RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W YDL241WQ07738 123 aa4.58□□□□□ -1.68
CIT3YPR001W KRE5P22023 1365 aa4.58□□□□□ -1.68
CIT3YPR001W HYP2P23301 157 aaKnown RBP4.57□□□□□ -1.68
CIT3YPR001W MRPL15P36523 253 aa4.57□□□□□ -1.68
CIT3YPR001W YHP1Q04116 353 aa4.57□□□□□ -1.68
CIT3YPR001W PDR15Q04182 1529 aaKnown RBP4.57□□□□□ -1.68
CIT3YPR001W UBC5P15732 148 aa4.56□□□□□ -1.68
CIT3YPR001W SEC59P20048 519 aa4.56□□□□□ -1.68
CIT3YPR001W YCR099CP25657 155 aa4.56□□□□□ -1.68
CIT3YPR001W YEL067CP39978 195 aa4.56□□□□□ -1.68
CIT3YPR001W HYR1P40581 163 aaKnown RBP4.56□□□□□ -1.68
CIT3YPR001W RAD28Q12021 506 aa4.56□□□□□ -1.68
CIT3YPR001W DNF2Q12675 1612 aa4.56□□□□□ -1.68
CIT3YPR001W YRF1-3P0CX14 1859 aa4.56□□□□□ -1.68
CIT3YPR001W YRF1-7P0CX15 1859 aa4.56□□□□□ -1.68
CIT3YPR001W YGR164WP53291 111 aa4.56□□□□□ -1.68
CIT3YPR001W YRF1-6P53819 1859 aa4.56□□□□□ -1.68
CIT3YPR001W SOM1Q05676 74 aa4.56□□□□□ -1.68
CIT3YPR001W IRC19Q07843 230 aa4.56□□□□□ -1.68
CIT3YPR001W TY3B-IQ7LHG5 1498 aaKnown RBP4.55□□□□□ -1.68
CIT3YPR001W YEA6P39953 335 aa4.55□□□□□ -1.68
CIT3YPR001W YPR195CQ06594 109 aa4.55□□□□□ -1.68
CIT3YPR001W RAF1Q06891 181 aa4.55□□□□□ -1.68
CIT3YPR001W DNF1P32660 1571 aa4.54□□□□□ -1.68
CIT3YPR001W HAP1P0CE41 1502 aa4.54□□□□□ -1.68
CIT3YPR001W KRE1P17260 313 aa4.54□□□□□ -1.68
CIT3YPR001W YGR269WP40326 108 aa4.54□□□□□ -1.68
CIT3YPR001W KEI1Q06346 221 aa4.54□□□□□ -1.68
CIT3YPR001W MSB2P32334 1306 aa4.53□□□□□ -1.68
CIT3YPR001W PDR11P40550 1411 aa4.53□□□□□ -1.68
CIT3YPR001W SEC11P15367 167 aa4.53□□□□□ -1.68
CIT3YPR001W AIM18P38884 321 aa4.53□□□□□ -1.68
CIT3YPR001W ERG25P53045 309 aa4.53□□□□□ -1.68
CIT3YPR001W YMR103CQ04436 120 aa4.53□□□□□ -1.68
CIT3YPR001W HAP3P13434 144 aa4.52□□□□□ -1.69
CIT3YPR001W MAK31P23059 88 aa4.52□□□□□ -1.69
CIT3YPR001W PEX4P29340 183 aa4.52□□□□□ -1.69
CIT3YPR001W QCR10P37299 77 aa4.52□□□□□ -1.69
CIT3YPR001W PHO88P38264 188 aaPredicted RBP4.52□□□□□ -1.69
CIT3YPR001W YBR242WP38331 238 aa4.52□□□□□ -1.69
CIT3YPR001W YJR146WP47174 117 aa4.52□□□□□ -1.69
CIT3YPR001W YCL001W-AP87012 153 aa4.52□□□□□ -1.69
CIT3YPR001W NMA1Q06178 401 aaKnown RBP4.52□□□□□ -1.69
CIT3YPR001W YPR174CQ06616 221 aaPredicted RBP4.52□□□□□ -1.69
CIT3YPR001W GTT2Q12390 233 aa4.52□□□□□ -1.69
CIT3YPR001W SNF2P22082 1703 aa4.52□□□□□ -1.69
CIT3YPR001W VPS15P22219 1454 aa4.51□□□□□ -1.69
CIT3YPR001W SVP26P38869 228 aa4.51□□□□□ -1.69
CIT3YPR001W CCS1P40202 249 aaKnown RBP4.51□□□□□ -1.69
CIT3YPR001W DAD4P69851 72 aa4.51□□□□□ -1.69
CIT3YPR001W RPL13AQ12690 199 aaPredicted RBP4.51□□□□□ -1.69
CIT3YPR001W MED11Q99278 115 aa4.51□□□□□ -1.69
CIT3YPR001W TY3B-GQ99315 1547 aa4.51□□□□□ -1.69
CIT3YPR001W LYS2P07702 1392 aa4.5□□□□□ -1.69
CIT3YPR001W YGL041W-AP0C5N3 154 aa4.5□□□□□ -1.69
CIT3YPR001W FYV5P25585 152 aa4.5□□□□□ -1.69
CIT3YPR001W YFR035CP43608 114 aa4.5□□□□□ -1.69
CIT3YPR001W COX5BP00425 151 aa4.49□□□□□ -1.69
CIT3YPR001W YKL044WP36092 106 aa4.49□□□□□ -1.69
CIT3YPR001W YHL018WP38744 120 aaPredicted RBP4.49□□□□□ -1.69
CIT3YPR001W KNH1P50112 268 aa4.49□□□□□ -1.69
CIT3YPR001W RIF1P29539 1916 aa4.49□□□□□ -1.69
CIT3YPR001W COX8P04039 78 aa4.49□□□□□ -1.69
CIT3YPR001W MRPL44P19956 98 aa4.48□□□□□ -1.69
CIT3YPR001W AGA2P32781 87 aa4.48□□□□□ -1.69
CIT3YPR001W SNF11P38956 169 aa4.48□□□□□ -1.69
CIT3YPR001W TDA2P40045 126 aa4.48□□□□□ -1.69
CIT3YPR001W ERV14P53173 138 aa4.48□□□□□ -1.69
CIT3YPR001W RDS3Q06835 107 aaPredicted RBP4.48□□□□□ -1.69
CIT3YPR001W YDL157CQ12082 118 aa4.48□□□□□ -1.69
CIT3YPR001W POP3P53833 195 aaPredicted RBP4.47□□□□□ -1.69
CIT3YPR001W RKR1Q04781 1562 aa4.46□□□□□ -1.69
CIT3YPR001W RRP5Q05022 1729 aaKnown RBP4.45□□□□□ -1.7
CIT3YPR001W BNI1P41832 1953 aa4.45□□□□□ -1.7
CIT3YPR001W STF2P16965 84 aa4.44□□□□□ -1.7
CIT3YPR001W VPS68Q12016 184 aa4.44□□□□□ -1.7
CIT3YPR001W ULS1Q08562 1619 aa4.44□□□□□ -1.7
CIT3YPR001W YSP2Q06681 1438 aa4.44□□□□□ -1.7
CIT3YPR001W GPI19Q04082 140 aa4.43□□□□□ -1.7
CIT3YPR001W YMR090WQ04304 227 aaKnown RBP4.43□□□□□ -1.7
CIT3YPR001W FIT2Q08906 153 aa4.43□□□□□ -1.7
CIT3YPR001W YMR030W-AQ3E760 96 aa4.43□□□□□ -1.7
CIT3YPR001W YCR075W-AQ3E830 75 aa4.43□□□□□ -1.7
CIT3YPR001W TY2B-LR1P0C2J3 1770 aa4.43□□□□□ -1.7
CIT3YPR001W TY2B-FP0CX63 1770 aa4.43□□□□□ -1.7
CIT3YPR001W TY2B-GR2P0CX64 1770 aa4.43□□□□□ -1.7
CIT3YPR001W TY2B-CP25384 1770 aa4.43□□□□□ -1.7
CIT3YPR001W TY2B-DR2Q03494 1770 aa4.43□□□□□ -1.7
CIT3YPR001W TY1B-DR1Q03855 1755 aa4.43□□□□□ -1.7
CIT3YPR001W TY2B-DR3Q07791 1770 aaKnown RBP4.43□□□□□ -1.7
CIT3YPR001W TY2B-OR1Q12113 1770 aa4.43□□□□□ -1.7
CIT3YPR001W TY2B-DR1Q12472 1770 aa4.43□□□□□ -1.7
CIT3YPR001W TY2B-BQ12491 1770 aa4.43□□□□□ -1.7
CIT3YPR001W TY2B-OR2Q12501 1770 aa4.43□□□□□ -1.7
CIT3YPR001W TY1B-DR3Q99231 1755 aa4.43□□□□□ -1.7
CIT3YPR001W RPS25BP0C0T4 108 aaKnown RBP4.43□□□□□ -1.7
CIT3YPR001W HPA3P39979 161 aa4.43□□□□□ -1.7
CIT3YPR001W YPR153WQ06537 140 aa4.43□□□□□ -1.7
CIT3YPR001W RPS25AQ3E792 108 aaPredicted RBP4.43□□□□□ -1.7
CIT3YPR001W YHR022CP38763 256 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms