RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C YOL118CQ08259 102 aa-0.11□□□□□ -2.43
CMS1YLR003C NTE1Q04958 1679 aa-0.11□□□□□ -2.43
CMS1YLR003C YHR138CP38841 114 aaPredicted RBP-0.12□□□□□ -2.43
CMS1YLR003C MPC2P38857 129 aa-0.12□□□□□ -2.43
CMS1YLR003C HUR1P45820 110 aa-0.13□□□□□ -2.43
CMS1YLR003C APS2Q00381 147 aa-0.14□□□□□ -2.43
CMS1YLR003C YLR042CQ07990 161 aa-0.14□□□□□ -2.43
CMS1YLR003C RTR2Q12378 196 aa-0.14□□□□□ -2.43
CMS1YLR003C YIR021W-AQ3E739 70 aa-0.14□□□□□ -2.43
CMS1YLR003C RPO41P13433 1351 aaKnown RBP-0.15□□□□□ -2.43
CMS1YLR003C RPS11AP0CX47 156 aaKnown RBP-0.15□□□□□ -2.43
CMS1YLR003C RPS11BP0CX48 156 aaKnown RBP-0.15□□□□□ -2.43
CMS1YLR003C YGR164WP53291 111 aa-0.16□□□□□ -2.44
CMS1YLR003C SWC7Q06707 132 aa-0.16□□□□□ -2.44
CMS1YLR003C YCR101CP25607 182 aa-0.17□□□□□ -2.44
CMS1YLR003C SSN2P38931 1420 aa-0.17□□□□□ -2.44
CMS1YLR003C VMA21P41806 77 aa-0.17□□□□□ -2.44
CMS1YLR003C YPL038W-AQ3E7B4 63 aa-0.17□□□□□ -2.44
CMS1YLR003C SPP41P38904 1435 aa-0.18□□□□□ -2.44
CMS1YLR003C PAU15P40585 124 aa-0.18□□□□□ -2.44
CMS1YLR003C COX12Q01519 83 aa-0.18□□□□□ -2.44
CMS1YLR003C PAU16P35994 123 aa-0.19□□□□□ -2.44
CMS1YLR003C MRPL38P35996 138 aaPredicted RBP-0.2□□□□□ -2.44
CMS1YLR003C BUD23P25627 275 aaPredicted RBP-0.21□□□□□ -2.44
CMS1YLR003C WIP1Q2V2P8 89 aa-0.21□□□□□ -2.44
CMS1YLR003C SRB8P25648 1427 aa-0.21□□□□□ -2.44
CMS1YLR003C YER039C-AP0CD97 72 aa-0.22□□□□□ -2.44
CMS1YLR003C MRX7P53869 86 aa-0.22□□□□□ -2.44
CMS1YLR003C LYS2P07702 1392 aa-0.22□□□□□ -2.45
CMS1YLR003C YRF1-1P0CX20 1796 aa-0.22□□□□□ -2.45
CMS1YLR003C YRF1-5P0CX21 1796 aa-0.22□□□□□ -2.45
CMS1YLR003C YRF1-8P0CX22 1796 aa-0.22□□□□□ -2.45
CMS1YLR003C YBR292CP38357 123 aa-0.23□□□□□ -2.45
CMS1YLR003C ATX1P38636 73 aa-0.23□□□□□ -2.45
CMS1YLR003C TY3B-IQ7LHG5 1498 aaKnown RBP-0.23□□□□□ -2.45
CMS1YLR003C YBR016WP38216 128 aa-0.24□□□□□ -2.45
CMS1YLR003C YNL198CP40166 100 aa-0.24□□□□□ -2.45
CMS1YLR003C YOS1Q3E834 85 aa-0.24□□□□□ -2.45
CMS1YLR003C SRB6P32570 121 aa-0.25□□□□□ -2.45
CMS1YLR003C TY1B-BRQ12193 1756 aa-0.26□□□□□ -2.45
CMS1YLR003C KRE5P22023 1365 aa-0.26□□□□□ -2.45
CMS1YLR003C RUB1Q03919 77 aa-0.26□□□□□ -2.45
CMS1YLR003C ICY1Q04329 127 aa-0.26□□□□□ -2.45
CMS1YLR003C CAT8P39113 1433 aa-0.28□□□□□ -2.45
CMS1YLR003C MRP17P28778 131 aa-0.28□□□□□ -2.45
CMS1YLR003C GNA1P43577 159 aaPredicted RBP-0.28□□□□□ -2.45
CMS1YLR003C MIC10Q96VH5 97 aa-0.28□□□□□ -2.45
CMS1YLR003C UBC4P15731 148 aa-0.29□□□□□ -2.46
CMS1YLR003C YCR095W-AQ3E787 52 aa-0.29□□□□□ -2.46
CMS1YLR003C DNF3Q12674 1656 aa-0.3□□□□□ -2.46
CMS1YLR003C TY1B-LR3P0C2I6 1755 aaKnown RBP-0.31□□□□□ -2.46
CMS1YLR003C TY1B-PR3P0C2J1 1755 aaKnown RBP-0.31□□□□□ -2.46
CMS1YLR003C YFR009W-AP0C5M9 85 aa-0.31□□□□□ -2.46
CMS1YLR003C UBC5P15732 148 aa-0.31□□□□□ -2.46
CMS1YLR003C RSM18P40033 138 aa-0.31□□□□□ -2.46
CMS1YLR003C RPC10P40422 70 aa-0.32□□□□□ -2.46
CMS1YLR003C SNA2P56508 79 aa-0.32□□□□□ -2.46
CMS1YLR003C MIX14Q04341 121 aa-0.32□□□□□ -2.46
CMS1YLR003C YNR034W-AQ3E841 98 aa-0.32□□□□□ -2.46
CMS1YLR003C ROX3P25046 220 aa-0.33□□□□□ -2.46
CMS1YLR003C AIM19P40502 157 aa-0.33□□□□□ -2.46
CMS1YLR003C YMR103CQ04436 120 aa-0.33□□□□□ -2.46
CMS1YLR003C TSC11P40061 1430 aa-0.33□□□□□ -2.46
CMS1YLR003C GEA1P47102 1408 aaPredicted RBP-0.33□□□□□ -2.46
CMS1YLR003C YOR304C-AO14468 76 aa-0.34□□□□□ -2.46
CMS1YLR003C PAU5P43575 122 aa-0.34□□□□□ -2.46
CMS1YLR003C YMR090WQ04304 227 aaKnown RBP-0.34□□□□□ -2.46
CMS1YLR003C MDS3P53094 1487 aa-0.35□□□□□ -2.46
CMS1YLR003C PAU6P0CE90 120 aa-0.35□□□□□ -2.47
CMS1YLR003C PAU18P0CE91 120 aa-0.35□□□□□ -2.47
CMS1YLR003C PAU20Q08322 120 aa-0.35□□□□□ -2.47
CMS1YLR003C TY1B-PR2P0C2J0 1756 aa-0.36□□□□□ -2.47
CMS1YLR003C YBL071CP38185 102 aa-0.36□□□□□ -2.47
CMS1YLR003C YHL005CP38752 130 aa-0.36□□□□□ -2.47
CMS1YLR003C BUD4P47136 1447 aa-0.37□□□□□ -2.47
CMS1YLR003C PDR11P40550 1411 aa-0.38□□□□□ -2.47
CMS1YLR003C RPL38P49167 78 aaKnown RBP-0.38□□□□□ -2.47
CMS1YLR003C YBR090CP38253 122 aa-0.39□□□□□ -2.47
CMS1YLR003C TY1B-DR6P0C2I3 1755 aa-0.4□□□□□ -2.47
CMS1YLR003C TY1B-LR2P0C2I5 1755 aa-0.4□□□□□ -2.47
CMS1YLR003C TY1B-JR2P47100 1755 aaKnown RBP-0.4□□□□□ -2.47
CMS1YLR003C TY1B-MR1Q04214 1755 aa-0.4□□□□□ -2.47
CMS1YLR003C TY1B-MR2Q04670 1755 aaKnown RBP-0.4□□□□□ -2.47
CMS1YLR003C TY1B-NL1Q12112 1755 aa-0.4□□□□□ -2.47
CMS1YLR003C TY1B-GR1Q12141 1755 aa-0.4□□□□□ -2.47
CMS1YLR003C TY1B-GR3Q12316 1755 aa-0.4□□□□□ -2.47
CMS1YLR003C TY1B-PLQ12414 1755 aaKnown RBP-0.4□□□□□ -2.47
CMS1YLR003C TY1B-ORQ92393 1755 aa-0.4□□□□□ -2.47
CMS1YLR003C RSF2P46974 1380 aa-0.41□□□□□ -2.47
CMS1YLR003C COX7P10174 60 aa-0.41□□□□□ -2.48
CMS1YLR003C LHP1P33399 275 aaKnown RBP-0.41□□□□□ -2.48
CMS1YLR003C PDX3P38075 228 aaKnown RBP-0.41□□□□□ -2.48
CMS1YLR003C RPS12P48589 143 aaKnown RBP-0.41□□□□□ -2.48
CMS1YLR003C RSM19P53733 91 aaPredicted RBP-0.41□□□□□ -2.48
CMS1YLR003C SGF11Q03067 99 aa-0.41□□□□□ -2.48
CMS1YLR003C REV3P14284 1504 aa-0.42□□□□□ -2.48
CMS1YLR003C HKR1P41809 1802 aa-0.42□□□□□ -2.48
CMS1YLR003C PAU1P0CE88 120 aa-0.42□□□□□ -2.48
CMS1YLR003C PAU14P0CE89 120 aa-0.42□□□□□ -2.48
CMS1YLR003C PAU8P0CE92 120 aa-0.42□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms