RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C TY2B-CP25384 1770 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-JR1P47098 1755 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-ML2Q03434 1755 aaKnown RBP0.84□□□□□ -2.27
UBP11YKR098C TY2B-DR2Q03494 1770 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-ER1Q03612 1755 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-ML1Q04711 1755 aaKnown RBP0.84□□□□□ -2.27
UBP11YKR098C TY2B-DR3Q07791 1770 aaKnown RBP0.84□□□□□ -2.27
UBP11YKR098C TY2B-OR1Q12113 1770 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-BRQ12193 1756 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-GR2Q12269 1755 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-OLQ12273 1755 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-PLQ12414 1755 aaKnown RBP0.84□□□□□ -2.27
UBP11YKR098C TY2B-DR1Q12472 1770 aa0.84□□□□□ -2.27
UBP11YKR098C TY2B-BQ12491 1770 aa0.84□□□□□ -2.27
UBP11YKR098C TY2B-OR2Q12501 1770 aa0.84□□□□□ -2.27
UBP11YKR098C GEA2P39993 1459 aaKnown RBP0.84□□□□□ -2.27
UBP11YKR098C PAU19P0CE85 124 aa0.84□□□□□ -2.28
UBP11YKR098C PAU3P25610 124 aa0.84□□□□□ -2.28
UBP11YKR098C YLR363W-AQ3E747 85 aa0.84□□□□□ -2.28
UBP11YKR098C YGL041C-BQ3E750 60 aa0.84□□□□□ -2.28
UBP11YKR098C YGR240C-AQ3E786 66 aa0.84□□□□□ -2.28
UBP11YKR098C LTE1P07866 1435 aa0.83□□□□□ -2.28
UBP11YKR098C DNA2P38859 1522 aa0.83□□□□□ -2.28
UBP11YKR098C LSM2P38203 95 aaKnown RBP0.83□□□□□ -2.28
UBP11YKR098C YEA6P39953 335 aa0.83□□□□□ -2.28
UBP11YKR098C GNA1P43577 159 aaPredicted RBP0.83□□□□□ -2.28
UBP11YKR098C ICS3P47034 131 aa0.83□□□□□ -2.28
UBP11YKR098C RSF2P46974 1380 aa0.83□□□□□ -2.28
UBP11YKR098C SCC2Q04002 1493 aa0.83□□□□□ -2.28
UBP11YKR098C YRF1-6P53819 1859 aa0.83□□□□□ -2.28
UBP11YKR098C SEC16P48415 2195 aaKnown RBP0.83□□□□□ -2.28
UBP11YKR098C YMR321CQ04898 105 aa0.83□□□□□ -2.28
UBP11YKR098C ESC1Q03661 1658 aaKnown RBP0.83□□□□□ -2.28
UBP11YKR098C TY1B-JR2P47100 1755 aaKnown RBP0.83□□□□□ -2.28
UBP11YKR098C TY1B-ER2Q03619 1755 aa0.83□□□□□ -2.28
UBP11YKR098C TY1B-MR1Q04214 1755 aa0.83□□□□□ -2.28
UBP11YKR098C TY1B-MR2Q04670 1755 aaKnown RBP0.83□□□□□ -2.28
UBP11YKR098C TY1B-LR1Q12088 1755 aaKnown RBP0.83□□□□□ -2.28
UBP11YKR098C TY1B-NL1Q12112 1755 aa0.83□□□□□ -2.28
UBP11YKR098C TY1B-GR1Q12141 1755 aa0.83□□□□□ -2.28
UBP11YKR098C TY1B-GR3Q12316 1755 aa0.83□□□□□ -2.28
UBP11YKR098C TY1B-BLQ12490 1755 aa0.83□□□□□ -2.28
UBP11YKR098C TY1B-ORQ92393 1755 aa0.83□□□□□ -2.28
UBP11YKR098C IQG1Q12280 1495 aa0.82□□□□□ -2.28
UBP11YKR098C LYS2P07702 1392 aa0.82□□□□□ -2.28
UBP11YKR098C SRB6P32570 121 aa0.82□□□□□ -2.28
UBP11YKR098C YBR090CP38253 122 aa0.82□□□□□ -2.28
UBP11YKR098C SIN3P22579 1536 aa0.82□□□□□ -2.28
UBP11YKR098C FAS2P19097 1887 aaKnown RBP0.82□□□□□ -2.28
UBP11YKR098C YFR010W-AP0C5N0 62 aa0.81□□□□□ -2.28
UBP11YKR098C SSS1P35179 80 aa0.81□□□□□ -2.28
UBP11YKR098C LCL1Q02786 101 aa0.81□□□□□ -2.28
UBP11YKR098C YOR034C-AQ3E735 80 aa0.81□□□□□ -2.28
UBP11YKR098C YHR213W-AQ8TGT4 77 aa0.81□□□□□ -2.28
UBP11YKR098C TY1B-NL2Q99337 1749 aaKnown RBP0.81□□□□□ -2.28
UBP11YKR098C SRB8P25648 1427 aa0.81□□□□□ -2.28
UBP11YKR098C MON2P48563 1636 aaPredicted RBP0.81□□□□□ -2.28
UBP11YKR098C UBC5P15732 148 aa0.81□□□□□ -2.28
UBP11YKR098C HUR1P45820 110 aa0.81□□□□□ -2.28
UBP11YKR098C YGR164WP53291 111 aa0.81□□□□□ -2.28
UBP11YKR098C SWC7Q06707 132 aa0.81□□□□□ -2.28
UBP11YKR098C YDR029WQ12111 104 aa0.81□□□□□ -2.28
UBP11YKR098C YOS1Q3E834 85 aa0.81□□□□□ -2.28
UBP11YKR098C PDR11P40550 1411 aa0.81□□□□□ -2.28
UBP11YKR098C BNI1P41832 1953 aa0.81□□□□□ -2.28
UBP11YKR098C YPK9Q12697 1472 aa0.81□□□□□ -2.28
UBP11YKR098C NUP170P38181 1502 aa0.8□□□□□ -2.28
UBP11YKR098C RPL43AP0CX25 92 aaKnown RBP0.8□□□□□ -2.28
UBP11YKR098C RPL43BP0CX26 92 aa0.8□□□□□ -2.28
UBP11YKR098C HMRA1P0CY11 126 aa0.8□□□□□ -2.28
UBP11YKR098C VPS55P47111 140 aa0.8□□□□□ -2.28
UBP11YKR098C MRPS12P53732 153 aa0.8□□□□□ -2.28
UBP11YKR098C YMR103CQ04436 120 aa0.8□□□□□ -2.28
UBP11YKR098C MMS22Q06164 1454 aa0.8□□□□□ -2.28
UBP11YKR098C YCF1P39109 1515 aaKnown RBP0.8□□□□□ -2.28
UBP11YKR098C CAT8P39113 1433 aa0.8□□□□□ -2.28
UBP11YKR098C VMA21P41806 77 aa0.8□□□□□ -2.28
UBP11YKR098C CWP2P43497 92 aa0.8□□□□□ -2.28
UBP11YKR098C GEA1P47102 1408 aaPredicted RBP0.8□□□□□ -2.28
UBP11YKR098C YJR128WP47162 119 aa0.8□□□□□ -2.28
UBP11YKR098C URB1P34241 1764 aaKnown RBP0.8□□□□□ -2.28
UBP11YKR098C VPS15P22219 1454 aa0.8□□□□□ -2.28
UBP11YKR098C YRF1-2P40105 1681 aa0.79□□□□□ -2.28
UBP11YKR098C SSK2P53599 1579 aa0.79□□□□□ -2.28
UBP11YKR098C ECM12O13529 151 aa0.79□□□□□ -2.28
UBP11YKR098C PAI3P01094 68 aa0.79□□□□□ -2.28
UBP11YKR098C YIL134C-AQ45U18 67 aa0.79□□□□□ -2.28
UBP11YKR098C MIC10Q96VH5 97 aa0.79□□□□□ -2.28
UBP11YKR098C BRR2P32639 2163 aaKnown RBP0.79□□□□□ -2.28
UBP11YKR098C PDR10P51533 1564 aa0.79□□□□□ -2.28
UBP11YKR098C PAU16P35994 123 aa0.79□□□□□ -2.28
UBP11YKR098C EMC5P40540 141 aa0.79□□□□□ -2.28
UBP11YKR098C MSL1P40567 111 aaPredicted RBP0.79□□□□□ -2.28
UBP11YKR098C PAU15P40585 124 aa0.79□□□□□ -2.28
UBP11YKR098C YMR090WQ04304 227 aaKnown RBP0.79□□□□□ -2.28
UBP11YKR098C LSM6Q06406 86 aaKnown RBP0.79□□□□□ -2.28
UBP11YKR098C YOL131WQ08270 108 aa0.79□□□□□ -2.28
UBP11YKR098C NUP159P40477 1460 aa0.79□□□□□ -2.28
UBP11YKR098C MLP1Q02455 1875 aaKnown RBP0.79□□□□□ -2.28
UBP11YKR098C USO1P25386 1790 aa0.78□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms