RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C PDR11P40550 1411 aa0.8□□□□□ -2.28
HIR3YJR140C NUP159P40477 1460 aa0.8□□□□□ -2.28
HIR3YJR140C PDX3P38075 228 aaKnown RBP0.8□□□□□ -2.28
HIR3YJR140C MIX14Q04341 121 aa0.8□□□□□ -2.28
HIR3YJR140C ULS1Q08562 1619 aa0.8□□□□□ -2.28
HIR3YJR140C KRE5P22023 1365 aa0.8□□□□□ -2.28
HIR3YJR140C YLR419WQ06698 1435 aaKnown RBP0.8□□□□□ -2.28
HIR3YJR140C PAU16P35994 123 aa0.8□□□□□ -2.28
HIR3YJR140C PAU15P40585 124 aa0.8□□□□□ -2.28
HIR3YJR140C IMP2P46972 177 aa0.8□□□□□ -2.28
HIR3YJR140C RPL43AP0CX25 92 aaKnown RBP0.8□□□□□ -2.28
HIR3YJR140C RPL43BP0CX26 92 aa0.8□□□□□ -2.28
HIR3YJR140C LYS2P07702 1392 aa0.8□□□□□ -2.28
HIR3YJR140C YCR101CP25607 182 aa0.79□□□□□ -2.28
HIR3YJR140C YPL038W-AQ3E7B4 63 aa0.79□□□□□ -2.28
HIR3YJR140C NTE1Q04958 1679 aa0.79□□□□□ -2.28
HIR3YJR140C TY4B-JP47024 1803 aa0.79□□□□□ -2.28
HIR3YJR140C UBC4P15731 148 aa0.79□□□□□ -2.28
HIR3YJR140C UBC5P15732 148 aa0.79□□□□□ -2.28
HIR3YJR140C BUD23P25627 275 aaPredicted RBP0.79□□□□□ -2.28
HIR3YJR140C YHL005CP38752 130 aa0.79□□□□□ -2.28
HIR3YJR140C GCV3P39726 170 aaPredicted RBP0.79□□□□□ -2.28
HIR3YJR140C SUS1Q6WNK7 96 aa0.79□□□□□ -2.28
HIR3YJR140C HAP1P0CE41 1502 aa0.79□□□□□ -2.28
HIR3YJR140C RSM19P53733 91 aaPredicted RBP0.79□□□□□ -2.28
HIR3YJR140C PAU2P32612 120 aa0.78□□□□□ -2.28
HIR3YJR140C YCR095W-AQ3E787 52 aa0.78□□□□□ -2.28
HIR3YJR140C YBR072C-AQ3E794 53 aa0.78□□□□□ -2.28
HIR3YJR140C YOR093CQ12275 1648 aa0.78□□□□□ -2.28
HIR3YJR140C MHF2Q3E829 80 aa0.78□□□□□ -2.28
HIR3YJR140C TY3B-IQ7LHG5 1498 aaKnown RBP0.78□□□□□ -2.28
HIR3YJR140C COX19Q3E731 98 aa0.78□□□□□ -2.28
HIR3YJR140C SIN3P22579 1536 aa0.78□□□□□ -2.28
HIR3YJR140C TY3B-GQ99315 1547 aa0.78□□□□□ -2.28
HIR3YJR140C SNU13P39990 126 aaKnown RBP0.78□□□□□ -2.29
HIR3YJR140C YRF1-3P0CX14 1859 aa0.78□□□□□ -2.29
HIR3YJR140C YRF1-7P0CX15 1859 aa0.78□□□□□ -2.29
HIR3YJR140C MMS1Q06211 1407 aa0.78□□□□□ -2.29
HIR3YJR140C PAU24P38155 120 aa0.77□□□□□ -2.29
HIR3YJR140C MIC10Q96VH5 97 aa0.77□□□□□ -2.29
HIR3YJR140C AIM19P40502 157 aa0.77□□□□□ -2.29
HIR3YJR140C YIR020CP40575 100 aa0.77□□□□□ -2.29
HIR3YJR140C YOR034C-AQ3E735 80 aa0.77□□□□□ -2.29
HIR3YJR140C CCW14O13547 238 aa0.77□□□□□ -2.29
HIR3YJR140C IML1P47170 1584 aa0.77□□□□□ -2.29
HIR3YJR140C SKI3P17883 1432 aaKnown RBP0.77□□□□□ -2.29
HIR3YJR140C SRB8P25648 1427 aa0.77□□□□□ -2.29
HIR3YJR140C YHR173CP38864 112 aa0.77□□□□□ -2.29
HIR3YJR140C YIL086CP40503 102 aa0.77□□□□□ -2.29
HIR3YJR140C YCF1P39109 1515 aaKnown RBP0.77□□□□□ -2.29
HIR3YJR140C SMC4Q12267 1418 aa0.76□□□□□ -2.29
HIR3YJR140C TCB3Q03640 1545 aaKnown RBP0.76□□□□□ -2.29
HIR3YJR140C YCL001W-BQ96VH2 84 aa0.76□□□□□ -2.29
HIR3YJR140C BEM2P39960 2167 aaKnown RBP0.76□□□□□ -2.29
HIR3YJR140C YRF1-2P40105 1681 aa0.76□□□□□ -2.29
HIR3YJR140C YBR292CP38357 123 aa0.75□□□□□ -2.29
HIR3YJR140C ATX1P38636 73 aa0.75□□□□□ -2.29
HIR3YJR140C YDR010CQ12426 110 aa0.75□□□□□ -2.29
HIR3YJR140C DNF2Q12675 1612 aa0.75□□□□□ -2.29
HIR3YJR140C RSF2P46974 1380 aa0.75□□□□□ -2.29
HIR3YJR140C MPC2P38857 129 aa0.75□□□□□ -2.29
HIR3YJR140C MSL1P40567 111 aaPredicted RBP0.75□□□□□ -2.29
HIR3YJR140C NHP10Q03435 203 aa0.75□□□□□ -2.29
HIR3YJR140C PAU20Q08322 120 aa0.75□□□□□ -2.29
HIR3YJR140C PDR15Q04182 1529 aaKnown RBP0.75□□□□□ -2.29
HIR3YJR140C PAU1P0CE88 120 aa0.75□□□□□ -2.29
HIR3YJR140C PAU14P0CE89 120 aa0.75□□□□□ -2.29
HIR3YJR140C PAU6P0CE90 120 aa0.75□□□□□ -2.29
HIR3YJR140C PAU18P0CE91 120 aa0.75□□□□□ -2.29
HIR3YJR140C PAU8P0CE92 120 aa0.75□□□□□ -2.29
HIR3YJR140C PAU11P0CE93 120 aa0.75□□□□□ -2.29
HIR3YJR140C NHP2P32495 156 aaPredicted RBP0.75□□□□□ -2.29
HIR3YJR140C PAU13P38725 120 aa0.75□□□□□ -2.29
HIR3YJR140C SHU1P38751 150 aa0.75□□□□□ -2.29
HIR3YJR140C MRX7P53869 86 aa0.75□□□□□ -2.29
HIR3YJR140C PAU10Q03050 120 aa0.75□□□□□ -2.29
HIR3YJR140C YDR029WQ12111 104 aa0.75□□□□□ -2.29
HIR3YJR140C PAU9Q3E770 120 aa0.75□□□□□ -2.29
HIR3YJR140C THO2P53552 1597 aaKnown RBP0.74□□□□□ -2.29
HIR3YJR140C MMS22Q06164 1454 aa0.74□□□□□ -2.29
HIR3YJR140C ACC1Q00955 2233 aaKnown RBP0.74□□□□□ -2.29
HIR3YJR140C HMRA1P0CY11 126 aa0.74□□□□□ -2.29
HIR3YJR140C LCL1Q02786 101 aa0.74□□□□□ -2.29
HIR3YJR140C YKL068W-AQ3E826 78 aa0.74□□□□□ -2.29
HIR3YJR140C PAU4P53427 120 aa0.73□□□□□ -2.29
HIR3YJR140C ICY1Q04329 127 aa0.73□□□□□ -2.29
HIR3YJR140C BUD3P25558 1636 aa0.73□□□□□ -2.29
HIR3YJR140C KSH1Q8TGJ3 72 aa0.73□□□□□ -2.29
HIR3YJR140C RKR1Q04781 1562 aa0.73□□□□□ -2.29
HIR3YJR140C YOR289WQ12012 251 aaPredicted RBP0.73□□□□□ -2.29
HIR3YJR140C YRF1-6P53819 1859 aa0.73□□□□□ -2.29
HIR3YJR140C ROX3P25046 220 aa0.72□□□□□ -2.29
HIR3YJR140C RSM18P40033 138 aa0.72□□□□□ -2.29
HIR3YJR140C YLR157W-EP0CF00 54 aa0.72□□□□□ -2.29
HIR3YJR140C YLR307C-AQ3E825 87 aa0.72□□□□□ -2.29
HIR3YJR140C SNQ2P32568 1501 aaKnown RBP0.72□□□□□ -2.29
HIR3YJR140C STU1P38198 1513 aa0.72□□□□□ -2.29
HIR3YJR140C CHC1P22137 1653 aaKnown RBP0.72□□□□□ -2.29
HIR3YJR140C SNF2P22082 1703 aa0.71□□□□□ -2.3
HIR3YJR140C TY1B-NL2Q99337 1749 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms