RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C YPR117WQ06116 2489 aa0.26□□□□□ -2.37
NUP120YKL057C TY1B-NL2Q99337 1749 aaKnown RBP0.26□□□□□ -2.37
NUP120YKL057C RPO41P13433 1351 aaKnown RBP0.26□□□□□ -2.37
NUP120YKL057C SNQ2P32568 1501 aaKnown RBP0.26□□□□□ -2.37
NUP120YKL057C ATG2P53855 1592 aa0.25□□□□□ -2.37
NUP120YKL057C SEC59P20048 519 aa0.25□□□□□ -2.37
NUP120YKL057C VMA7P39111 118 aa0.25□□□□□ -2.37
NUP120YKL057C GDB1Q06625 1536 aa0.25□□□□□ -2.37
NUP120YKL057C RPL14AP36105 138 aaKnown RBP0.25□□□□□ -2.37
NUP120YKL057C RPL14BP38754 138 aaKnown RBP0.25□□□□□ -2.37
NUP120YKL057C YIL163CP40448 117 aa0.25□□□□□ -2.37
NUP120YKL057C RPL22BP56628 122 aaKnown RBP0.25□□□□□ -2.37
NUP120YKL057C DYN2Q02647 92 aa0.25□□□□□ -2.37
NUP120YKL057C ESP1Q03018 1630 aa0.25□□□□□ -2.37
NUP120YKL057C VTH1P40438 1549 aa0.25□□□□□ -2.37
NUP120YKL057C VTH2P40890 1549 aa0.25□□□□□ -2.37
NUP120YKL057C GCN2P15442 1659 aa0.25□□□□□ -2.37
NUP120YKL057C RKR1Q04781 1562 aa0.24□□□□□ -2.37
NUP120YKL057C YSP2Q06681 1438 aa0.24□□□□□ -2.37
NUP120YKL057C HUR1P45820 110 aa0.24□□□□□ -2.37
NUP120YKL057C NUP192P47054 1683 aa0.24□□□□□ -2.37
NUP120YKL057C RPL22AP05749 121 aaKnown RBP0.24□□□□□ -2.37
NUP120YKL057C VPS15P22219 1454 aa0.23□□□□□ -2.37
NUP120YKL057C SEC16P48415 2195 aaKnown RBP0.23□□□□□ -2.37
NUP120YKL057C PDX3P38075 228 aaKnown RBP0.22□□□□□ -2.37
NUP120YKL057C YAL064WP39711 94 aa0.22□□□□□ -2.37
NUP120YKL057C RAD50P12753 1312 aa0.22□□□□□ -2.37
NUP120YKL057C YCL001W-AP87012 153 aa0.22□□□□□ -2.37
NUP120YKL057C FAS1P07149 2051 aaKnown RBP0.22□□□□□ -2.37
NUP120YKL057C MOT1P32333 1867 aa0.22□□□□□ -2.37
NUP120YKL057C YHL005CP38752 130 aa0.22□□□□□ -2.37
NUP120YKL057C MIC27P50945 234 aa0.22□□□□□ -2.37
NUP120YKL057C TRS20P38334 175 aa0.21□□□□□ -2.38
NUP120YKL057C YEA6P39953 335 aa0.21□□□□□ -2.38
NUP120YKL057C NKP2Q06162 153 aa0.21□□□□□ -2.38
NUP120YKL057C RSF2P46974 1380 aa0.21□□□□□ -2.38
NUP120YKL057C PDR5P33302 1511 aaKnown RBP0.2□□□□□ -2.38
NUP120YKL057C APS2Q00381 147 aa0.2□□□□□ -2.38
NUP120YKL057C COX12Q01519 83 aa0.2□□□□□ -2.38
NUP120YKL057C YDR210WQ03482 75 aa0.2□□□□□ -2.38
NUP120YKL057C SPO14P36126 1683 aa0.2□□□□□ -2.38
NUP120YKL057C ATG8P38182 117 aaRIP-Chip data0.2□□□□□ -2.38not detected
NUP120YKL057C YIL086CP40503 102 aa0.2□□□□□ -2.38
NUP120YKL057C MVB12P42939 101 aa0.2□□□□□ -2.38
NUP120YKL057C FRQ1Q06389 190 aa0.2□□□□□ -2.38
NUP120YKL057C YPL261CQ08976 102 aa0.19□□□□□ -2.38
NUP120YKL057C SRX1P36077 127 aa0.18□□□□□ -2.38
NUP120YKL057C AIM4P38305 123 aaPredicted RBP0.18□□□□□ -2.38
NUP120YKL057C TOR1P35169 2470 aa0.18□□□□□ -2.38
NUP120YKL057C UTP11P34247 250 aaPredicted RBP0.18□□□□□ -2.38
NUP120YKL057C YLR363W-AQ3E747 85 aa0.18□□□□□ -2.38
NUP120YKL057C FAS2P19097 1887 aaKnown RBP0.18□□□□□ -2.38
NUP120YKL057C VMA21P41806 77 aa0.18□□□□□ -2.38
NUP120YKL057C HPA2Q06592 156 aa0.18□□□□□ -2.38
NUP120YKL057C UFD4P33202 1483 aa0.17□□□□□ -2.38
NUP120YKL057C YGL149WP53116 101 aa0.17□□□□□ -2.38
NUP120YKL057C TY3B-GQ99315 1547 aa0.17□□□□□ -2.38
NUP120YKL057C YOS1Q3E834 85 aa0.16□□□□□ -2.38
NUP120YKL057C USO1P25386 1790 aa0.16□□□□□ -2.38
NUP120YKL057C YHR138CP38841 114 aaPredicted RBP0.16□□□□□ -2.38
NUP120YKL057C SAE3P89114 91 aa0.16□□□□□ -2.38
NUP120YKL057C MIX14Q04341 121 aa0.16□□□□□ -2.38
NUP120YKL057C PDR11P40550 1411 aa0.15□□□□□ -2.38
NUP120YKL057C YKL044WP36092 106 aa0.15□□□□□ -2.39
NUP120YKL057C TIM8P57744 87 aa0.15□□□□□ -2.39
NUP120YKL057C MRP49P32388 137 aa0.15□□□□□ -2.39
NUP120YKL057C VMR1P38735 1592 aa0.15□□□□□ -2.39
NUP120YKL057C YBR292CP38357 123 aa0.14□□□□□ -2.39
NUP120YKL057C FCF2Q12035 217 aaPredicted RBP0.14□□□□□ -2.39
NUP120YKL057C TCB3Q03640 1545 aaKnown RBP0.14□□□□□ -2.39
NUP120YKL057C RPO21P04050 1733 aaKnown RBP0.14□□□□□ -2.39
NUP120YKL057C SNF11P38956 169 aa0.14□□□□□ -2.39
NUP120YKL057C DAD1Q12248 94 aa0.14□□□□□ -2.39
NUP120YKL057C FIG2P25653 1609 aa0.14□□□□□ -2.39
NUP120YKL057C TVP18Q04767 167 aa0.13□□□□□ -2.39
NUP120YKL057C MYO4P32492 1471 aa0.13□□□□□ -2.39
NUP120YKL057C SCC2Q04002 1493 aa0.13□□□□□ -2.39
NUP120YKL057C NUP188P52593 1655 aaKnown RBP0.13□□□□□ -2.39
NUP120YKL057C NUP159P40477 1460 aa0.12□□□□□ -2.39
NUP120YKL057C ACP1P32463 125 aa0.12□□□□□ -2.39
NUP120YKL057C PRP8P33334 2413 aaKnown RBP0.12□□□□□ -2.39
NUP120YKL057C YLR255CO13574 117 aa0.12□□□□□ -2.39
NUP120YKL057C GNA1P43577 159 aaPredicted RBP0.12□□□□□ -2.39
NUP120YKL057C BEM2P39960 2167 aaKnown RBP0.12□□□□□ -2.39
NUP120YKL057C YLR365WQ7LIF2 110 aa0.11□□□□□ -2.39
NUP120YKL057C TY2B-BQ12491 1770 aa0.11□□□□□ -2.39
NUP120YKL057C GCN1P33892 2672 aaKnown RBP0.11□□□□□ -2.39
NUP120YKL057C MPC2P38857 129 aa0.11□□□□□ -2.39
NUP120YKL057C RPB11P38902 120 aa0.11□□□□□ -2.39
NUP120YKL057C MRPS12P53732 153 aa0.1□□□□□ -2.39
NUP120YKL057C LCL1Q02786 101 aa0.1□□□□□ -2.39
NUP120YKL057C UBC5P15732 148 aa0.1□□□□□ -2.39
NUP120YKL057C YBR090CP38253 122 aa0.1□□□□□ -2.39
NUP120YKL057C YOL118CQ08259 102 aa0.1□□□□□ -2.39
NUP120YKL057C RRP5Q05022 1729 aaKnown RBP0.1□□□□□ -2.39
NUP120YKL057C NUP170P38181 1502 aa0.1□□□□□ -2.39
NUP120YKL057C LYS2P07702 1392 aa0.09□□□□□ -2.39
NUP120YKL057C YBT1P32386 1661 aa0.09□□□□□ -2.39
NUP120YKL057C UBC4P15731 148 aa0.09□□□□□ -2.4
NUP120YKL057C RTR2Q12378 196 aa0.09□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms