RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YGL194C-AQ2V2P6 80 aa1.29□□□□□ -2.2
SEC4YFL005W YGL041C-BQ3E750 60 aa1.29□□□□□ -2.2
SEC4YFL005W YKL068W-AQ3E826 78 aa1.29□□□□□ -2.2
SEC4YFL005W SWR1Q05471 1514 aa1.29□□□□□ -2.2
SEC4YFL005W TY1B-PR2P0C2J0 1756 aa1.29□□□□□ -2.2
SEC4YFL005W HMRA1P0CY11 126 aa1.28□□□□□ -2.2
SEC4YFL005W PAU16P35994 123 aa1.28□□□□□ -2.2
SEC4YFL005W PAU24P38155 120 aa1.28□□□□□ -2.2
SEC4YFL005W PAU15P40585 124 aa1.28□□□□□ -2.2
SEC4YFL005W SCP1Q08873 200 aa1.28□□□□□ -2.2
SEC4YFL005W DNA2P38859 1522 aa1.28□□□□□ -2.2
SEC4YFL005W RSM18P40033 138 aa1.27□□□□□ -2.21
SEC4YFL005W CYB5P40312 120 aa1.27□□□□□ -2.21
SEC4YFL005W YIL163CP40448 117 aa1.27□□□□□ -2.21
SEC4YFL005W YIL102CP40488 101 aa1.27□□□□□ -2.21
SEC4YFL005W SEN15Q04675 128 aa1.27□□□□□ -2.21
SEC4YFL005W LSM6Q06406 86 aaKnown RBP1.27□□□□□ -2.21
SEC4YFL005W YOL118CQ08259 102 aa1.27□□□□□ -2.21
SEC4YFL005W YSF3P0C074 85 aaPredicted RBP1.26□□□□□ -2.21
SEC4YFL005W HMRA2P0CY13 119 aa1.26□□□□□ -2.21
SEC4YFL005W YNL122CP53921 115 aaPredicted RBP1.26□□□□□ -2.21
SEC4YFL005W YDR042CQ03205 200 aa1.26□□□□□ -2.21
SEC4YFL005W PRM3Q08931 133 aa1.26□□□□□ -2.21
SEC4YFL005W TY1B-BRQ12193 1756 aa1.26□□□□□ -2.21
SEC4YFL005W ROX3P25046 220 aa1.25□□□□□ -2.21
SEC4YFL005W VPS55P47111 140 aa1.25□□□□□ -2.21
SEC4YFL005W RPL37BP51402 88 aaKnown RBP1.25□□□□□ -2.21
SEC4YFL005W SNA2P56508 79 aa1.25□□□□□ -2.21
SEC4YFL005W YLR285C-AQ3E771 56 aa1.25□□□□□ -2.21
SEC4YFL005W MHF2Q3E829 80 aa1.25□□□□□ -2.21
SEC4YFL005W ENV10Q99382 181 aa1.25□□□□□ -2.21
SEC4YFL005W NTE1Q04958 1679 aa1.25□□□□□ -2.21
SEC4YFL005W MRP17P28778 131 aa1.24□□□□□ -2.21
SEC4YFL005W RPA12P32529 125 aaKnown RBP1.24□□□□□ -2.21
SEC4YFL005W COX12Q01519 83 aa1.24□□□□□ -2.21
SEC4YFL005W YGR240C-AQ3E786 66 aa1.24□□□□□ -2.21
SEC4YFL005W YCR095W-AQ3E787 52 aa1.24□□□□□ -2.21
SEC4YFL005W GDB1Q06625 1536 aa1.24□□□□□ -2.21
SEC4YFL005W YSP2Q06681 1438 aa1.23□□□□□ -2.21
SEC4YFL005W CCW14O13547 238 aa1.23□□□□□ -2.21
SEC4YFL005W YER188C-AP0C0V2 99 aa1.23□□□□□ -2.21
SEC4YFL005W RPS22AP0C0W1 130 aaKnown RBP1.23□□□□□ -2.21
SEC4YFL005W MRPL31P14063 131 aaPredicted RBP1.23□□□□□ -2.21
SEC4YFL005W IMP2P46972 177 aa1.23□□□□□ -2.21
SEC4YFL005W RPS22BQ3E7Y3 130 aaKnown RBP1.23□□□□□ -2.21
SEC4YFL005W URB1P34241 1764 aaKnown RBP1.22□□□□□ -2.21
SEC4YFL005W YCR085WP25650 117 aa1.22□□□□□ -2.21
SEC4YFL005W TOM6P33448 61 aa1.22□□□□□ -2.21
SEC4YFL005W YBR013CP38215 129 aa1.22□□□□□ -2.21
SEC4YFL005W AIM4P38305 123 aaPredicted RBP1.22□□□□□ -2.21
SEC4YFL005W AIM19P40502 157 aa1.22□□□□□ -2.21
SEC4YFL005W PAU5P43575 122 aa1.22□□□□□ -2.21
SEC4YFL005W MIC27P50945 234 aa1.22□□□□□ -2.21
SEC4YFL005W ICY1Q04329 127 aa1.22□□□□□ -2.21
SEC4YFL005W YRF1-2P40105 1681 aa1.22□□□□□ -2.21
SEC4YFL005W MOT1P32333 1867 aa1.22□□□□□ -2.21
SEC4YFL005W SRB8P25648 1427 aa1.22□□□□□ -2.21
SEC4YFL005W YRF1-1P0CX20 1796 aa1.21□□□□□ -2.22
SEC4YFL005W YRF1-5P0CX21 1796 aa1.21□□□□□ -2.22
SEC4YFL005W YRF1-8P0CX22 1796 aa1.21□□□□□ -2.22
SEC4YFL005W TY1B-NL2Q99337 1749 aaKnown RBP1.21□□□□□ -2.22
SEC4YFL005W FAS2P19097 1887 aaKnown RBP1.21□□□□□ -2.22
SEC4YFL005W YCR001WP25347 104 aa1.21□□□□□ -2.22
SEC4YFL005W YMR175W-AQ3E766 64 aa1.21□□□□□ -2.22
SEC4YFL005W RRT15Q3E811 62 aa1.21□□□□□ -2.22
SEC4YFL005W MGR2Q02889 113 aa1.2□□□□□ -2.22
SEC4YFL005W YOR343CQ12484 108 aa1.2□□□□□ -2.22
SEC4YFL005W YPL038W-AQ3E7B4 63 aa1.2□□□□□ -2.22
SEC4YFL005W YOL013W-AP0C272 63 aaPredicted RBP1.19□□□□□ -2.22
SEC4YFL005W NHP2P32495 156 aaPredicted RBP1.19□□□□□ -2.22
SEC4YFL005W PDX3P38075 228 aaKnown RBP1.19□□□□□ -2.22
SEC4YFL005W CWP2P43497 92 aa1.19□□□□□ -2.22
SEC4YFL005W COX19Q3E731 98 aa1.19□□□□□ -2.22
SEC4YFL005W YHR213W-AQ8TGT4 77 aa1.19□□□□□ -2.22
SEC4YFL005W MRX7P53869 86 aa1.18□□□□□ -2.22
SEC4YFL005W YKL065W-AQ2V2P2 73 aa1.18□□□□□ -2.22
SEC4YFL005W ECM29P38737 1868 aa1.18□□□□□ -2.22
SEC4YFL005W MMS22Q06164 1454 aa1.18□□□□□ -2.22
SEC4YFL005W POL2P21951 2222 aaKnown RBP1.17□□□□□ -2.22
SEC4YFL005W TY4B-HP0C2J7 1802 aa1.17□□□□□ -2.22
SEC4YFL005W PAU1P0CE88 120 aa1.17□□□□□ -2.22
SEC4YFL005W PAU14P0CE89 120 aa1.17□□□□□ -2.22
SEC4YFL005W PAU6P0CE90 120 aa1.17□□□□□ -2.22
SEC4YFL005W PAU18P0CE91 120 aa1.17□□□□□ -2.22
SEC4YFL005W PAU8P0CE92 120 aa1.17□□□□□ -2.22
SEC4YFL005W PAU11P0CE93 120 aa1.17□□□□□ -2.22
SEC4YFL005W MRPL38P35996 138 aaPredicted RBP1.17□□□□□ -2.22
SEC4YFL005W YBR292CP38357 123 aa1.17□□□□□ -2.22
SEC4YFL005W PAU13P38725 120 aa1.17□□□□□ -2.22
SEC4YFL005W PAU10Q03050 120 aa1.17□□□□□ -2.22
SEC4YFL005W PAU9Q3E770 120 aa1.17□□□□□ -2.22
SEC4YFL005W SEC16P48415 2195 aaKnown RBP1.17□□□□□ -2.22
SEC4YFL005W STT4P37297 1900 aa1.17□□□□□ -2.22
SEC4YFL005W YBL071CP38185 102 aa1.16□□□□□ -2.22
SEC4YFL005W YIL086CP40503 102 aa1.16□□□□□ -2.22
SEC4YFL005W MVB12P42939 101 aa1.16□□□□□ -2.22
SEC4YFL005W SPC1P46965 94 aa1.16□□□□□ -2.22
SEC4YFL005W PAU4P53427 120 aa1.16□□□□□ -2.22
SEC4YFL005W BSC4P53841 131 aa1.16□□□□□ -2.22
SEC4YFL005W YDR210WQ03482 75 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms