RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W IMP2P46972 177 aa0.58□□□□□ -2.32
SMD1YGR074W RPS12P48589 143 aaKnown RBP0.58□□□□□ -2.32
SMD1YGR074W COX19Q3E731 98 aa0.58□□□□□ -2.32
SMD1YGR074W YBR090CP38253 122 aa0.57□□□□□ -2.32
SMD1YGR074W RGI1P40043 161 aaPredicted RBP0.57□□□□□ -2.32
SMD1YGR074W YIL086CP40503 102 aa0.57□□□□□ -2.32
SMD1YGR074W YMR090WQ04304 227 aaKnown RBP0.57□□□□□ -2.32
SMD1YGR074W RIM15P43565 1770 aa0.57□□□□□ -2.32
SMD1YGR074W LYS2P07702 1392 aa0.57□□□□□ -2.32
SMD1YGR074W GEA1P47102 1408 aaPredicted RBP0.56□□□□□ -2.32
SMD1YGR074W NTE1Q04958 1679 aa0.56□□□□□ -2.32
SMD1YGR074W TY3B-IQ7LHG5 1498 aaKnown RBP0.56□□□□□ -2.32
SMD1YGR074W POL2P21951 2222 aaKnown RBP0.56□□□□□ -2.32
SMD1YGR074W YCR101CP25607 182 aa0.56□□□□□ -2.32
SMD1YGR074W RPS29BP41058 56 aaKnown RBP0.56□□□□□ -2.32
SMD1YGR074W YMR103CQ04436 120 aa0.56□□□□□ -2.32
SMD1YGR074W UBC4P15731 148 aa0.55□□□□□ -2.32
SMD1YGR074W UBC5P15732 148 aa0.55□□□□□ -2.32
SMD1YGR074W BUD23P25627 275 aaPredicted RBP0.55□□□□□ -2.32
SMD1YGR074W PAU16P35994 123 aa0.55□□□□□ -2.32
SMD1YGR074W SHU1P38751 150 aa0.55□□□□□ -2.32
SMD1YGR074W PAU15P40585 124 aa0.55□□□□□ -2.32
SMD1YGR074W COX12Q01519 83 aa0.55□□□□□ -2.32
SMD1YGR074W MIC10Q96VH5 97 aa0.55□□□□□ -2.32
SMD1YGR074W YLR255CO13574 117 aa0.54□□□□□ -2.32
SMD1YGR074W AUA1P32450 94 aa0.54□□□□□ -2.32
SMD1YGR074W LHP1P33399 275 aaKnown RBP0.54□□□□□ -2.32
SMD1YGR074W YHR173CP38864 112 aa0.54□□□□□ -2.32
SMD1YGR074W YER137CP40083 148 aaKnown RBP0.54□□□□□ -2.32
SMD1YGR074W MIX14Q04341 121 aa0.54□□□□□ -2.32
SMD1YGR074W YRF1-1P0CX20 1796 aa0.54□□□□□ -2.32
SMD1YGR074W YRF1-5P0CX21 1796 aa0.54□□□□□ -2.32
SMD1YGR074W YRF1-8P0CX22 1796 aa0.54□□□□□ -2.32
SMD1YGR074W TOP2P06786 1428 aaKnown RBP0.54□□□□□ -2.32
SMD1YGR074W PRP8P33334 2413 aaKnown RBP0.54□□□□□ -2.32
SMD1YGR074W SNF2P22082 1703 aa0.53□□□□□ -2.32
SMD1YGR074W TY1B-BLQ12490 1755 aa0.53□□□□□ -2.32
SMD1YGR074W MPC2P38857 129 aa0.53□□□□□ -2.32
SMD1YGR074W YDR210WQ03482 75 aa0.53□□□□□ -2.32
SMD1YGR074W YPL038W-AQ3E7B4 63 aa0.53□□□□□ -2.32
SMD1YGR074W BUD4P47136 1447 aa0.53□□□□□ -2.32
SMD1YGR074W YRF1-2P40105 1681 aa0.53□□□□□ -2.33
SMD1YGR074W GCV3P39726 170 aaPredicted RBP0.52□□□□□ -2.33
SMD1YGR074W SRB8P25648 1427 aa0.52□□□□□ -2.33
SMD1YGR074W PDR11P40550 1411 aa0.52□□□□□ -2.33
SMD1YGR074W GEA2P39993 1459 aaKnown RBP0.52□□□□□ -2.33
SMD1YGR074W KRE5P22023 1365 aa0.51□□□□□ -2.33
SMD1YGR074W MRP17P28778 131 aa0.51□□□□□ -2.33
SMD1YGR074W REV3P14284 1504 aa0.5□□□□□ -2.33
SMD1YGR074W YBR292CP38357 123 aa0.5□□□□□ -2.33
SMD1YGR074W YHL005CP38752 130 aa0.5□□□□□ -2.33
SMD1YGR074W YCR095W-AQ3E787 52 aa0.5□□□□□ -2.33
SMD1YGR074W TY1B-BRQ12193 1756 aa0.49□□□□□ -2.33
SMD1YGR074W SSN2P38931 1420 aa0.48□□□□□ -2.33
SMD1YGR074W CAT8P39113 1433 aa0.48□□□□□ -2.33
SMD1YGR074W MRX7P53869 86 aa0.48□□□□□ -2.33
SMD1YGR074W SNA2P56508 79 aa0.48□□□□□ -2.33
SMD1YGR074W FYV7Q12247 151 aa0.48□□□□□ -2.33
SMD1YGR074W YOL164W-AQ3E7A5 60 aa0.48□□□□□ -2.33
SMD1YGR074W KSH1Q8TGJ3 72 aa0.48□□□□□ -2.33
SMD1YGR074W AIM19P40502 157 aa0.47□□□□□ -2.33
SMD1YGR074W EMC5P40540 141 aa0.47□□□□□ -2.33
SMD1YGR074W ICY1Q04329 127 aa0.47□□□□□ -2.33
SMD1YGR074W RPA190P10964 1664 aaKnown RBP0.46□□□□□ -2.34
SMD1YGR074W RPS11AP0CX47 156 aaKnown RBP0.46□□□□□ -2.34
SMD1YGR074W RPS11BP0CX48 156 aaKnown RBP0.46□□□□□ -2.34
SMD1YGR074W ROX3P25046 220 aa0.46□□□□□ -2.34
SMD1YGR074W MRPL38P35996 138 aaPredicted RBP0.46□□□□□ -2.34
SMD1YGR074W RSM19P53733 91 aaPredicted RBP0.46□□□□□ -2.34
SMD1YGR074W PAU5P43575 122 aa0.44□□□□□ -2.34
SMD1YGR074W PAU20Q08322 120 aa0.44□□□□□ -2.34
SMD1YGR074W PDX3P38075 228 aaKnown RBP0.43□□□□□ -2.34
SMD1YGR074W YOR289WQ12012 251 aaPredicted RBP0.43□□□□□ -2.34
SMD1YGR074W TY1B-PR2P0C2J0 1756 aa0.42□□□□□ -2.34
SMD1YGR074W MOT1P32333 1867 aa0.42□□□□□ -2.34
SMD1YGR074W PAU6P0CE90 120 aa0.42□□□□□ -2.34
SMD1YGR074W PAU18P0CE91 120 aa0.42□□□□□ -2.34
SMD1YGR074W HMRA1P0CY11 126 aa0.42□□□□□ -2.34
SMD1YGR074W YNR034W-AQ3E841 98 aa0.42□□□□□ -2.34
SMD1YGR074W PAU1P0CE88 120 aa0.41□□□□□ -2.34
SMD1YGR074W PAU14P0CE89 120 aa0.41□□□□□ -2.34
SMD1YGR074W PAU8P0CE92 120 aa0.41□□□□□ -2.34
SMD1YGR074W PAU11P0CE93 120 aa0.41□□□□□ -2.34
SMD1YGR074W YBL071CP38185 102 aa0.41□□□□□ -2.34
SMD1YGR074W PAU13P38725 120 aa0.41□□□□□ -2.34
SMD1YGR074W RSM18P40033 138 aa0.41□□□□□ -2.34
SMD1YGR074W YNL190WP53872 204 aa0.41□□□□□ -2.34
SMD1YGR074W PAU10Q03050 120 aa0.41□□□□□ -2.34
SMD1YGR074W ZEO1Q08245 113 aa0.41□□□□□ -2.34
SMD1YGR074W PAU9Q3E770 120 aa0.41□□□□□ -2.34
SMD1YGR074W RSF2P46974 1380 aa0.41□□□□□ -2.34
SMD1YGR074W TY1B-DR6P0C2I3 1755 aa0.4□□□□□ -2.35
SMD1YGR074W TY1B-LR2P0C2I5 1755 aa0.4□□□□□ -2.35
SMD1YGR074W TY1B-PR3P0C2J1 1755 aaKnown RBP0.4□□□□□ -2.35
SMD1YGR074W TY1B-JR2P47100 1755 aaKnown RBP0.4□□□□□ -2.35
SMD1YGR074W TY1B-MR1Q04214 1755 aa0.4□□□□□ -2.35
SMD1YGR074W TY1B-MR2Q04670 1755 aaKnown RBP0.4□□□□□ -2.35
SMD1YGR074W TY1B-NL1Q12112 1755 aa0.4□□□□□ -2.35
SMD1YGR074W TY1B-GR1Q12141 1755 aa0.4□□□□□ -2.35
SMD1YGR074W TY1B-GR3Q12316 1755 aa0.4□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms