RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C BPH1P25356 2167 aa2.32□□□□□ -2.04
RIF1YBR275C RPS31P05759 152 aaKnown RBP2.32□□□□□ -2.04
RIF1YBR275C YHL005CP38752 130 aa2.32□□□□□ -2.04
RIF1YBR275C YJR111CP47148 283 aaKnown RBP2.32□□□□□ -2.04
RIF1YBR275C LSM2P38203 95 aaKnown RBP2.31□□□□□ -2.04
RIF1YBR275C MIX17Q03667 156 aa2.31□□□□□ -2.04
RIF1YBR275C YOL160WQ08321 113 aa2.31□□□□□ -2.04
RIF1YBR275C YMR030W-AQ3E760 96 aa2.31□□□□□ -2.04
RIF1YBR275C YMR175W-AQ3E766 64 aa2.31□□□□□ -2.04
RIF1YBR275C YNK1P36010 153 aaKnown RBP2.31□□□□□ -2.04
RIF1YBR275C YDR114CQ04597 100 aa2.31□□□□□ -2.04
RIF1YBR275C FLO5P38894 1075 aa2.31□□□□□ -2.04
RIF1YBR275C YLR112WQ12130 139 aa2.31□□□□□ -2.04
RIF1YBR275C TY1A-BLQ12266 440 aa2.31□□□□□ -2.04
RIF1YBR275C YLR118CQ12354 227 aa2.31□□□□□ -2.04
RIF1YBR275C YHR212W-AP0CX91 67 aa2.31□□□□□ -2.04
RIF1YBR275C LST8P41318 303 aa2.31□□□□□ -2.04
RIF1YBR275C TY1A-MR1Q04215 440 aa2.31□□□□□ -2.04
RIF1YBR275C YIL046W-AQ3E7Z4 54 aa2.31□□□□□ -2.04
RIF1YBR275C MIC10Q96VH5 97 aa2.31□□□□□ -2.04
RIF1YBR275C YEL009C-AA0A023PZF2 135 aa2.3□□□□□ -2.04
RIF1YBR275C PAM17P36147 197 aa2.3□□□□□ -2.04
RIF1YBR275C MRPL37P36532 105 aa2.3□□□□□ -2.04
RIF1YBR275C YMR252CQ04814 134 aa2.3□□□□□ -2.04
RIF1YBR275C DCV1P43595 202 aa2.3□□□□□ -2.04
RIF1YBR275C PTR3P43606 678 aa2.3□□□□□ -2.04
RIF1YBR275C IMP2P46972 177 aa2.3□□□□□ -2.04
RIF1YBR275C YCR022CP25620 114 aa2.3□□□□□ -2.04
RIF1YBR275C MRP49P32388 137 aa2.3□□□□□ -2.04
RIF1YBR275C YOR268CQ08734 132 aa2.3□□□□□ -2.04
RIF1YBR275C VMA16P23968 213 aa2.3□□□□□ -2.04
RIF1YBR275C EDC2P40023 145 aaPredicted RBP2.3□□□□□ -2.04
RIF1YBR275C FLO1P32768 1537 aa2.3□□□□□ -2.04
RIF1YBR275C DNF2Q12675 1612 aa2.3□□□□□ -2.04
RIF1YBR275C SPS18P32572 300 aa2.3□□□□□ -2.04
RIF1YBR275C TY1A-NL1Q12391 440 aaKnown RBP2.3□□□□□ -2.04
RIF1YBR275C ZRT1P32804 376 aa2.29□□□□□ -2.04
RIF1YBR275C YER084WP40057 128 aa2.29□□□□□ -2.04
RIF1YBR275C YCR006CP25350 157 aa2.29□□□□□ -2.04
RIF1YBR275C RPL34BP40525 121 aaKnown RBP2.29□□□□□ -2.04
RIF1YBR275C RPL34AP87262 121 aaPredicted RBP2.29□□□□□ -2.04
RIF1YBR275C Q0297Q9ZZV8 51 aa2.29□□□□□ -2.04
RIF1YBR275C ATG8P38182 117 aaRIP-Chip data2.29□□□□□ -2.04not detected
RIF1YBR275C GRX5Q02784 150 aa2.29□□□□□ -2.04
RIF1YBR275C YDL157CQ12082 118 aa2.29□□□□□ -2.04
RIF1YBR275C WSC4P38739 605 aa2.28□□□□□ -2.04
RIF1YBR275C YJR085CP47131 105 aaKnown RBP2.28□□□□□ -2.04
RIF1YBR275C ATO3Q12359 275 aa2.28□□□□□ -2.04
RIF1YBR275C MRPL9P31334 269 aa2.28□□□□□ -2.04
RIF1YBR275C SPG1P50088 95 aa2.28□□□□□ -2.04
RIF1YBR275C YDL242WQ07746 117 aa2.28□□□□□ -2.04
RIF1YBR275C YGR039WP53225 103 aa2.28□□□□□ -2.05
RIF1YBR275C YTH1Q06102 208 aaPredicted RBP2.28□□□□□ -2.05
RIF1YBR275C FCY1Q12178 158 aa2.28□□□□□ -2.05
RIF1YBR275C HUB1Q6Q546 73 aa2.28□□□□□ -2.05
RIF1YBR275C OST5Q92316 86 aa2.28□□□□□ -2.05
RIF1YBR275C DUT1P33317 147 aa2.27□□□□□ -2.05
RIF1YBR275C NTE1Q04958 1679 aa2.27□□□□□ -2.05
RIF1YBR275C FYV4P38783 130 aaPredicted RBP2.27□□□□□ -2.05
RIF1YBR275C SMD3P43321 101 aaKnown RBP2.27□□□□□ -2.05
RIF1YBR275C DNF3Q12674 1656 aa2.27□□□□□ -2.05
RIF1YBR275C TRS20P38334 175 aa2.27□□□□□ -2.05
RIF1YBR275C LSM6Q06406 86 aaKnown RBP2.27□□□□□ -2.05
RIF1YBR275C ACC1Q00955 2233 aaKnown RBP2.27□□□□□ -2.05
RIF1YBR275C FMP49A0A023PZB3 126 aa2.27□□□□□ -2.05
RIF1YBR275C YKR032WP36127 104 aa2.27□□□□□ -2.05
RIF1YBR275C PRM7Q12459 698 aa2.27□□□□□ -2.05
RIF1YBR275C QCR8P08525 94 aa2.26□□□□□ -2.05
RIF1YBR275C YJL009WP47078 108 aa2.26□□□□□ -2.05
RIF1YBR275C YBL029C-AQ3E756 94 aa2.26□□□□□ -2.05
RIF1YBR275C YJL127C-BQ3E828 52 aa2.26□□□□□ -2.05
RIF1YBR275C YPS1P32329 569 aa2.26□□□□□ -2.05
RIF1YBR275C NUP192P47054 1683 aa2.26□□□□□ -2.05
RIF1YBR275C YBL081WP38180 368 aaKnown RBP2.26□□□□□ -2.05
RIF1YBR275C VMA21P41806 77 aa2.26□□□□□ -2.05
RIF1YBR275C PEX4P29340 183 aa2.26□□□□□ -2.05
RIF1YBR275C YOP1Q12402 180 aa2.26□□□□□ -2.05
RIF1YBR275C CMC2Q3E7A4 109 aa2.26□□□□□ -2.05
RIF1YBR275C AGE2P40529 298 aa2.25□□□□□ -2.05
RIF1YBR275C GPI19Q04082 140 aa2.25□□□□□ -2.05
RIF1YBR275C RPL23AP0CX41 137 aaKnown RBP2.25□□□□□ -2.05
RIF1YBR275C RPL23BP0CX42 137 aaKnown RBP2.25□□□□□ -2.05
RIF1YBR275C HUR1P45820 110 aa2.25□□□□□ -2.05
RIF1YBR275C NSG2P53898 299 aa2.25□□□□□ -2.05
RIF1YBR275C YKR070WP36151 352 aaKnown RBP2.25□□□□□ -2.05
RIF1YBR275C POP7P38291 140 aa2.25□□□□□ -2.05
RIF1YBR275C YDR119W-AQ2V2P9 66 aa2.25□□□□□ -2.05
RIF1YBR275C YER145C-AA0A023PYF4 145 aa2.25□□□□□ -2.05
RIF1YBR275C CPR1P14832 162 aaKnown RBP2.25□□□□□ -2.05
RIF1YBR275C YFL015CP43578 164 aa2.25□□□□□ -2.05
RIF1YBR275C IGD1P43598 195 aa2.25□□□□□ -2.05
RIF1YBR275C YDR010CQ12426 110 aa2.25□□□□□ -2.05
RIF1YBR275C RPS29AP41057 56 aaKnown RBP2.24□□□□□ -2.05
RIF1YBR275C SOK2P53438 785 aaPredicted RBP2.24□□□□□ -2.05
RIF1YBR275C MRPL33P20084 86 aa2.24□□□□□ -2.05
RIF1YBR275C YHR173CP38864 112 aa2.24□□□□□ -2.05
RIF1YBR275C PET8P38921 284 aa2.24□□□□□ -2.05
RIF1YBR275C YBR201C-AQ2V2Q3 67 aa2.24□□□□□ -2.05
RIF1YBR275C YPR117WQ06116 2489 aa2.24□□□□□ -2.05
RIF1YBR275C YLR363W-AQ3E747 85 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms