RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP188	YML103C	FYV5	P25585	152 aa		0.74	□□□□□ -2.29
NUP188	YML103C	YCR050C	P25630	102 aa		0.74	□□□□□ -2.29
NUP188	YML103C	RPB11	P38902	120 aa		0.74	□□□□□ -2.29
NUP188	YML103C	YJL009W	P47078	108 aa		0.74	□□□□□ -2.29
NUP188	YML103C	ERV14	P53173	138 aa		0.74	□□□□□ -2.29
NUP188	YML103C	TMA23	Q03525	211 aa		0.74	□□□□□ -2.29
NUP188	YML103C	DDP1	Q99321	188 aa	Known RBP	0.74	□□□□□ -2.29
NUP188	YML103C	FAB1	P34756	2278 aa		0.74	□□□□□ -2.29
NUP188	YML103C	YOR304C-A	O14468	76 aa		0.74	□□□□□ -2.29
NUP188	YML103C	SEC59	P20048	519 aa		0.74	□□□□□ -2.29
NUP188	YML103C	MRPL11	P36521	249 aa	Predicted RBP	0.74	□□□□□ -2.29
NUP188	YML103C	ATG8	P38182	117 aa	RIP-Chip data	0.74	□□□□□ -2.29	not detected
NUP188	YML103C	GPI19	Q04082	140 aa		0.74	□□□□□ -2.29
NUP188	YML103C	COA6	Q3E846	104 aa		0.74	□□□□□ -2.29
NUP188	YML103C	TDA2	P40045	126 aa		0.74	□□□□□ -2.29
NUP188	YML103C	HPM1	P40481	377 aa		0.74	□□□□□ -2.29
NUP188	YML103C	TIM8	P57744	87 aa		0.74	□□□□□ -2.29
NUP188	YML103C	RPS1A	P33442	255 aa	Known RBP	0.74	□□□□□ -2.29
NUP188	YML103C	HPA2	Q06592	156 aa		0.74	□□□□□ -2.29
NUP188	YML103C	UTP11	P34247	250 aa	Predicted RBP	0.73	□□□□□ -2.29
NUP188	YML103C	IPT1	P38954	527 aa		0.73	□□□□□ -2.29
NUP188	YML103C	YAR064W	P39563	99 aa		0.73	□□□□□ -2.29
NUP188	YML103C	YDL241W	Q07738	123 aa		0.73	□□□□□ -2.29
NUP188	YML103C	YLR118C	Q12354	227 aa		0.73	□□□□□ -2.29
NUP188	YML103C	ECM5	Q03214	1411 aa		0.73	□□□□□ -2.29
NUP188	YML103C	YBR027C	P38220	110 aa		0.73	□□□□□ -2.29
NUP188	YML103C	SED1	Q01589	338 aa		0.73	□□□□□ -2.29
NUP188	YML103C	YLR296W	Q05898	108 aa		0.73	□□□□□ -2.29
NUP188	YML103C	YIR021W-A	Q3E739	70 aa		0.73	□□□□□ -2.29
NUP188	YML103C	NMT1	P14743	455 aa		0.73	□□□□□ -2.29
NUP188	YML103C	YAL064W	P39711	94 aa		0.73	□□□□□ -2.29
NUP188	YML103C	GTT2	Q12390	233 aa		0.73	□□□□□ -2.29
NUP188	YML103C	RPL33A	P05744	107 aa	Known RBP	0.72	□□□□□ -2.29
NUP188	YML103C	YCL042W	P25572	119 aa		0.72	□□□□□ -2.29
NUP188	YML103C	YLR099W-A	Q3E798	87 aa		0.72	□□□□□ -2.29
NUP188	YML103C	COX5B	P00425	151 aa		0.72	□□□□□ -2.29
NUP188	YML103C	YEL008W	P40001	126 aa		0.72	□□□□□ -2.29
NUP188	YML103C	SEN15	Q04675	128 aa		0.72	□□□□□ -2.29
NUP188	YML103C	SNT2	P53127	1403 aa		0.72	□□□□□ -2.29
NUP188	YML103C	VMA21	P41806	77 aa		0.72	□□□□□ -2.29
NUP188	YML103C	SFT1	P43682	97 aa		0.72	□□□□□ -2.29
NUP188	YML103C	SWC7	Q06707	132 aa		0.72	□□□□□ -2.29
NUP188	YML103C	YOR385W	Q08909	290 aa		0.72	□□□□□ -2.29
NUP188	YML103C	MDS3	P53094	1487 aa		0.71	□□□□□ -2.3
NUP188	YML103C	RPO41	P13433	1351 aa	Known RBP	0.71	□□□□□ -2.3
NUP188	YML103C	PAU21	P0CE86	164 aa		0.71	□□□□□ -2.3
NUP188	YML103C	PAU22	P0CE87	164 aa		0.71	□□□□□ -2.3
NUP188	YML103C	ARL3	Q02804	198 aa		0.71	□□□□□ -2.3
NUP188	YML103C	YMR122C	Q03879	124 aa		0.71	□□□□□ -2.3
NUP188	YML103C	CCW12	Q12127	133 aa		0.71	□□□□□ -2.3
NUP188	YML103C	YHR213W	P0CI67	198 aa		0.71	□□□□□ -2.3
NUP188	YML103C	YCR099C	P25657	155 aa		0.71	□□□□□ -2.3
NUP188	YML103C	RUB1	Q03919	77 aa		0.71	□□□□□ -2.3
NUP188	YML103C	RPS22A	P0C0W1	130 aa	Known RBP	0.71	□□□□□ -2.3
NUP188	YML103C	LCL2	Q08045	131 aa		0.71	□□□□□ -2.3
NUP188	YML103C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.71	□□□□□ -2.3
NUP188	YML103C	YHR212W-A	P0CX91	67 aa		0.7	□□□□□ -2.3
NUP188	YML103C	SRB6	P32570	121 aa		0.7	□□□□□ -2.3
NUP188	YML103C	GSP1	P32835	219 aa	Known RBP	0.7	□□□□□ -2.3
NUP188	YML103C	SNF11	P38956	169 aa		0.7	□□□□□ -2.3
NUP188	YML103C	HSP150	P32478	413 aa		0.7	□□□□□ -2.3
NUP188	YML103C	YHL037C	P38733	133 aa		0.7	□□□□□ -2.3
NUP188	YML103C	AIM18	P38884	321 aa		0.7	□□□□□ -2.3
NUP188	YML103C	RGI1	P40043	161 aa	Predicted RBP	0.7	□□□□□ -2.3
NUP188	YML103C	LST8	P41318	303 aa		0.7	□□□□□ -2.3
NUP188	YML103C	YFL051C	P43552	160 aa		0.7	□□□□□ -2.3
NUP188	YML103C	BRP1	P53194	125 aa		0.7	□□□□□ -2.3
NUP188	YML103C	SPP41	P38904	1435 aa		0.7	□□□□□ -2.3
NUP188	YML103C	DAD1	Q12248	94 aa		0.7	□□□□□ -2.3
NUP188	YML103C	UGX2	P32772	223 aa		0.7	□□□□□ -2.3
NUP188	YML103C	YIL014C-A	Q02598	104 aa		0.7	□□□□□ -2.3
NUP188	YML103C	YGL014C-A	P0C5N1	53 aa		0.69	□□□□□ -2.3
NUP188	YML103C	YCR001W	P25347	104 aa		0.69	□□□□□ -2.3
NUP188	YML103C	SRX1	P36077	127 aa		0.69	□□□□□ -2.3
NUP188	YML103C	GTT1	P40582	234 aa		0.69	□□□□□ -2.3
NUP188	YML103C	CMC4	Q3E7A9	73 aa		0.69	□□□□□ -2.3
NUP188	YML103C	YHR213W-B	Q8TGK1	99 aa		0.69	□□□□□ -2.3
NUP188	YML103C	TRM732	Q03496	1420 aa		0.69	□□□□□ -2.3
NUP188	YML103C	YNL122C	P53921	115 aa	Predicted RBP	0.69	□□□□□ -2.3
NUP188	YML103C	YKL044W	P36092	106 aa		0.69	□□□□□ -2.3
NUP188	YML103C	MVB12	P42939	101 aa		0.69	□□□□□ -2.3
NUP188	YML103C	FYV7	Q12247	151 aa		0.69	□□□□□ -2.3
NUP188	YML103C	YGL041C-B	Q3E750	60 aa		0.69	□□□□□ -2.3
NUP188	YML103C	AVO2	Q04749	426 aa		0.69	□□□□□ -2.3
NUP188	YML103C	YLR363W-A	Q3E747	85 aa		0.69	□□□□□ -2.3
NUP188	YML103C	AQY2	P0CD90	149 aa		0.68	□□□□□ -2.3
NUP188	YML103C	RPL40A	P0CH08	128 aa	Known RBP	0.68	□□□□□ -2.3
NUP188	YML103C	RPL40B	P0CH09	128 aa	Known RBP	0.68	□□□□□ -2.3
NUP188	YML103C	COA4	Q05809	96 aa		0.68	□□□□□ -2.3
NUP188	YML103C	ENV10	Q99382	181 aa		0.68	□□□□□ -2.3
NUP188	YML103C	MGR2	Q02889	113 aa		0.68	□□□□□ -2.3
NUP188	YML103C	YLR042C	Q07990	161 aa		0.68	□□□□□ -2.3
NUP188	YML103C	OST5	Q92316	86 aa		0.68	□□□□□ -2.3
NUP188	YML103C	RPL22A	P05749	121 aa	Known RBP	0.68	□□□□□ -2.3
NUP188	YML103C	MRPL31	P14063	131 aa	Predicted RBP	0.68	□□□□□ -2.3
NUP188	YML103C	PAM16	P42949	149 aa		0.68	□□□□□ -2.3
NUP188	YML103C	YPL261C	Q08976	102 aa		0.68	□□□□□ -2.3
NUP188	YML103C	YOR097C	Q12274	175 aa	Predicted RBP	0.68	□□□□□ -2.3
NUP188	YML103C	YPK9	Q12697	1472 aa		0.68	□□□□□ -2.3
NUP188	YML103C	ICS3	P47034	131 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms