RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W ROX3P25046 220 aa3.77□□□□□ -1.81
VHC1YBR235W PET8P38921 284 aa3.77□□□□□ -1.81
VHC1YBR235W SUT2Q12286 268 aa3.77□□□□□ -1.81
VHC1YBR235W YPL038W-AQ3E7B4 63 aa3.77□□□□□ -1.81
VHC1YBR235W RFA2P26754 273 aaKnown RBP3.77□□□□□ -1.81
VHC1YBR235W ECM15P35195 104 aa3.77□□□□□ -1.81
VHC1YBR235W LSM6Q06406 86 aaKnown RBP3.77□□□□□ -1.81
VHC1YBR235W IGO2Q9P305 131 aa3.77□□□□□ -1.81
VHC1YBR235W YDL022C-AP0C5L6 82 aa3.77□□□□□ -1.81
VHC1YBR235W RPL42AP0CX27 106 aaKnown RBP3.77□□□□□ -1.81
VHC1YBR235W RPL42BP0CX28 106 aaKnown RBP3.77□□□□□ -1.81
VHC1YBR235W YKL044WP36092 106 aa3.77□□□□□ -1.81
VHC1YBR235W SVP26P38869 228 aa3.77□□□□□ -1.81
VHC1YBR235W RPL11BQ3E757 174 aaPredicted RBP3.77□□□□□ -1.81
VHC1YBR235W PBI2P0CT04 75 aaKnown RBP3.76□□□□□ -1.81
VHC1YBR235W RPL18AP0CX49 186 aaKnown RBP3.76□□□□□ -1.81
VHC1YBR235W RPL18BP0CX50 186 aaKnown RBP3.76□□□□□ -1.81
VHC1YBR235W VTC1P40046 129 aaRIP-Chip data3.76□□□□□ -1.81not detected
VHC1YBR235W YNR077CP53758 84 aa3.76□□□□□ -1.81
VHC1YBR235W NIP7Q08962 181 aaKnown RBP3.76□□□□□ -1.81
VHC1YBR235W YLR412C-AQ3E742 68 aa3.76□□□□□ -1.81
VHC1YBR235W YMR175W-AQ3E766 64 aa3.76□□□□□ -1.81
VHC1YBR235W YFL051CP43552 160 aa3.76□□□□□ -1.81
VHC1YBR235W UBC9P50623 157 aaPredicted RBP3.76□□□□□ -1.81
VHC1YBR235W MIC10Q96VH5 97 aa3.76□□□□□ -1.81
VHC1YBR235W Q0255P03881 472 aa3.76□□□□□ -1.81
VHC1YBR235W AQY1P0CD91 305 aa3.76□□□□□ -1.81
VHC1YBR235W MXR2P25566 168 aa3.76□□□□□ -1.81
VHC1YBR235W TOM7P53507 60 aa3.76□□□□□ -1.81
VHC1YBR235W RPC11Q04307 110 aaPredicted RBP3.76□□□□□ -1.81
VHC1YBR235W YOL118CQ08259 102 aa3.76□□□□□ -1.81
VHC1YBR235W YDL211CQ12121 372 aa3.76□□□□□ -1.81
VHC1YBR235W SWD3P38123 315 aa3.75□□□□□ -1.81
VHC1YBR235W CSH1P38287 376 aa3.75□□□□□ -1.81
VHC1YBR235W GGC1P38988 300 aa3.75□□□□□ -1.81
VHC1YBR235W YIA6P40556 373 aa3.75□□□□□ -1.81
VHC1YBR235W BPH1P25356 2167 aa3.75□□□□□ -1.81
VHC1YBR235W RPB8P20436 146 aa3.75□□□□□ -1.81
VHC1YBR235W YER187WP40102 141 aa3.74□□□□□ -1.81
VHC1YBR235W YDR381C-AQ3E6R5 114 aa3.74□□□□□ -1.81
VHC1YBR235W BEM2P39960 2167 aaKnown RBP3.74□□□□□ -1.81
VHC1YBR235W MED6P38782 295 aa3.74□□□□□ -1.81
VHC1YBR235W COX12Q01519 83 aa3.74□□□□□ -1.81
VHC1YBR235W EMC6Q12431 108 aa3.74□□□□□ -1.81
VHC1YBR235W HTL1Q9URQ5 78 aa3.74□□□□□ -1.81
VHC1YBR235W RPL11AP0C0W9 174 aaKnown RBP3.74□□□□□ -1.81
VHC1YBR235W YNL217WP40152 326 aa3.74□□□□□ -1.81
VHC1YBR235W YFR054CP43622 192 aa3.74□□□□□ -1.81
VHC1YBR235W YHP1Q04116 353 aa3.74□□□□□ -1.81
VHC1YBR235W RLM1Q12224 676 aa3.74□□□□□ -1.81
VHC1YBR235W SRX1P36077 127 aa3.73□□□□□ -1.81
VHC1YBR235W YHR180WP38868 163 aa3.73□□□□□ -1.81
VHC1YBR235W VEL1P53058 206 aa3.73□□□□□ -1.81
VHC1YBR235W NAG1Q8TGN9 163 aa3.73□□□□□ -1.81
VHC1YBR235W DSS4P32601 143 aa3.73□□□□□ -1.81
VHC1YBR235W SGN1P40561 250 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
VHC1YBR235W PBA1Q05778 276 aa3.73□□□□□ -1.81
VHC1YBR235W YPR053CQ6Q5F3 151 aa3.73□□□□□ -1.81
VHC1YBR235W YLR365WQ7LIF2 110 aa3.73□□□□□ -1.81
VHC1YBR235W YGR050CP53231 118 aa3.72□□□□□ -1.81
VHC1YBR235W RSM19P53733 91 aaPredicted RBP3.72□□□□□ -1.81
VHC1YBR235W UBC4P15731 148 aa3.72□□□□□ -1.81
VHC1YBR235W YKR032WP36127 104 aa3.72□□□□□ -1.81
VHC1YBR235W KEG1P43614 200 aa3.72□□□□□ -1.81
VHC1YBR235W IRC23Q08416 157 aa3.72□□□□□ -1.81
VHC1YBR235W SUT1P53032 299 aaKnown RBP3.71□□□□□ -1.81
VHC1YBR235W RPL15BP54780 204 aaPredicted RBP3.71□□□□□ -1.81
VHC1YBR235W HAL1Q01766 294 aa3.71□□□□□ -1.81
VHC1YBR235W YOR387CQ08910 206 aa3.71□□□□□ -1.81
VHC1YBR235W YBR126W-AQ8TGU7 68 aa3.71□□□□□ -1.81
VHC1YBR235W RPL30P14120 105 aaKnown RBP3.71□□□□□ -1.82
VHC1YBR235W RPL16BP26785 198 aaKnown RBP3.71□□□□□ -1.82
VHC1YBR235W CUZ1P53899 274 aa3.71□□□□□ -1.82
VHC1YBR235W YDR102CQ03864 110 aa3.71□□□□□ -1.82
VHC1YBR235W MIX14Q04341 121 aa3.71□□□□□ -1.82
VHC1YBR235W YPR108W-AQ3E7B3 70 aa3.71□□□□□ -1.82
VHC1YBR235W RPL28P02406 149 aaKnown RBP3.71□□□□□ -1.82
VHC1YBR235W YGR164WP53291 111 aa3.71□□□□□ -1.82
VHC1YBR235W ICY1Q04329 127 aa3.71□□□□□ -1.82
VHC1YBR235W RPL20AP0CX23 172 aaKnown RBP3.7□□□□□ -1.82
VHC1YBR235W RPL20BP0CX24 172 aaPredicted RBP3.7□□□□□ -1.82
VHC1YBR235W SIM1P40472 476 aa3.7□□□□□ -1.82
VHC1YBR235W GAT4P40569 121 aa3.7□□□□□ -1.82
VHC1YBR235W TOS8P53147 276 aa3.7□□□□□ -1.82
VHC1YBR235W PIR1Q03178 341 aa3.7□□□□□ -1.82
VHC1YBR235W SPO24Q3E752 67 aa3.7□□□□□ -1.82
VHC1YBR235W TDA8Q6B2U8 126 aa3.7□□□□□ -1.82
VHC1YBR235W RPL32P38061 130 aaKnown RBP3.7□□□□□ -1.82
VHC1YBR235W ATP23P53722 227 aa3.7□□□□□ -1.82
VHC1YBR235W YNL234WP53857 426 aa3.7□□□□□ -1.82
VHC1YBR235W YNL046WP53956 172 aa3.7□□□□□ -1.82
VHC1YBR235W YMR321CQ04898 105 aa3.7□□□□□ -1.82
VHC1YBR235W YSY6P38374 65 aa3.69□□□□□ -1.82
VHC1YBR235W HNT2P49775 206 aa3.69□□□□□ -1.82
VHC1YBR235W BRR2P32639 2163 aaKnown RBP3.69□□□□□ -1.82
VHC1YBR235W RPL16AP26784 199 aaKnown RBP3.69□□□□□ -1.82
VHC1YBR235W PRM7Q12459 698 aa3.69□□□□□ -1.82
VHC1YBR235W HMRA2P0CY13 119 aa3.69□□□□□ -1.82
VHC1YBR235W AIM19P40502 157 aa3.69□□□□□ -1.82
VHC1YBR235W PIR5P46999 287 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms