RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W GEA1P47102 1408 aaPredicted RBP1.49□□□□□ -2.17
HSH49YOR319W YJR128WP47162 119 aa1.49□□□□□ -2.17
HSH49YOR319W MRPS12P53732 153 aa1.49□□□□□ -2.17
HSH49YOR319W YOR034C-AQ3E735 80 aa1.49□□□□□ -2.17
HSH49YOR319W LCL1Q02786 101 aa1.48□□□□□ -2.17
HSH49YOR319W SEC7P11075 2009 aaKnown RBP1.48□□□□□ -2.17
HSH49YOR319W YOL118CQ08259 102 aa1.47□□□□□ -2.17
HSH49YOR319W YPL225WQ08971 146 aaKnown RBP1.47□□□□□ -2.17
HSH49YOR319W GEA2P39993 1459 aaKnown RBP1.46□□□□□ -2.18
HSH49YOR319W ZEO1Q08245 113 aa1.46□□□□□ -2.18
HSH49YOR319W REV3P14284 1504 aa1.45□□□□□ -2.18
HSH49YOR319W IMP2P46972 177 aa1.45□□□□□ -2.18
HSH49YOR319W SEC16P48415 2195 aaKnown RBP1.44□□□□□ -2.18
HSH49YOR319W MIX14Q04341 121 aa1.44□□□□□ -2.18
HSH49YOR319W TOP2P06786 1428 aaKnown RBP1.42□□□□□ -2.18
HSH49YOR319W CAT8P39113 1433 aa1.42□□□□□ -2.18
HSH49YOR319W RSM19P53733 91 aaPredicted RBP1.42□□□□□ -2.18
HSH49YOR319W CCW14O13547 238 aa1.41□□□□□ -2.18
HSH49YOR319W KSH1Q8TGJ3 72 aa1.41□□□□□ -2.18
HSH49YOR319W MYO1P08964 1928 aa1.4□□□□□ -2.18
HSH49YOR319W YCR095W-AQ3E787 52 aa1.4□□□□□ -2.19
HSH49YOR319W YPL038W-AQ3E7B4 63 aa1.4□□□□□ -2.19
HSH49YOR319W YLR307C-AQ3E825 87 aa1.4□□□□□ -2.19
HSH49YOR319W URA2P07259 2214 aaKnown RBP1.4□□□□□ -2.19
HSH49YOR319W BPT1P14772 1559 aa1.39□□□□□ -2.19
HSH49YOR319W TY4B-HP0C2J7 1802 aa1.39□□□□□ -2.19
HSH49YOR319W YLR157W-EP0CF00 54 aa1.38□□□□□ -2.19
HSH49YOR319W SNA2P56508 79 aa1.38□□□□□ -2.19
HSH49YOR319W YIL086CP40503 102 aa1.37□□□□□ -2.19
HSH49YOR319W PAU5P43575 122 aa1.37□□□□□ -2.19
HSH49YOR319W ROX3P25046 220 aa1.36□□□□□ -2.19
HSH49YOR319W YDR210WQ03482 75 aa1.36□□□□□ -2.19
HSH49YOR319W YOR289WQ12012 251 aaPredicted RBP1.36□□□□□ -2.19
HSH49YOR319W RPA190P10964 1664 aaKnown RBP1.35□□□□□ -2.19
HSH49YOR319W NTE1Q04958 1679 aa1.35□□□□□ -2.19
HSH49YOR319W YLR255CO13574 117 aa1.35□□□□□ -2.19
HSH49YOR319W SHU1P38751 150 aa1.35□□□□□ -2.19
HSH49YOR319W COX12Q01519 83 aa1.35□□□□□ -2.19
HSH49YOR319W SRB8P25648 1427 aa1.34□□□□□ -2.19
HSH49YOR319W YHL005CP38752 130 aa1.34□□□□□ -2.19
HSH49YOR319W EMC5P40540 141 aa1.34□□□□□ -2.19
HSH49YOR319W BRR2P32639 2163 aaKnown RBP1.34□□□□□ -2.2
HSH49YOR319W RSF2P46974 1380 aa1.34□□□□□ -2.2
HSH49YOR319W GCV3P39726 170 aaPredicted RBP1.33□□□□□ -2.2
HSH49YOR319W MRX7P53869 86 aa1.33□□□□□ -2.2
HSH49YOR319W BNI1P41832 1953 aa1.33□□□□□ -2.2
HSH49YOR319W YRF1-1P0CX20 1796 aa1.32□□□□□ -2.2
HSH49YOR319W YRF1-5P0CX21 1796 aa1.32□□□□□ -2.2
HSH49YOR319W YRF1-8P0CX22 1796 aa1.32□□□□□ -2.2
HSH49YOR319W HMRA1P0CY11 126 aa1.32□□□□□ -2.2
HSH49YOR319W MSL1P40567 111 aaPredicted RBP1.32□□□□□ -2.2
HSH49YOR319W MRP17P28778 131 aa1.31□□□□□ -2.2
HSH49YOR319W AUA1P32450 94 aa1.31□□□□□ -2.2
HSH49YOR319W YHR173CP38864 112 aa1.31□□□□□ -2.2
HSH49YOR319W COX19Q3E731 98 aa1.31□□□□□ -2.2
HSH49YOR319W YBR072C-AQ3E794 53 aa1.31□□□□□ -2.2
HSH49YOR319W PAU6P0CE90 120 aa1.3□□□□□ -2.2
HSH49YOR319W PAU18P0CE91 120 aa1.3□□□□□ -2.2
HSH49YOR319W MPC2P38857 129 aa1.3□□□□□ -2.2
HSH49YOR319W YBL071CP38185 102 aa1.29□□□□□ -2.2
HSH49YOR319W RRT15Q3E811 62 aa1.29□□□□□ -2.2
HSH49YOR319W YDR010CQ12426 110 aa1.28□□□□□ -2.2
HSH49YOR319W SSN2P38931 1420 aa1.28□□□□□ -2.2
HSH49YOR319W POL2P21951 2222 aaKnown RBP1.28□□□□□ -2.2
HSH49YOR319W ICY1Q04329 127 aa1.27□□□□□ -2.21
HSH49YOR319W PAU20Q08322 120 aa1.27□□□□□ -2.21
HSH49YOR319W YDR029WQ12111 104 aa1.27□□□□□ -2.21
HSH49YOR319W YNR034W-AQ3E841 98 aa1.27□□□□□ -2.21
HSH49YOR319W NHP10Q03435 203 aa1.26□□□□□ -2.21
HSH49YOR319W SUS1Q6WNK7 96 aa1.26□□□□□ -2.21
HSH49YOR319W PDR10P51533 1564 aa1.25□□□□□ -2.21
HSH49YOR319W YBR292CP38357 123 aa1.25□□□□□ -2.21
HSH49YOR319W AIM19P40502 157 aa1.25□□□□□ -2.21
HSH49YOR319W SPC1P46965 94 aa1.25□□□□□ -2.21
HSH49YOR319W YCL001W-BQ96VH2 84 aa1.25□□□□□ -2.21
HSH49YOR319W PAU1P0CE88 120 aa1.24□□□□□ -2.21
HSH49YOR319W PAU14P0CE89 120 aa1.24□□□□□ -2.21
HSH49YOR319W PAU8P0CE92 120 aa1.24□□□□□ -2.21
HSH49YOR319W PAU11P0CE93 120 aa1.24□□□□□ -2.21
HSH49YOR319W PAU13P38725 120 aa1.24□□□□□ -2.21
HSH49YOR319W RSM18P40033 138 aa1.24□□□□□ -2.21
HSH49YOR319W PAU10Q03050 120 aa1.24□□□□□ -2.21
HSH49YOR319W PAU9Q3E770 120 aa1.24□□□□□ -2.21
HSH49YOR319W BLM10P43583 2143 aa1.24□□□□□ -2.21
HSH49YOR319W MRPL38P35996 138 aaPredicted RBP1.23□□□□□ -2.21
HSH49YOR319W SNU13P39990 126 aaKnown RBP1.23□□□□□ -2.21
HSH49YOR319W YCR075W-AQ3E830 75 aa1.23□□□□□ -2.21
HSH49YOR319W SWR1Q05471 1514 aa1.22□□□□□ -2.21
HSH49YOR319W PAU4P53427 120 aa1.22□□□□□ -2.21
HSH49YOR319W RIM15P43565 1770 aa1.21□□□□□ -2.22
HSH49YOR319W PRP8P33334 2413 aaKnown RBP1.21□□□□□ -2.22
HSH49YOR319W RPS11AP0CX47 156 aaKnown RBP1.2□□□□□ -2.22
HSH49YOR319W RPS11BP0CX48 156 aaKnown RBP1.2□□□□□ -2.22
HSH49YOR319W YDR042CQ03205 200 aa1.2□□□□□ -2.22
HSH49YOR319W MHF2Q3E829 80 aa1.2□□□□□ -2.22
HSH49YOR319W SNF2P22082 1703 aa1.19□□□□□ -2.22
HSH49YOR319W YRF1-2P40105 1681 aa1.19□□□□□ -2.22
HSH49YOR319W TY1B-BLQ12490 1755 aa1.19□□□□□ -2.22
HSH49YOR319W FAS2P19097 1887 aaKnown RBP1.18□□□□□ -2.22
HSH49YOR319W SKI3P17883 1432 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms