RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W YMR141CP40211 102 aa1.42□□□□□ -2.18
SNX4YJL036W LSM6Q06406 86 aaKnown RBP1.42□□□□□ -2.18
SNX4YJL036W MRPS12P53732 153 aa1.41□□□□□ -2.18
SNX4YJL036W KSH1Q8TGJ3 72 aa1.41□□□□□ -2.18
SNX4YJL036W URB1P34241 1764 aaKnown RBP1.39□□□□□ -2.19
SNX4YJL036W YOL118CQ08259 102 aa1.39□□□□□ -2.19
SNX4YJL036W LAA1P39526 2014 aa1.39□□□□□ -2.19
SNX4YJL036W YRF1-6P53819 1859 aa1.38□□□□□ -2.19
SNX4YJL036W CCW14O13547 238 aa1.38□□□□□ -2.19
SNX4YJL036W SRB6P32570 121 aa1.38□□□□□ -2.19
SNX4YJL036W RPL37BP51402 88 aaKnown RBP1.38□□□□□ -2.19
SNX4YJL036W LCL1Q02786 101 aa1.38□□□□□ -2.19
SNX4YJL036W IMP2P46972 177 aa1.36□□□□□ -2.19
SNX4YJL036W YJR128WP47162 119 aa1.36□□□□□ -2.19
SNX4YJL036W RSM19P53733 91 aaPredicted RBP1.36□□□□□ -2.19
SNX4YJL036W YHL005CP38752 130 aa1.35□□□□□ -2.19
SNX4YJL036W YOR034C-AQ3E735 80 aa1.35□□□□□ -2.19
SNX4YJL036W SEC16P48415 2195 aaKnown RBP1.35□□□□□ -2.19
SNX4YJL036W SEC7P11075 2009 aaKnown RBP1.35□□□□□ -2.19
SNX4YJL036W YDR210WQ03482 75 aa1.34□□□□□ -2.19
SNX4YJL036W RSF2P46974 1380 aa1.34□□□□□ -2.2
SNX4YJL036W RPA190P10964 1664 aaKnown RBP1.33□□□□□ -2.2
SNX4YJL036W RPL43AP0CX25 92 aaKnown RBP1.33□□□□□ -2.2
SNX4YJL036W RPL43BP0CX26 92 aa1.33□□□□□ -2.2
SNX4YJL036W ROX3P25046 220 aa1.32□□□□□ -2.2
SNX4YJL036W PAU5P43575 122 aa1.32□□□□□ -2.2
SNX4YJL036W BNI1P41832 1953 aa1.32□□□□□ -2.2
SNX4YJL036W NTE1Q04958 1679 aa1.32□□□□□ -2.2
SNX4YJL036W URA2P07259 2214 aaKnown RBP1.31□□□□□ -2.2
SNX4YJL036W PDR10P51533 1564 aa1.31□□□□□ -2.2
SNX4YJL036W EMC5P40540 141 aa1.31□□□□□ -2.2
SNX4YJL036W YCR095W-AQ3E787 52 aa1.31□□□□□ -2.2
SNX4YJL036W YLR255CO13574 117 aa1.3□□□□□ -2.2
SNX4YJL036W MSL1P40567 111 aaPredicted RBP1.3□□□□□ -2.2
SNX4YJL036W COX12Q01519 83 aa1.3□□□□□ -2.2
SNX4YJL036W YPL038W-AQ3E7B4 63 aa1.3□□□□□ -2.2
SNX4YJL036W HMRA1P0CY11 126 aa1.29□□□□□ -2.2
SNX4YJL036W YIL086CP40503 102 aa1.29□□□□□ -2.2
SNX4YJL036W YCL001W-BQ96VH2 84 aa1.29□□□□□ -2.2
SNX4YJL036W SRB8P25648 1427 aa1.29□□□□□ -2.2
SNX4YJL036W YER188C-AP0C0V2 99 aa1.28□□□□□ -2.2
SNX4YJL036W SNA2P56508 79 aa1.28□□□□□ -2.2
SNX4YJL036W COX19Q3E731 98 aa1.28□□□□□ -2.2
SNX4YJL036W RRT15Q3E811 62 aa1.28□□□□□ -2.2
SNX4YJL036W MYO1P08964 1928 aa1.28□□□□□ -2.2
SNX4YJL036W BRR2P32639 2163 aaKnown RBP1.28□□□□□ -2.2
SNX4YJL036W SKI3P17883 1432 aaKnown RBP1.27□□□□□ -2.21
SNX4YJL036W YCR075W-AQ3E830 75 aa1.27□□□□□ -2.21
SNX4YJL036W SHU1P38751 150 aa1.26□□□□□ -2.21
SNX4YJL036W GCV3P39726 170 aaPredicted RBP1.26□□□□□ -2.21
SNX4YJL036W YDR029WQ12111 104 aa1.26□□□□□ -2.21
SNX4YJL036W TY4B-HP0C2J7 1802 aa1.25□□□□□ -2.21
SNX4YJL036W MRP17P28778 131 aa1.25□□□□□ -2.21
SNX4YJL036W MRX7P53869 86 aa1.25□□□□□ -2.21
SNX4YJL036W YLR307C-AQ3E825 87 aa1.25□□□□□ -2.21
SNX4YJL036W SSN2P38931 1420 aa1.24□□□□□ -2.21
SNX4YJL036W PAU6P0CE90 120 aa1.23□□□□□ -2.21
SNX4YJL036W PAU18P0CE91 120 aa1.23□□□□□ -2.21
SNX4YJL036W YLR157W-EP0CF00 54 aa1.23□□□□□ -2.21
SNX4YJL036W YBL071CP38185 102 aa1.23□□□□□ -2.21
SNX4YJL036W MPC2P38857 129 aa1.23□□□□□ -2.21
SNX4YJL036W RSM18P40033 138 aa1.23□□□□□ -2.21
SNX4YJL036W YDR042CQ03205 200 aa1.23□□□□□ -2.21
SNX4YJL036W SUS1Q6WNK7 96 aa1.23□□□□□ -2.21
SNX4YJL036W POL2P21951 2222 aaKnown RBP1.23□□□□□ -2.21
SNX4YJL036W YRF1-1P0CX20 1796 aa1.22□□□□□ -2.21
SNX4YJL036W YRF1-5P0CX21 1796 aa1.22□□□□□ -2.21
SNX4YJL036W YRF1-8P0CX22 1796 aa1.22□□□□□ -2.21
SNX4YJL036W SWR1Q05471 1514 aa1.22□□□□□ -2.21
SNX4YJL036W MRPL38P35996 138 aaPredicted RBP1.22□□□□□ -2.21
SNX4YJL036W AUA1P32450 94 aa1.21□□□□□ -2.22
SNX4YJL036W AIM19P40502 157 aa1.21□□□□□ -2.22
SNX4YJL036W YMR082CQ04276 118 aa1.21□□□□□ -2.22
SNX4YJL036W ICY1Q04329 127 aa1.21□□□□□ -2.22
SNX4YJL036W YBR072C-AQ3E794 53 aa1.21□□□□□ -2.22
SNX4YJL036W YNR034W-AQ3E841 98 aa1.21□□□□□ -2.22
SNX4YJL036W YBR292CP38357 123 aa1.2□□□□□ -2.22
SNX4YJL036W NHP10Q03435 203 aa1.2□□□□□ -2.22
SNX4YJL036W GDB1Q06625 1536 aa1.2□□□□□ -2.22
SNX4YJL036W SNU13P39990 126 aaKnown RBP1.19□□□□□ -2.22
SNX4YJL036W SPC1P46965 94 aa1.19□□□□□ -2.22
SNX4YJL036W ESC1Q03661 1658 aaKnown RBP1.19□□□□□ -2.22
SNX4YJL036W ECM12O13529 151 aa1.18□□□□□ -2.22
SNX4YJL036W YHR173CP38864 112 aa1.18□□□□□ -2.22
SNX4YJL036W PAU20Q08322 120 aa1.18□□□□□ -2.22
SNX4YJL036W YDR010CQ12426 110 aa1.18□□□□□ -2.22
SNX4YJL036W LTE1P07866 1435 aa1.17□□□□□ -2.22
SNX4YJL036W PAU1P0CE88 120 aa1.17□□□□□ -2.22
SNX4YJL036W PAU14P0CE89 120 aa1.17□□□□□ -2.22
SNX4YJL036W PAU8P0CE92 120 aa1.17□□□□□ -2.22
SNX4YJL036W PAU11P0CE93 120 aa1.17□□□□□ -2.22
SNX4YJL036W RPS11AP0CX47 156 aaKnown RBP1.17□□□□□ -2.22
SNX4YJL036W RPS11BP0CX48 156 aaKnown RBP1.17□□□□□ -2.22
SNX4YJL036W PAU13P38725 120 aa1.17□□□□□ -2.22
SNX4YJL036W PAU10Q03050 120 aa1.17□□□□□ -2.22
SNX4YJL036W PAU9Q3E770 120 aa1.17□□□□□ -2.22
SNX4YJL036W POL1P13382 1468 aa1.17□□□□□ -2.22
SNX4YJL036W YGL194C-AQ2V2P6 80 aa1.16□□□□□ -2.22
SNX4YJL036W PRP8P33334 2413 aaKnown RBP1.15□□□□□ -2.23
SNX4YJL036W MHF2Q3E829 80 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 121.8 ms