RNA–Protein interactions for RNA: Q0140

VAR1, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene VAR1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAR1Q0140 CHD1P32657 1468 aa-3.77□□□□□ -3.01
VAR1Q0140 TDA2P40045 126 aa-3.77□□□□□ -3.01
VAR1Q0140 MRX7P53869 86 aa-3.78□□□□□ -3.01
VAR1Q0140 SSN2P38931 1420 aa-3.79□□□□□ -3.02
VAR1Q0140 PAU19P0CE85 124 aa-3.8□□□□□ -3.02
VAR1Q0140 PAU3P25610 124 aa-3.8□□□□□ -3.02
VAR1Q0140 RSM18P40033 138 aa-3.8□□□□□ -3.02
VAR1Q0140 RPL38P49167 78 aaKnown RBP-3.8□□□□□ -3.02
VAR1Q0140 SAE3P89114 91 aa-3.8□□□□□ -3.02
VAR1Q0140 ICY1Q04329 127 aa-3.8□□□□□ -3.02
VAR1Q0140 GIM4P40005 111 aaKnown RBP-3.81□□□□□ -3.02
VAR1Q0140 SPC24Q04477 213 aa-3.81□□□□□ -3.02
VAR1Q0140 YBR292CP38357 123 aa-3.82□□□□□ -3.02
VAR1Q0140 RPS29AP41057 56 aaKnown RBP-3.84□□□□□ -3.02
VAR1Q0140 HKR1P41809 1802 aa-3.85□□□□□ -3.03
VAR1Q0140 YHR138CP38841 114 aaPredicted RBP-3.86□□□□□ -3.03
VAR1Q0140 GTT1P40582 234 aa-3.9□□□□□ -3.03
VAR1Q0140 PDX3P38075 228 aaKnown RBP-3.91□□□□□ -3.04
VAR1Q0140 RPS20P38701 121 aaKnown RBP-3.91□□□□□ -3.04
VAR1Q0140 YGR025WP53216 100 aa-3.91□□□□□ -3.04
VAR1Q0140 YIR021W-AQ3E739 70 aa-3.91□□□□□ -3.04
VAR1Q0140 PAU15P40585 124 aa-3.92□□□□□ -3.04
VAR1Q0140 YGL204CP53089 101 aa-3.92□□□□□ -3.04
VAR1Q0140 YCR099CP25657 155 aa-3.94□□□□□ -3.04
VAR1Q0140 YLR118CQ12354 227 aa-3.94□□□□□ -3.04
VAR1Q0140 PAU20Q08322 120 aa-3.98□□□□□ -3.05
VAR1Q0140 YRF1-1P0CX20 1796 aa-3.99□□□□□ -3.05
VAR1Q0140 YRF1-5P0CX21 1796 aa-3.99□□□□□ -3.05
VAR1Q0140 YRF1-8P0CX22 1796 aa-3.99□□□□□ -3.05
VAR1Q0140 SRB8P25648 1427 aa-3.99□□□□□ -3.05
VAR1Q0140 BUD4P47136 1447 aa-3.99□□□□□ -3.05
VAR1Q0140 TOR1P35169 2470 aa-3.99□□□□□ -3.05
VAR1Q0140 PAU16P35994 123 aa-4.01□□□□□ -3.05
VAR1Q0140 SMD2Q06217 110 aaKnown RBP-4.01□□□□□ -3.05
VAR1Q0140 YLR419WQ06698 1435 aaKnown RBP-4.03□□□□□ -3.05
VAR1Q0140 MRP17P28778 131 aa-4.04□□□□□ -3.06
VAR1Q0140 YDR278CQ05612 105 aa-4.04□□□□□ -3.06
VAR1Q0140 MYO2P19524 1574 aaKnown RBP-4.05□□□□□ -3.06
VAR1Q0140 MIX14Q04341 121 aa-4.06□□□□□ -3.06
VAR1Q0140 YLR361C-AQ3E795 98 aa-4.07□□□□□ -3.06
VAR1Q0140 YLR365WQ7LIF2 110 aa-4.07□□□□□ -3.06
VAR1Q0140 YNR034W-AQ3E841 98 aa-4.08□□□□□ -3.06
VAR1Q0140 SRB6P32570 121 aa-4.09□□□□□ -3.06
VAR1Q0140 COX7P10174 60 aa-4.12□□□□□ -3.07
VAR1Q0140 BPH1P25356 2167 aa-4.12□□□□□ -3.07
VAR1Q0140 SNA2P56508 79 aa-4.13□□□□□ -3.07
VAR1Q0140 TIM8P57744 87 aa-4.13□□□□□ -3.07
VAR1Q0140 NTE1Q04958 1679 aa-4.13□□□□□ -3.07
VAR1Q0140 YPR117WQ06116 2489 aa-4.15□□□□□ -3.07
VAR1Q0140 PAU6P0CE90 120 aa-4.15□□□□□ -3.07
VAR1Q0140 PAU18P0CE91 120 aa-4.15□□□□□ -3.07
VAR1Q0140 ECM12O13529 151 aa-4.16□□□□□ -3.08
VAR1Q0140 YCR095W-AQ3E787 52 aa-4.16□□□□□ -3.08
VAR1Q0140 RPB11P38902 120 aa-4.18□□□□□ -3.08
VAR1Q0140 TY1B-BRQ12193 1756 aa-4.2□□□□□ -3.08
VAR1Q0140 HUR1P45820 110 aa-4.22□□□□□ -3.08
VAR1Q0140 BUD23P25627 275 aaPredicted RBP-4.23□□□□□ -3.09
VAR1Q0140 NKP2Q06162 153 aa-4.23□□□□□ -3.09
VAR1Q0140 Q0032Q9ZZX7 96 aa-4.23□□□□□ -3.09
VAR1Q0140 YAR029WP39549 74 aa-4.25□□□□□ -3.09
VAR1Q0140 AIM19P40502 157 aa-4.26□□□□□ -3.09
VAR1Q0140 VMA21P41806 77 aa-4.26□□□□□ -3.09
VAR1Q0140 TEL1P38110 2787 aa-4.27□□□□□ -3.09
VAR1Q0140 PAU1P0CE88 120 aa-4.28□□□□□ -3.09
VAR1Q0140 PAU14P0CE89 120 aa-4.28□□□□□ -3.09
VAR1Q0140 PAU8P0CE92 120 aa-4.28□□□□□ -3.09
VAR1Q0140 PAU11P0CE93 120 aa-4.28□□□□□ -3.09
VAR1Q0140 PAU13P38725 120 aa-4.28□□□□□ -3.09
VAR1Q0140 PAU10Q03050 120 aa-4.28□□□□□ -3.09
VAR1Q0140 PAU9Q3E770 120 aa-4.28□□□□□ -3.09
VAR1Q0140 YBL044WP38194 122 aa-4.29□□□□□ -3.1
VAR1Q0140 YNL042W-BQ3E7Z2 85 aa-4.3□□□□□ -3.1
VAR1Q0140 MRP49P32388 137 aa-4.31□□□□□ -3.1
VAR1Q0140 APS2Q00381 147 aa-4.31□□□□□ -3.1
VAR1Q0140 YMR001C-AQ8TGS9 76 aa-4.31□□□□□ -3.1
VAR1Q0140 YBL071CP38185 102 aa-4.32□□□□□ -3.1
VAR1Q0140 ROX3P25046 220 aa-4.34□□□□□ -3.1
VAR1Q0140 MIC10Q96VH5 97 aa-4.35□□□□□ -3.11
VAR1Q0140 RGI1P40043 161 aaPredicted RBP-4.36□□□□□ -3.11
VAR1Q0140 BPT1P14772 1559 aa-4.38□□□□□ -3.11
VAR1Q0140 MDN1Q12019 4910 aaKnown RBP-4.39□□□□□ -3.11
VAR1Q0140 DNF3Q12674 1656 aa-4.4□□□□□ -3.11
VAR1Q0140 SWC7Q06707 132 aa-4.4□□□□□ -3.11
VAR1Q0140 YBR201C-AQ2V2Q3 67 aa-4.4□□□□□ -3.11
VAR1Q0140 TY1B-PR2P0C2J0 1756 aa-4.4□□□□□ -3.11
VAR1Q0140 PAU5P43575 122 aa-4.42□□□□□ -3.12
VAR1Q0140 PAU4P53427 120 aa-4.42□□□□□ -3.12
VAR1Q0140 YLR099W-AQ3E798 87 aa-4.42□□□□□ -3.12
VAR1Q0140 TOM6P33448 61 aa-4.43□□□□□ -3.12
VAR1Q0140 MMS1Q06211 1407 aa-4.44□□□□□ -3.12
VAR1Q0140 RTR2Q12378 196 aa-4.44□□□□□ -3.12
VAR1Q0140 YLR042CQ07990 161 aa-4.45□□□□□ -3.12
VAR1Q0140 SDH6Q3E785 79 aa-4.47□□□□□ -3.13
VAR1Q0140 TLG1Q03322 224 aa-4.51□□□□□ -3.13
VAR1Q0140 KRE5P22023 1365 aa-4.52□□□□□ -3.13
VAR1Q0140 DYN2Q02647 92 aa-4.52□□□□□ -3.13
VAR1Q0140 VMA7P39111 118 aa-4.54□□□□□ -3.14
VAR1Q0140 EDC1P53080 175 aaPredicted RBP-4.54□□□□□ -3.14
VAR1Q0140 FMP27Q06179 2628 aa-4.55□□□□□ -3.14
VAR1Q0140 TY1B-DR5P0C2I2 1755 aa-4.56□□□□□ -3.14
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms