RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W IMP2P46972 177 aa0.42□□□□□ -2.34
SLX4YLR135W RPS12P48589 143 aaKnown RBP0.42□□□□□ -2.34
SLX4YLR135W MYO1P08964 1928 aa0.42□□□□□ -2.34
SLX4YLR135W MDS3P53094 1487 aa0.42□□□□□ -2.34
SLX4YLR135W FAS2P19097 1887 aaKnown RBP0.42□□□□□ -2.34
SLX4YLR135W YLR419WQ06698 1435 aaKnown RBP0.42□□□□□ -2.34
SLX4YLR135W SNF2P22082 1703 aa0.42□□□□□ -2.34
SLX4YLR135W LYS2P07702 1392 aa0.41□□□□□ -2.34
SLX4YLR135W SHU1P38751 150 aa0.41□□□□□ -2.34
SLX4YLR135W RGI1P40043 161 aaPredicted RBP0.41□□□□□ -2.34
SLX4YLR135W YMR090WQ04304 227 aaKnown RBP0.41□□□□□ -2.34
SLX4YLR135W YMR103CQ04436 120 aa0.41□□□□□ -2.34
SLX4YLR135W YPL038W-AQ3E7B4 63 aa0.41□□□□□ -2.34
SLX4YLR135W MIC10Q96VH5 97 aa0.41□□□□□ -2.34
SLX4YLR135W TAO3P40468 2376 aa0.41□□□□□ -2.34
SLX4YLR135W KRE5P22023 1365 aa0.4□□□□□ -2.34
SLX4YLR135W YCR101CP25607 182 aa0.4□□□□□ -2.35
SLX4YLR135W YIL086CP40503 102 aa0.4□□□□□ -2.35
SLX4YLR135W YDR010CQ12426 110 aa0.4□□□□□ -2.35
SLX4YLR135W YBR072C-AQ3E794 53 aa0.4□□□□□ -2.35
SLX4YLR135W YOS1Q3E834 85 aa0.4□□□□□ -2.35
SLX4YLR135W GCV3P39726 170 aaPredicted RBP0.4□□□□□ -2.35
SLX4YLR135W YLR255CO13574 117 aa0.39□□□□□ -2.35
SLX4YLR135W TOP2P06786 1428 aaKnown RBP0.39□□□□□ -2.35
SLX4YLR135W TSC11P40061 1430 aa0.39□□□□□ -2.35
SLX4YLR135W SNA2P56508 79 aa0.39□□□□□ -2.35
SLX4YLR135W YCR095W-AQ3E787 52 aa0.39□□□□□ -2.35
SLX4YLR135W YOL164W-AQ3E7A5 60 aa0.39□□□□□ -2.35
SLX4YLR135W PDR11P40550 1411 aa0.38□□□□□ -2.35
SLX4YLR135W UBC4P15731 148 aa0.38□□□□□ -2.35
SLX4YLR135W CCW14O13547 238 aa0.38□□□□□ -2.35
SLX4YLR135W RPA12P32529 125 aaKnown RBP0.38□□□□□ -2.35
SLX4YLR135W YBR090CP38253 122 aa0.38□□□□□ -2.35
SLX4YLR135W PAU5P43575 122 aa0.38□□□□□ -2.35
SLX4YLR135W RSM19P53733 91 aaPredicted RBP0.38□□□□□ -2.35
SLX4YLR135W MRX7P53869 86 aa0.38□□□□□ -2.35
SLX4YLR135W COX12Q01519 83 aa0.38□□□□□ -2.35
SLX4YLR135W FYV7Q12247 151 aa0.38□□□□□ -2.35
SLX4YLR135W TY3B-IQ7LHG5 1498 aaKnown RBP0.38□□□□□ -2.35
SLX4YLR135W YRF1-1P0CX20 1796 aa0.37□□□□□ -2.35
SLX4YLR135W YRF1-5P0CX21 1796 aa0.37□□□□□ -2.35
SLX4YLR135W YRF1-8P0CX22 1796 aa0.37□□□□□ -2.35
SLX4YLR135W MPC2P38857 129 aa0.37□□□□□ -2.35
SLX4YLR135W UBC5P15732 148 aa0.37□□□□□ -2.35
SLX4YLR135W YDR210WQ03482 75 aa0.37□□□□□ -2.35
SLX4YLR135W PAU20Q08322 120 aa0.37□□□□□ -2.35
SLX4YLR135W SRB8P25648 1427 aa0.36□□□□□ -2.35
SLX4YLR135W PAU6P0CE90 120 aa0.36□□□□□ -2.35
SLX4YLR135W PAU18P0CE91 120 aa0.36□□□□□ -2.35
SLX4YLR135W ROX3P25046 220 aa0.36□□□□□ -2.35
SLX4YLR135W MRP17P28778 131 aa0.36□□□□□ -2.35
SLX4YLR135W RPS29BP41058 56 aaKnown RBP0.36□□□□□ -2.35
SLX4YLR135W COX19Q3E731 98 aa0.36□□□□□ -2.35
SLX4YLR135W GEA1P47102 1408 aaPredicted RBP0.36□□□□□ -2.35
SLX4YLR135W RIM15P43565 1770 aa0.36□□□□□ -2.35
SLX4YLR135W YBL071CP38185 102 aa0.36□□□□□ -2.35
SLX4YLR135W MIX14Q04341 121 aa0.36□□□□□ -2.35
SLX4YLR135W BUD4P47136 1447 aa0.35□□□□□ -2.35
SLX4YLR135W NTE1Q04958 1679 aa0.35□□□□□ -2.35
SLX4YLR135W ICY1Q04329 127 aa0.35□□□□□ -2.35
SLX4YLR135W YNR034W-AQ3E841 98 aa0.35□□□□□ -2.35
SLX4YLR135W REV3P14284 1504 aa0.34□□□□□ -2.35
SLX4YLR135W SSN2P38931 1420 aa0.34□□□□□ -2.35
SLX4YLR135W GEA2P39993 1459 aaKnown RBP0.34□□□□□ -2.35
SLX4YLR135W CAT8P39113 1433 aa0.34□□□□□ -2.36
SLX4YLR135W PAU1P0CE88 120 aa0.34□□□□□ -2.36
SLX4YLR135W PAU14P0CE89 120 aa0.34□□□□□ -2.36
SLX4YLR135W PAU8P0CE92 120 aa0.34□□□□□ -2.36
SLX4YLR135W PAU11P0CE93 120 aa0.34□□□□□ -2.36
SLX4YLR135W RPS11AP0CX47 156 aaKnown RBP0.34□□□□□ -2.36
SLX4YLR135W RPS11BP0CX48 156 aaKnown RBP0.34□□□□□ -2.36
SLX4YLR135W HMRA1P0CY11 126 aa0.34□□□□□ -2.36
SLX4YLR135W YBR292CP38357 123 aa0.34□□□□□ -2.36
SLX4YLR135W PAU13P38725 120 aa0.34□□□□□ -2.36
SLX4YLR135W EMC5P40540 141 aa0.34□□□□□ -2.36
SLX4YLR135W PAU10Q03050 120 aa0.34□□□□□ -2.36
SLX4YLR135W ZEO1Q08245 113 aa0.34□□□□□ -2.36
SLX4YLR135W YOR289WQ12012 251 aaPredicted RBP0.34□□□□□ -2.36
SLX4YLR135W PAU9Q3E770 120 aa0.34□□□□□ -2.36
SLX4YLR135W KSH1Q8TGJ3 72 aa0.34□□□□□ -2.36
SLX4YLR135W BPT1P14772 1559 aa0.33□□□□□ -2.36
SLX4YLR135W TY1B-BLQ12490 1755 aa0.33□□□□□ -2.36
SLX4YLR135W SPC1P46965 94 aa0.33□□□□□ -2.36
SLX4YLR135W MRPL38P35996 138 aaPredicted RBP0.33□□□□□ -2.36
SLX4YLR135W AIM19P40502 157 aa0.33□□□□□ -2.36
SLX4YLR135W PAU4P53427 120 aa0.33□□□□□ -2.36
SLX4YLR135W NHP10Q03435 203 aa0.33□□□□□ -2.36
SLX4YLR135W YPL225WQ08971 146 aaKnown RBP0.33□□□□□ -2.36
SLX4YLR135W RSF2P46974 1380 aa0.32□□□□□ -2.36
SLX4YLR135W RPA190P10964 1664 aaKnown RBP0.32□□□□□ -2.36
SLX4YLR135W YRF1-2P40105 1681 aa0.32□□□□□ -2.36
SLX4YLR135W YHL005CP38752 130 aa0.32□□□□□ -2.36
SLX4YLR135W RSM18P40033 138 aa0.32□□□□□ -2.36
SLX4YLR135W MSL1P40567 111 aaPredicted RBP0.32□□□□□ -2.36
SLX4YLR135W RRT15Q3E811 62 aa0.32□□□□□ -2.36
SLX4YLR135W SNU13P39990 126 aaKnown RBP0.31□□□□□ -2.36
SLX4YLR135W YNL190WP53872 204 aa0.31□□□□□ -2.36
SLX4YLR135W YNL198CP40166 100 aa0.3□□□□□ -2.36
SLX4YLR135W RPC10P40422 70 aa0.3□□□□□ -2.36
SLX4YLR135W SUS1Q6WNK7 96 aa0.3□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms