RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W PAU23Q07987 124 aa2.92□□□□□ -1.94
UBP6YFR010W YDL157CQ12082 118 aa2.92□□□□□ -1.94
UBP6YFR010W PAU17Q12370 124 aa2.92□□□□□ -1.94
UBP6YFR010W MLP1Q02455 1875 aaKnown RBP2.92□□□□□ -1.94
UBP6YFR010W LAA1P39526 2014 aa2.92□□□□□ -1.94
UBP6YFR010W UTR5P32630 166 aa2.91□□□□□ -1.94
UBP6YFR010W MET31Q03081 177 aa2.91□□□□□ -1.94
UBP6YFR010W AVO2Q04749 426 aa2.91□□□□□ -1.94
UBP6YFR010W BPT1P14772 1559 aa2.9□□□□□ -1.94
UBP6YFR010W RPL22AP05749 121 aaKnown RBP2.9□□□□□ -1.95
UBP6YFR010W RPB7P34087 171 aa2.9□□□□□ -1.95
UBP6YFR010W YBR209WP38311 105 aa2.9□□□□□ -1.95
UBP6YFR010W YBR292CP38357 123 aa2.9□□□□□ -1.95
UBP6YFR010W PAU5P43575 122 aa2.9□□□□□ -1.95
UBP6YFR010W IMP2P46972 177 aa2.9□□□□□ -1.95
UBP6YFR010W CIS3P47001 227 aa2.9□□□□□ -1.95
UBP6YFR010W PDR12Q02785 1511 aa2.89□□□□□ -1.95
UBP6YFR010W YJL197C-AP0C5P0 93 aa2.89□□□□□ -1.95
UBP6YFR010W SRX1P36077 127 aa2.89□□□□□ -1.95
UBP6YFR010W DAD4P69851 72 aa2.89□□□□□ -1.95
UBP6YFR010W YLR194CQ05777 254 aa2.89□□□□□ -1.95
UBP6YFR010W CMC4Q3E7A9 73 aa2.89□□□□□ -1.95
UBP6YFR010W MHF2Q3E829 80 aa2.89□□□□□ -1.95
UBP6YFR010W YNR034W-AQ3E841 98 aa2.89□□□□□ -1.95
UBP6YFR010W YLR419WQ06698 1435 aaKnown RBP2.89□□□□□ -1.95
UBP6YFR010W RPL36BO14455 100 aaKnown RBP2.88□□□□□ -1.95
UBP6YFR010W COX8P04039 78 aa2.88□□□□□ -1.95
UBP6YFR010W RPL36AP05745 100 aaPredicted RBP2.88□□□□□ -1.95
UBP6YFR010W RPS19AP07280 144 aaKnown RBP2.88□□□□□ -1.95
UBP6YFR010W RPS19BP07281 144 aaPredicted RBP2.88□□□□□ -1.95
UBP6YFR010W SEC11P15367 167 aa2.88□□□□□ -1.95
UBP6YFR010W COX23P38824 151 aa2.88□□□□□ -1.95
UBP6YFR010W YNL198CP40166 100 aa2.88□□□□□ -1.95
UBP6YFR010W MIC27P50945 234 aa2.88□□□□□ -1.95
UBP6YFR010W YGL260WP53056 76 aa2.88□□□□□ -1.95
UBP6YFR010W YDR381C-AQ3E6R5 114 aa2.88□□□□□ -1.95
UBP6YFR010W SNQ2P32568 1501 aaKnown RBP2.88□□□□□ -1.95
UBP6YFR010W YPR145C-AQ2V2P0 78 aa2.88□□□□□ -1.95
UBP6YFR010W YMR030W-AQ3E760 96 aa2.88□□□□□ -1.95
UBP6YFR010W RPL26AP05743 127 aaKnown RBP2.87□□□□□ -1.95
UBP6YFR010W RPS22AP0C0W1 130 aaKnown RBP2.87□□□□□ -1.95
UBP6YFR010W ROX3P25046 220 aa2.87□□□□□ -1.95
UBP6YFR010W YHR022CP38763 256 aa2.87□□□□□ -1.95
UBP6YFR010W KRE9P39005 276 aa2.87□□□□□ -1.95
UBP6YFR010W YEL014CP39999 101 aa2.87□□□□□ -1.95
UBP6YFR010W CYT2Q00873 224 aa2.87□□□□□ -1.95
UBP6YFR010W HPA2Q06592 156 aa2.87□□□□□ -1.95
UBP6YFR010W YOL118CQ08259 102 aa2.87□□□□□ -1.95
UBP6YFR010W VPS68Q12016 184 aa2.87□□□□□ -1.95
UBP6YFR010W VMA9Q3E7B6 73 aa2.87□□□□□ -1.95
UBP6YFR010W RRP5Q05022 1729 aaKnown RBP2.87□□□□□ -1.95
UBP6YFR010W DNF1P32660 1571 aa2.86□□□□□ -1.95
UBP6YFR010W ECM29P38737 1868 aa2.86□□□□□ -1.95
UBP6YFR010W QCR8P08525 94 aa2.86□□□□□ -1.95
UBP6YFR010W NHP2P32495 156 aaPredicted RBP2.86□□□□□ -1.95
UBP6YFR010W FIT2Q08906 153 aa2.86□□□□□ -1.95
UBP6YFR010W YFL041W-AQ3E817 63 aa2.86□□□□□ -1.95
UBP6YFR010W FAS1P07149 2051 aaKnown RBP2.86□□□□□ -1.95
UBP6YFR010W HSP150P32478 413 aa2.85□□□□□ -1.95
UBP6YFR010W GIS2P53849 153 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
UBP6YFR010W YHR214C-DP0CX93 97 aa2.84□□□□□ -1.95
UBP6YFR010W FPR1P20081 114 aaKnown RBP2.84□□□□□ -1.95
UBP6YFR010W YPL038W-AQ3E7B4 63 aa2.84□□□□□ -1.95
UBP6YFR010W PDR5P33302 1511 aaKnown RBP2.84□□□□□ -1.96
UBP6YFR010W RPO21P04050 1733 aaKnown RBP2.84□□□□□ -1.96
UBP6YFR010W HMRA2P0CY13 119 aa2.83□□□□□ -1.96
UBP6YFR010W MRP17P28778 131 aa2.83□□□□□ -1.96
UBP6YFR010W LST8P41318 303 aa2.83□□□□□ -1.96
UBP6YFR010W RPL26BP53221 127 aaKnown RBP2.83□□□□□ -1.96
UBP6YFR010W YMR230W-AQ3E7B5 62 aa2.83□□□□□ -1.96
UBP6YFR010W RPS22BQ3E7Y3 130 aaKnown RBP2.83□□□□□ -1.96
UBP6YFR010W YOR105WQ08504 108 aa2.83□□□□□ -1.96
UBP6YFR010W YOR343CQ12484 108 aa2.83□□□□□ -1.96
UBP6YFR010W SPT6P23615 1451 aaKnown RBP2.83□□□□□ -1.96
UBP6YFR010W UFD4P33202 1483 aa2.83□□□□□ -1.96
UBP6YFR010W IRC20Q06554 1556 aa2.82□□□□□ -1.96
UBP6YFR010W RIF1P29539 1916 aa2.82□□□□□ -1.96
UBP6YFR010W YBR027CP38220 110 aa2.82□□□□□ -1.96
UBP6YFR010W FLO9P39712 1322 aa2.82□□□□□ -1.96
UBP6YFR010W ULS1Q08562 1619 aa2.81□□□□□ -1.96
UBP6YFR010W POR2P40478 281 aa2.81□□□□□ -1.96
UBP6YFR010W YCR095W-AQ3E787 52 aa2.81□□□□□ -1.96
UBP6YFR010W VTH1P40438 1549 aa2.8□□□□□ -1.96
UBP6YFR010W VTH2P40890 1549 aa2.8□□□□□ -1.96
UBP6YFR010W YER084WP40057 128 aa2.8□□□□□ -1.96
UBP6YFR010W LSM6Q06406 86 aaKnown RBP2.8□□□□□ -1.96
UBP6YFR010W YIL102C-AQ2V2P5 75 aa2.8□□□□□ -1.96
UBP6YFR010W PDX3P38075 228 aaKnown RBP2.79□□□□□ -1.96
UBP6YFR010W SPC1P46965 94 aa2.79□□□□□ -1.96
UBP6YFR010W YJL144WP47009 104 aa2.78□□□□□ -1.96
UBP6YFR010W YDR114CQ04597 100 aa2.78□□□□□ -1.96
UBP6YFR010W YMR321CQ04898 105 aa2.78□□□□□ -1.96
UBP6YFR010W YLR285C-AQ3E771 56 aa2.78□□□□□ -1.96
UBP6YFR010W NUP170P38181 1502 aa2.78□□□□□ -1.96
UBP6YFR010W UTP10P42945 1769 aaKnown RBP2.78□□□□□ -1.96
UBP6YFR010W TIM12P32830 109 aa2.78□□□□□ -1.97
UBP6YFR010W YHL037CP38733 133 aa2.78□□□□□ -1.97
UBP6YFR010W SNA2P56508 79 aa2.78□□□□□ -1.97
UBP6YFR010W COX12Q01519 83 aa2.78□□□□□ -1.97
UBP6YFR010W MRPL38P35996 138 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms