -1.69
RGD1YBR260C RPS23AP0CX29 145 aaKnown RBP4.51□□□□□ -1.69
RGD1YBR260C RPS23BP0CX30 145 aa4.51□□□□□ -1.69
RGD1YBR260C YMR122CQ03879 124 aa4.51□□□□□ -1.69
RGD1YBR260C RPR2P40571 144 aa4.51□□□□□ -1.69
RGD1YBR260C CRC1Q12289 327 aa4.51□□□□□ -1.69
RGD1YBR260C YOR011W-AQ3E807 68 aa4.51□□□□□ -1.69
RGD1YBR260C YOR020W-AQ3E824 90 aa4.51□□□□□ -1.69
RGD1YBR260C TDA2P40045 126 aa4.5□□□□□ -1.69
RGD1YBR260C YGR045CP53229 120 aa4.5□□□□□ -1.69
RGD1YBR260C YPR013CQ12145 317 aa4.5□□□□□ -1.69
RGD1YBR260C YDR182W-AQ3E796 67 aa4.5□□□□□ -1.69
RGD1YBR260C YER188C-AP0C0V2 99 aa4.49□□□□□ -1.69
RGD1YBR260C YEL045CP32616 141 aa4.49□□□□□ -1.69
RGD1YBR260C YBR219CP38317 127 aa4.49□□□□□ -1.69
RGD1YBR260C COX14P39103 70 aa4.49□□□□□ -1.69
RGD1YBR260C CCW12Q12127 133 aa4.48□□□□□ -1.69
RGD1YBR260C OST5Q92316 86 aa4.48□□□□□ -1.69
RGD1YBR260C YER135CP40082 130 aa4.48□□□□□ -1.69
RGD1YBR260C HOT13P36078 116 aa4.47□□□□□ -1.69
RGD1YBR260C YPR153WQ06537 140 aa4.47□□□□□ -1.69
RGD1YBR260C YOL014WQ08110 124 aa4.47□□□□□ -1.69
RGD1YBR260C VAM10Q08474 114 aa4.46□□□□□ -1.7
RGD1YBR260C YML100W-AQ8TGT0 57 aa4.45□□□□□ -1.7
RGD1YBR260C YBR144CP34215 104 aa4.45□□□□□ -1.7
RGD1YBR260C TOS8P53147 276 aa4.45□□□□□ -1.7
RGD1YBR260C YCL048W-AQ2V2Q2 79 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms