RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W TY1B-BLQ12490 1755 aa-0.83□□□□□ -2.54
SGF11YPL047W YRF1-2P40105 1681 aa-0.84□□□□□ -2.54
SGF11YPL047W YHR138CP38841 114 aaPredicted RBP-0.84□□□□□ -2.54
SGF11YPL047W PAU15P40585 124 aa-0.84□□□□□ -2.54
SGF11YPL047W MRPL38P35996 138 aaPredicted RBP-0.85□□□□□ -2.55
SGF11YPL047W RSM18P40033 138 aa-0.85□□□□□ -2.55
SGF11YPL047W RPL38P49167 78 aaKnown RBP-0.85□□□□□ -2.55
SGF11YPL047W YDR210WQ03482 75 aa-0.85□□□□□ -2.55
SGF11YPL047W ICY1Q04329 127 aa-0.85□□□□□ -2.55
SGF11YPL047W SMD2Q06217 110 aaKnown RBP-0.85□□□□□ -2.55
SGF11YPL047W CAT8P39113 1433 aa-0.86□□□□□ -2.55
SGF11YPL047W SRB6P32570 121 aa-0.86□□□□□ -2.55
SGF11YPL047W GTT1P40582 234 aa-0.86□□□□□ -2.55
SGF11YPL047W PAU20Q08322 120 aa-0.86□□□□□ -2.55
SGF11YPL047W SEN1Q00416 2231 aaKnown RBP-0.87□□□□□ -2.55
SGF11YPL047W PAU16P35994 123 aa-0.87□□□□□ -2.55
SGF11YPL047W YBR292CP38357 123 aa-0.87□□□□□ -2.55
SGF11YPL047W TIM8P57744 87 aa-0.87□□□□□ -2.55
SGF11YPL047W NKP2Q06162 153 aa-0.87□□□□□ -2.55
SGF11YPL047W YDR246W-AQ3E763 66 aa-0.87□□□□□ -2.55
SGF11YPL047W RPB11P38902 120 aa-0.88□□□□□ -2.55
SGF11YPL047W SSN2P38931 1420 aa-0.89□□□□□ -2.55
SGF11YPL047W YCR099CP25657 155 aa-0.89□□□□□ -2.55
SGF11YPL047W PDX3P38075 228 aaKnown RBP-0.89□□□□□ -2.55
SGF11YPL047W YGL204CP53089 101 aa-0.89□□□□□ -2.55
SGF11YPL047W SNA2P56508 79 aa-0.89□□□□□ -2.55
SGF11YPL047W YDR278CQ05612 105 aa-0.89□□□□□ -2.55
SGF11YPL047W MRP17P28778 131 aa-0.9□□□□□ -2.55
SGF11YPL047W MRP49P32388 137 aa-0.9□□□□□ -2.55
SGF11YPL047W YLR365WQ7LIF2 110 aa-0.9□□□□□ -2.55
SGF11YPL047W MYO2P19524 1574 aaKnown RBP-0.91□□□□□ -2.55
SGF11YPL047W SRB8P25648 1427 aa-0.91□□□□□ -2.56
SGF11YPL047W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.92□□□□□ -2.56
SGF11YPL047W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.92□□□□□ -2.56
SGF11YPL047W PAU6P0CE90 120 aa-0.92□□□□□ -2.56
SGF11YPL047W PAU18P0CE91 120 aa-0.92□□□□□ -2.56
SGF11YPL047W YCR095W-AQ3E787 52 aa-0.92□□□□□ -2.56
SGF11YPL047W YNR034W-AQ3E841 98 aa-0.92□□□□□ -2.56
SGF11YPL047W BUD23P25627 275 aaPredicted RBP-0.93□□□□□ -2.56
SGF11YPL047W YAR029WP39549 74 aa-0.93□□□□□ -2.56
SGF11YPL047W YLR118CQ12354 227 aa-0.93□□□□□ -2.56
SGF11YPL047W BUD4P47136 1447 aa-0.93□□□□□ -2.56
SGF11YPL047W PMD1P32634 1753 aa-0.93□□□□□ -2.56
SGF11YPL047W PAU1P0CE88 120 aa-0.94□□□□□ -2.56
SGF11YPL047W PAU14P0CE89 120 aa-0.94□□□□□ -2.56
SGF11YPL047W PAU8P0CE92 120 aa-0.94□□□□□ -2.56
SGF11YPL047W PAU11P0CE93 120 aa-0.94□□□□□ -2.56
SGF11YPL047W PAU13P38725 120 aa-0.94□□□□□ -2.56
SGF11YPL047W VMA21P41806 77 aa-0.94□□□□□ -2.56
SGF11YPL047W PAU10Q03050 120 aa-0.94□□□□□ -2.56
SGF11YPL047W PAU9Q3E770 120 aa-0.94□□□□□ -2.56
SGF11YPL047W YLR361C-AQ3E795 98 aa-0.94□□□□□ -2.56
SGF11YPL047W YLR419WQ06698 1435 aaKnown RBP-0.95□□□□□ -2.56
SGF11YPL047W MIX14Q04341 121 aa-0.95□□□□□ -2.56
SGF11YPL047W YLR099W-AQ3E798 87 aa-0.95□□□□□ -2.56
SGF11YPL047W COX7P10174 60 aa-0.96□□□□□ -2.56
SGF11YPL047W HUR1P45820 110 aa-0.96□□□□□ -2.56
SGF11YPL047W YGR025WP53216 100 aa-0.97□□□□□ -2.56
SGF11YPL047W YLR042CQ07990 161 aa-0.97□□□□□ -2.56
SGF11YPL047W RTR2Q12378 196 aa-0.97□□□□□ -2.56
SGF11YPL047W Q0032Q9ZZX7 96 aa-0.97□□□□□ -2.56
SGF11YPL047W ECM12O13529 151 aa-0.98□□□□□ -2.57
SGF11YPL047W YBL071CP38185 102 aa-0.98□□□□□ -2.57
SGF11YPL047W VMA7P39111 118 aa-0.98□□□□□ -2.57
SGF11YPL047W AIM19P40502 157 aa-0.98□□□□□ -2.57
SGF11YPL047W RPS29AP41057 56 aaKnown RBP-0.98□□□□□ -2.57
SGF11YPL047W DYN2Q02647 92 aa-0.98□□□□□ -2.57
SGF11YPL047W TLG1Q03322 224 aa-0.98□□□□□ -2.57
SGF11YPL047W PAU4P53427 120 aa-0.99□□□□□ -2.57
SGF11YPL047W APS2Q00381 147 aa-0.99□□□□□ -2.57
SGF11YPL047W YRF1-1P0CX20 1796 aa-0.99□□□□□ -2.57
SGF11YPL047W YRF1-5P0CX21 1796 aa-0.99□□□□□ -2.57
SGF11YPL047W YRF1-8P0CX22 1796 aa-0.99□□□□□ -2.57
SGF11YPL047W ROX3P25046 220 aa-1□□□□□ -2.57
SGF11YPL047W RGI1P40043 161 aaPredicted RBP-1□□□□□ -2.57
SGF11YPL047W PAU5P43575 122 aa-1□□□□□ -2.57
SGF11YPL047W SWC7Q06707 132 aa-1□□□□□ -2.57
SGF11YPL047W YNL042W-BQ3E7Z2 85 aa-1□□□□□ -2.57
SGF11YPL047W HKR1P41809 1802 aa-1.01□□□□□ -2.57
SGF11YPL047W YBR201C-AQ2V2Q3 67 aa-1.02□□□□□ -2.57
SGF11YPL047W NTE1Q04958 1679 aa-1.03□□□□□ -2.57
SGF11YPL047W SPC2Q04969 178 aa-1.03□□□□□ -2.57
SGF11YPL047W YMR001C-AQ8TGS9 76 aa-1.03□□□□□ -2.57
SGF11YPL047W MIC10Q96VH5 97 aa-1.03□□□□□ -2.57
SGF11YPL047W TOM6P33448 61 aa-1.04□□□□□ -2.58
SGF11YPL047W SDH6Q3E785 79 aa-1.04□□□□□ -2.58
SGF11YPL047W KRE5P22023 1365 aa-1.05□□□□□ -2.58
SGF11YPL047W SPC1P46965 94 aa-1.05□□□□□ -2.58
SGF11YPL047W TOR1P35169 2470 aa-1.05□□□□□ -2.58
SGF11YPL047W BPH1P25356 2167 aa-1.06□□□□□ -2.58
SGF11YPL047W QCR6P00127 147 aa-1.06□□□□□ -2.58
SGF11YPL047W YBL044WP38194 122 aa-1.06□□□□□ -2.58
SGF11YPL047W YHR214C-DP0CX93 97 aa-1.07□□□□□ -2.58
SGF11YPL047W YOS1Q3E834 85 aa-1.07□□□□□ -2.58
SGF11YPL047W NHP10Q03435 203 aa-1.08□□□□□ -2.58
SGF11YPL047W GNA1P43577 159 aaPredicted RBP-1.09□□□□□ -2.58
SGF11YPL047W TY1B-BRQ12193 1756 aa-1.09□□□□□ -2.58
SGF11YPL047W LYS2P07702 1392 aa-1.1□□□□□ -2.59
SGF11YPL047W ATP18P81450 59 aa-1.11□□□□□ -2.59
SGF11YPL047W EDC1P53080 175 aaPredicted RBP-1.12□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms