RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C YOR381W-AQ3E804 55 aa2.6□□□□□ -1.99
SSO2YMR183C TY4B-HP0C2J7 1802 aa2.59□□□□□ -1.99
SSO2YMR183C TY4B-JP47024 1803 aa2.59□□□□□ -1.99
SSO2YMR183C RPL26AP05743 127 aaKnown RBP2.59□□□□□ -1.99
SSO2YMR183C YER039C-AP0CD97 72 aa2.59□□□□□ -1.99
SSO2YMR183C YOL162WP0CF19 215 aa2.59□□□□□ -1.99
SSO2YMR183C YOR062CP36025 268 aa2.59□□□□□ -1.99
SSO2YMR183C SFT2P38166 215 aa2.59□□□□□ -1.99
SSO2YMR183C TIR3P40552 269 aa2.59□□□□□ -1.99
SSO2YMR183C GAT4P40569 121 aa2.59□□□□□ -1.99
SSO2YMR183C BOL2P53082 120 aa2.59□□□□□ -1.99
SSO2YMR183C RPL26BP53221 127 aaKnown RBP2.59□□□□□ -1.99
SSO2YMR183C PIR1Q03178 341 aa2.59□□□□□ -1.99
SSO2YMR183C TVP18Q04767 167 aa2.59□□□□□ -1.99
SSO2YMR183C ATG10Q07879 167 aa2.59□□□□□ -1.99
SSO2YMR183C HUT1Q12520 339 aa2.59□□□□□ -1.99
SSO2YMR183C RSF2P46974 1380 aa2.59□□□□□ -2
SSO2YMR183C SNF2P22082 1703 aa2.59□□□□□ -2
SSO2YMR183C MDH2P22133 377 aa2.58□□□□□ -2
SSO2YMR183C BUD23P25627 275 aaPredicted RBP2.58□□□□□ -2
SSO2YMR183C YPT31P38555 223 aaKnown RBP2.58□□□□□ -2
SSO2YMR183C UPS3Q04006 179 aa2.58□□□□□ -2
SSO2YMR183C KTI11Q3E840 82 aa2.58□□□□□ -2
SSO2YMR183C ADE6P38972 1358 aaKnown RBP2.58□□□□□ -2
SSO2YMR183C FKS1P38631 1876 aaKnown RBP2.58□□□□□ -2
SSO2YMR183C DUR1,2P32528 1835 aaKnown RBP2.57□□□□□ -2
SSO2YMR183C YLR236CA0A023PZG4 107 aa2.57□□□□□ -2
SSO2YMR183C KRE1P17260 313 aa2.57□□□□□ -2
SSO2YMR183C ERV15P38312 142 aa2.57□□□□□ -2
SSO2YMR183C DML1Q03652 475 aa2.57□□□□□ -2
SSO2YMR183C RNH202Q05635 350 aa2.57□□□□□ -2
SSO2YMR183C CSI2Q08054 341 aa2.57□□□□□ -2
SSO2YMR183C DDP1Q99321 188 aaKnown RBP2.57□□□□□ -2
SSO2YMR183C ANB1P19211 157 aa2.56□□□□□ -2
SSO2YMR183C YCR050CP25630 102 aa2.56□□□□□ -2
SSO2YMR183C RPB11P38902 120 aa2.56□□□□□ -2
SSO2YMR183C MOB1P40484 314 aa2.56□□□□□ -2
SSO2YMR183C PAC10P48363 199 aa2.56□□□□□ -2
SSO2YMR183C YGL230CP53074 147 aa2.56□□□□□ -2
SSO2YMR183C ATP19P81451 68 aa2.56□□□□□ -2
SSO2YMR183C CUE4Q04201 117 aaPredicted RBP2.56□□□□□ -2
SSO2YMR183C YOR015WQ12169 119 aa2.56□□□□□ -2
SSO2YMR183C VPS13Q07878 3144 aa2.56□□□□□ -2
SSO2YMR183C PEX4P29340 183 aa2.55□□□□□ -2
SSO2YMR183C MSB2P32334 1306 aa2.55□□□□□ -2
SSO2YMR183C YBR209WP38311 105 aa2.55□□□□□ -2
SSO2YMR183C MPM1P40364 252 aa2.55□□□□□ -2
SSO2YMR183C FLX1P40464 311 aa2.55□□□□□ -2
SSO2YMR183C NSE4P43124 402 aa2.55□□□□□ -2
SSO2YMR183C LSM8P47093 109 aaKnown RBP2.55□□□□□ -2
SSO2YMR183C THG1P53215 237 aaKnown RBP2.55□□□□□ -2
SSO2YMR183C MZM1Q03429 123 aaPredicted RBP2.55□□□□□ -2
SSO2YMR183C YPR195CQ06594 109 aa2.55□□□□□ -2
SSO2YMR183C RDS3Q06835 107 aaPredicted RBP2.55□□□□□ -2
SSO2YMR183C ATG41Q12048 136 aa2.55□□□□□ -2
SSO2YMR183C YPR013CQ12145 317 aa2.55□□□□□ -2
SSO2YMR183C SCS22Q6Q595 175 aa2.55□□□□□ -2
SSO2YMR183C RAS2P01120 322 aaKnown RBP2.54□□□□□ -2
SSO2YMR183C SPS2P08459 502 aa2.54□□□□□ -2
SSO2YMR183C INO4P13902 151 aa2.54□□□□□ -2
SSO2YMR183C MIG1P27705 504 aa2.54□□□□□ -2
SSO2YMR183C PHO88P38264 188 aaPredicted RBP2.54□□□□□ -2
SSO2YMR183C GAA1P39012 614 aa2.54□□□□□ -2
SSO2YMR183C YJR146WP47174 117 aa2.54□□□□□ -2
SSO2YMR183C YML079WQ03629 201 aa2.54□□□□□ -2
SSO2YMR183C UPS1Q05776 175 aa2.54□□□□□ -2
SSO2YMR183C YLR042CQ07990 161 aa2.54□□□□□ -2
SSO2YMR183C RAD28Q12021 506 aa2.54□□□□□ -2
SSO2YMR183C AGA2P32781 87 aa2.53□□□□□ -2
SSO2YMR183C YEL067CP39978 195 aa2.53□□□□□ -2
SSO2YMR183C YHP1Q04116 353 aa2.53□□□□□ -2
SSO2YMR183C YPR174CQ06616 221 aaPredicted RBP2.53□□□□□ -2
SSO2YMR183C ZEO1Q08245 113 aa2.53□□□□□ -2
SSO2YMR183C YOR097CQ12274 175 aaPredicted RBP2.53□□□□□ -2
SSO2YMR183C VAR1P02381 398 aa2.52□□□□□ -2.01
SSO2YMR183C CLB6P32943 380 aa2.52□□□□□ -2.01
SSO2YMR183C SDH4P37298 181 aa2.52□□□□□ -2.01
SSO2YMR183C YAL064WP39711 94 aa2.52□□□□□ -2.01
SSO2YMR183C DIE2P50076 525 aa2.52□□□□□ -2.01
SSO2YMR183C MPC1P53157 130 aaKnown RBP2.52□□□□□ -2.01
SSO2YMR183C YMR252CQ04814 134 aa2.52□□□□□ -2.01
SSO2YMR183C OCA6Q12454 224 aa2.52□□□□□ -2.01
SSO2YMR183C APC1P53886 1748 aa2.51□□□□□ -2.01
SSO2YMR183C YGL041W-AP0C5N3 154 aa2.51□□□□□ -2.01
SSO2YMR183C SEC11P15367 167 aa2.51□□□□□ -2.01
SSO2YMR183C YAR029WP39549 74 aa2.51□□□□□ -2.01
SSO2YMR183C YGR269WP40326 108 aa2.51□□□□□ -2.01
SSO2YMR183C YDL241WQ07738 123 aa2.51□□□□□ -2.01
SSO2YMR183C YOR385WQ08909 290 aa2.51□□□□□ -2.01
SSO2YMR183C RTR2Q12378 196 aa2.51□□□□□ -2.01
SSO2YMR183C YLR419WQ06698 1435 aaKnown RBP2.51□□□□□ -2.01
SSO2YMR183C YHL042WP38729 150 aa2.5□□□□□ -2.01
SSO2YMR183C YHL018WP38744 120 aaPredicted RBP2.5□□□□□ -2.01
SSO2YMR183C SVP26P38869 228 aa2.5□□□□□ -2.01
SSO2YMR183C RCE1Q03530 315 aa2.5□□□□□ -2.01
SSO2YMR183C KEI1Q06346 221 aa2.5□□□□□ -2.01
SSO2YMR183C RAF1Q06891 181 aa2.5□□□□□ -2.01
SSO2YMR183C COX8P04039 78 aa2.49□□□□□ -2.01
SSO2YMR183C STF2P16965 84 aa2.49□□□□□ -2.01
SSO2YMR183C TMA19P35691 167 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 146 ms