RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE1YLR007W YOL118CQ08259 102 aa2.64□□□□□ -1.99
NSE1YLR007W YNL146C-AQ3E7Z1 64 aa2.64□□□□□ -1.99
NSE1YLR007W YHR213W-AQ8TGT4 77 aa2.64□□□□□ -1.99
NSE1YLR007W HMRA2P0CY13 119 aa2.63□□□□□ -1.99
NSE1YLR007W YCL042WP25572 119 aa2.63□□□□□ -1.99
NSE1YLR007W PAU5P43575 122 aa2.63□□□□□ -1.99
NSE1YLR007W IMP2P46972 177 aa2.63□□□□□ -1.99
NSE1YLR007W COA4Q05809 96 aa2.63□□□□□ -1.99
NSE1YLR007W YHR086W-AQ3E746 53 aa2.63□□□□□ -1.99
NSE1YLR007W RPO31P04051 1460 aa2.63□□□□□ -1.99
NSE1YLR007W MLP1Q02455 1875 aaKnown RBP2.62□□□□□ -1.99
NSE1YLR007W YFL065CP43539 102 aa2.62□□□□□ -1.99
NSE1YLR007W YLR162WQ06235 118 aa2.62□□□□□ -1.99
NSE1YLR007W LSM6Q06406 86 aaKnown RBP2.62□□□□□ -1.99
NSE1YLR007W PRM3Q08931 133 aa2.62□□□□□ -1.99
NSE1YLR007W YPR203WQ08994 102 aa2.62□□□□□ -1.99
NSE1YLR007W POC4Q12245 148 aaPredicted RBP2.62□□□□□ -1.99
NSE1YLR007W COA3Q3E7B2 85 aa2.62□□□□□ -1.99
NSE1YLR007W NUP159P40477 1460 aa2.62□□□□□ -1.99
NSE1YLR007W UBR2Q07963 1872 aa2.62□□□□□ -1.99
NSE1YLR007W YIL163CP40448 117 aa2.61□□□□□ -1.99
NSE1YLR007W ICS3P47034 131 aa2.61□□□□□ -1.99
NSE1YLR007W IRC21Q04772 201 aa2.61□□□□□ -1.99
NSE1YLR007W YLR285C-AQ3E771 56 aa2.61□□□□□ -1.99
NSE1YLR007W ACC1Q00955 2233 aaKnown RBP2.61□□□□□ -1.99
NSE1YLR007W CYR1P08678 2026 aaKnown RBP2.6□□□□□ -1.99
NSE1YLR007W RPS22AP0C0W1 130 aaKnown RBP2.6□□□□□ -1.99
NSE1YLR007W TOM6P33448 61 aa2.6□□□□□ -1.99
NSE1YLR007W MHF2Q3E829 80 aa2.6□□□□□ -1.99
NSE1YLR007W YSF3P0C074 85 aaPredicted RBP2.59□□□□□ -1.99
NSE1YLR007W AIM4P38305 123 aaPredicted RBP2.59□□□□□ -1.99
NSE1YLR007W YCR095W-AQ3E787 52 aa2.59□□□□□ -1.99
NSE1YLR007W TCB3Q03640 1545 aaKnown RBP2.58□□□□□ -2
NSE1YLR007W CCW14O13547 238 aa2.58□□□□□ -2
NSE1YLR007W VPS55P47111 140 aa2.58□□□□□ -2
NSE1YLR007W YGL041C-BQ3E750 60 aa2.58□□□□□ -2
NSE1YLR007W POL1P13382 1468 aa2.58□□□□□ -2
NSE1YLR007W LSM2P38203 95 aaKnown RBP2.57□□□□□ -2
NSE1YLR007W FAS2P19097 1887 aaKnown RBP2.56□□□□□ -2
NSE1YLR007W MRP17P28778 131 aa2.56□□□□□ -2
NSE1YLR007W SNA2P56508 79 aa2.56□□□□□ -2
NSE1YLR007W SIN3P22579 1536 aa2.56□□□□□ -2
NSE1YLR007W YJL009WP47078 108 aa2.55□□□□□ -2
NSE1YLR007W MMS22Q06164 1454 aa2.55□□□□□ -2
NSE1YLR007W YOR343CQ12484 108 aa2.55□□□□□ -2
NSE1YLR007W TY4B-JP47024 1803 aa2.54□□□□□ -2
NSE1YLR007W NTE1Q04958 1679 aa2.54□□□□□ -2
NSE1YLR007W PAI3P01094 68 aa2.54□□□□□ -2
NSE1YLR007W MRPL38P35996 138 aaPredicted RBP2.54□□□□□ -2
NSE1YLR007W CCW12Q12127 133 aa2.53□□□□□ -2
NSE1YLR007W RPS22BQ3E7Y3 130 aaKnown RBP2.53□□□□□ -2
NSE1YLR007W DOP1Q03921 1698 aa2.53□□□□□ -2
NSE1YLR007W NHP2P32495 156 aaPredicted RBP2.52□□□□□ -2.01
NSE1YLR007W YDR119W-AQ2V2P9 66 aa2.52□□□□□ -2.01
NSE1YLR007W SLH1P53327 1967 aaKnown RBP2.52□□□□□ -2.01
NSE1YLR007W XRN1P22147 1528 aaKnown RBP2.52□□□□□ -2.01
NSE1YLR007W UFD4P33202 1483 aa2.52□□□□□ -2.01
NSE1YLR007W BRR2P32639 2163 aaKnown RBP2.51□□□□□ -2.01
NSE1YLR007W SRB8P25648 1427 aa2.51□□□□□ -2.01
NSE1YLR007W MIC27P50945 234 aa2.51□□□□□ -2.01
NSE1YLR007W YDR381C-AQ3E6R5 114 aa2.51□□□□□ -2.01
NSE1YLR007W YGR240C-AQ3E786 66 aa2.51□□□□□ -2.01
NSE1YLR007W SWM2P40342 146 aa2.5□□□□□ -2.01
NSE1YLR007W MRX7P53869 86 aa2.5□□□□□ -2.01
NSE1YLR007W YNL122CP53921 115 aaPredicted RBP2.5□□□□□ -2.01
NSE1YLR007W ECM29P38737 1868 aa2.5□□□□□ -2.01
NSE1YLR007W YHR214C-DP0CX93 97 aa2.49□□□□□ -2.01
NSE1YLR007W YBR013CP38215 129 aa2.49□□□□□ -2.01
NSE1YLR007W SPC1P46965 94 aa2.49□□□□□ -2.01
NSE1YLR007W COX12Q01519 83 aa2.49□□□□□ -2.01
NSE1YLR007W YDR210WQ03482 75 aa2.49□□□□□ -2.01
NSE1YLR007W LCL2Q08045 131 aa2.49□□□□□ -2.01
NSE1YLR007W SMC4Q12267 1418 aa2.49□□□□□ -2.01
NSE1YLR007W YBL071CP38185 102 aa2.48□□□□□ -2.01
NSE1YLR007W AIM19P40502 157 aa2.48□□□□□ -2.01
NSE1YLR007W MRPS12P53732 153 aa2.48□□□□□ -2.01
NSE1YLR007W YPL038W-AQ3E7B4 63 aa2.48□□□□□ -2.01
NSE1YLR007W TY1B-GR3Q12316 1755 aa2.48□□□□□ -2.01
NSE1YLR007W TY1B-ORQ92393 1755 aa2.48□□□□□ -2.01
NSE1YLR007W MON2P48563 1636 aaPredicted RBP2.46□□□□□ -2.02
NSE1YLR007W PAU6P0CE90 120 aa2.46□□□□□ -2.02
NSE1YLR007W PAU18P0CE91 120 aa2.46□□□□□ -2.02
NSE1YLR007W YKL065W-AQ2V2P2 73 aa2.46□□□□□ -2.02
NSE1YLR007W SCC2Q04002 1493 aa2.45□□□□□ -2.02
NSE1YLR007W MRPL31P14063 131 aaPredicted RBP2.45□□□□□ -2.02
NSE1YLR007W YOR072WQ08486 104 aa2.45□□□□□ -2.02
NSE1YLR007W YOR314WQ12506 109 aa2.45□□□□□ -2.02
NSE1YLR007W HFA1P32874 2273 aa2.44□□□□□ -2.02
NSE1YLR007W TY1B-DR5P0C2I2 1755 aa2.44□□□□□ -2.02
NSE1YLR007W TY1B-DR6P0C2I3 1755 aa2.44□□□□□ -2.02
NSE1YLR007W TY1B-LR2P0C2I5 1755 aa2.44□□□□□ -2.02
NSE1YLR007W TY1B-LR3P0C2I6 1755 aaKnown RBP2.44□□□□□ -2.02
NSE1YLR007W TY1B-PR1P0C2I9 1755 aaKnown RBP2.44□□□□□ -2.02
NSE1YLR007W TY1B-PR3P0C2J1 1755 aaKnown RBP2.44□□□□□ -2.02
NSE1YLR007W TY1B-JR1P47098 1755 aa2.44□□□□□ -2.02
NSE1YLR007W TY1B-ML2Q03434 1755 aaKnown RBP2.44□□□□□ -2.02
NSE1YLR007W TY1B-ER1Q03612 1755 aa2.44□□□□□ -2.02
NSE1YLR007W TY1B-ML1Q04711 1755 aaKnown RBP2.44□□□□□ -2.02
NSE1YLR007W TY1B-GR2Q12269 1755 aa2.44□□□□□ -2.02
NSE1YLR007W TY1B-OLQ12273 1755 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms