RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W IRC25Q07951 179 aa7.54□□□□□ -1.2
SFP1YLR403W CPD1P53314 239 aa7.53□□□□□ -1.2
SFP1YLR403W YOR387CQ08910 206 aa7.53□□□□□ -1.2
SFP1YLR403W AUR1P36107 401 aaPredicted RBP7.53□□□□□ -1.2
SFP1YLR403W SDS23P53172 527 aa7.53□□□□□ -1.2
SFP1YLR403W YDL180WQ12301 547 aa7.53□□□□□ -1.2
SFP1YLR403W NPC2Q12408 173 aa7.53□□□□□ -1.2
SFP1YLR403W YBL081WP38180 368 aaKnown RBP7.52□□□□□ -1.21
SFP1YLR403W GPI2P46961 280 aa7.52□□□□□ -1.21
SFP1YLR403W MPD1Q12404 318 aaKnown RBP7.52□□□□□ -1.21
SFP1YLR403W OM14P38325 134 aa7.51□□□□□ -1.21
SFP1YLR403W YHL042WP38729 150 aa7.51□□□□□ -1.21
SFP1YLR403W YGL118CP53132 145 aa7.51□□□□□ -1.21
SFP1YLR403W TPC1P53257 314 aa7.51□□□□□ -1.21
SFP1YLR403W YHM2Q04013 314 aa7.51□□□□□ -1.21
SFP1YLR403W YMR175W-AQ3E766 64 aa7.51□□□□□ -1.21
SFP1YLR403W MST27P53176 234 aa7.51□□□□□ -1.21
SFP1YLR403W COX12Q01519 83 aa7.51□□□□□ -1.21
SFP1YLR403W IGO2Q9P305 131 aa7.51□□□□□ -1.21
SFP1YLR403W CIS3P47001 227 aa7.5□□□□□ -1.21
SFP1YLR403W VPS55P47111 140 aa7.5□□□□□ -1.21
SFP1YLR403W YMR317WQ04893 1140 aa7.5□□□□□ -1.21
SFP1YLR403W YRA2P36036 203 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
SFP1YLR403W YFR054CP43622 192 aa7.5□□□□□ -1.21
SFP1YLR403W TDA4P47153 279 aa7.5□□□□□ -1.21
SFP1YLR403W BRP1P53194 125 aa7.5□□□□□ -1.21
SFP1YLR403W MCH4Q08268 501 aa7.5□□□□□ -1.21
SFP1YLR403W BXI1P48558 297 aa7.49□□□□□ -1.21
SFP1YLR403W SMT3Q12306 101 aaKnown RBP7.49□□□□□ -1.21
SFP1YLR403W YPL038W-AQ3E7B4 63 aa7.49□□□□□ -1.21
SFP1YLR403W YCR006CP25350 157 aa7.48□□□□□ -1.21
SFP1YLR403W BUD8P41698 603 aa7.48□□□□□ -1.21
SFP1YLR403W YIL014C-AQ02598 104 aa7.48□□□□□ -1.21
SFP1YLR403W YHR139C-AO13536 103 aa7.47□□□□□ -1.21
SFP1YLR403W CRH1P53301 507 aa7.47□□□□□ -1.21
SFP1YLR403W RPS10AQ08745 105 aaPredicted RBP7.47□□□□□ -1.21
SFP1YLR403W YMR316C-AI2HB70 103 aa7.47□□□□□ -1.21
SFP1YLR403W FZF1P32805 299 aa7.47□□□□□ -1.21
SFP1YLR403W YER181CP40097 107 aa7.47□□□□□ -1.21
SFP1YLR403W MIM1Q08176 113 aa7.47□□□□□ -1.21
SFP1YLR403W YPR064WQ12492 139 aa7.47□□□□□ -1.21
SFP1YLR403W CSR2Q12734 1121 aa7.47□□□□□ -1.21
SFP1YLR403W RPS22AP0C0W1 130 aaKnown RBP7.46□□□□□ -1.22
SFP1YLR403W UBC4P15731 148 aa7.46□□□□□ -1.22
SFP1YLR403W FUN19P28003 413 aaPredicted RBP7.46□□□□□ -1.22
SFP1YLR403W RPS21BQ3E754 87 aaKnown RBP7.46□□□□□ -1.22
SFP1YLR403W YPR096CO13587 100 aa7.45□□□□□ -1.22
SFP1YLR403W SKI6P46948 246 aaPredicted RBP7.45□□□□□ -1.22
SFP1YLR403W RPC11Q04307 110 aaPredicted RBP7.45□□□□□ -1.22
SFP1YLR403W RPL30P14120 105 aaKnown RBP7.45□□□□□ -1.22
SFP1YLR403W RRT13P40042 185 aa7.45□□□□□ -1.22
SFP1YLR403W YDR209CQ03480 137 aa7.45□□□□□ -1.22
SFP1YLR403W IES4Q08561 116 aa7.45□□□□□ -1.22
SFP1YLR403W RRT15Q3E811 62 aa7.45□□□□□ -1.22
SFP1YLR403W GAT4P40569 121 aa7.44□□□□□ -1.22
SFP1YLR403W FIP1P45976 327 aa7.44□□□□□ -1.22
SFP1YLR403W COX17Q12287 69 aa7.44□□□□□ -1.22
SFP1YLR403W DIF1O13577 133 aa7.43□□□□□ -1.22
SFP1YLR403W BET1P22804 142 aa7.43□□□□□ -1.22
SFP1YLR403W VHS2P40463 436 aa7.43□□□□□ -1.22
SFP1YLR403W YPL062WQ02781 134 aa7.43□□□□□ -1.22
SFP1YLR403W YLR302CO13544 120 aa7.43□□□□□ -1.22
SFP1YLR403W YIL163CP40448 117 aa7.43□□□□□ -1.22
SFP1YLR403W RPL20AP0CX23 172 aaKnown RBP7.42□□□□□ -1.22
SFP1YLR403W RPL20BP0CX24 172 aaPredicted RBP7.42□□□□□ -1.22
SFP1YLR403W AQY1P0CD91 305 aa7.42□□□□□ -1.22
SFP1YLR403W YKL044WP36092 106 aa7.42□□□□□ -1.22
SFP1YLR403W CYR1P08678 2026 aaKnown RBP7.41□□□□□ -1.22
SFP1YLR403W GGC1P38988 300 aa7.41□□□□□ -1.22
SFP1YLR403W FIG2P25653 1609 aa7.41□□□□□ -1.22
SFP1YLR403W Q0255P03881 472 aa7.4□□□□□ -1.22
SFP1YLR403W RPP1P38786 293 aa7.4□□□□□ -1.22
SFP1YLR403W OST1P41543 476 aaKnown RBP7.4□□□□□ -1.22
SFP1YLR403W ATP23P53722 227 aa7.4□□□□□ -1.22
SFP1YLR403W CSL4P53859 292 aaPredicted RBP7.4□□□□□ -1.22
SFP1YLR403W YNL046WP53956 172 aa7.4□□□□□ -1.22
SFP1YLR403W TIM18Q08749 192 aa7.4□□□□□ -1.22
SFP1YLR403W SUT2Q12286 268 aa7.4□□□□□ -1.22
SFP1YLR403W REC114P32841 428 aa7.4□□□□□ -1.23
SFP1YLR403W YOR186WQ08560 144 aa7.4□□□□□ -1.23
SFP1YLR403W PIS1P06197 220 aaKnown RBP7.39□□□□□ -1.23
SFP1YLR403W CSH1P38287 376 aa7.39□□□□□ -1.23
SFP1YLR403W NIP7Q08962 181 aaKnown RBP7.39□□□□□ -1.23
SFP1YLR403W YDR381C-AQ3E6R5 114 aa7.39□□□□□ -1.23
SFP1YLR403W MIC10Q96VH5 97 aa7.39□□□□□ -1.23
SFP1YLR403W EAF6P47128 113 aa7.39□□□□□ -1.23
SFP1YLR403W SHH4Q06236 168 aa7.39□□□□□ -1.23
SFP1YLR403W MRPL31P14063 131 aaPredicted RBP7.38□□□□□ -1.23
SFP1YLR403W SFT2P38166 215 aa7.38□□□□□ -1.23
SFP1YLR403W LSM6Q06406 86 aaKnown RBP7.38□□□□□ -1.23
SFP1YLR403W MET32Q12041 191 aa7.38□□□□□ -1.23
SFP1YLR403W EMC6Q12431 108 aa7.38□□□□□ -1.23
SFP1YLR403W IMP1P28627 190 aa7.37□□□□□ -1.23
SFP1YLR403W QRI5P32344 111 aa7.37□□□□□ -1.23
SFP1YLR403W DSE2P38844 325 aa7.37□□□□□ -1.23
SFP1YLR403W SLG1P54867 378 aa7.37□□□□□ -1.23
SFP1YLR403W HAL1Q01766 294 aa7.37□□□□□ -1.23
SFP1YLR403W YFL019CP43576 117 aa7.37□□□□□ -1.23
SFP1YLR403W RRS1Q08746 203 aaKnown RBP7.37□□□□□ -1.23
SFP1YLR403W SMD1Q02260 146 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms