RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C NTE1Q04958 1679 aa1.54□□□□□ -2.16
LSM6YDR378C COX5BP00425 151 aa1.53□□□□□ -2.16
LSM6YDR378C SIN3P22579 1536 aa1.53□□□□□ -2.16
LSM6YDR378C SRL3P36167 246 aa1.53□□□□□ -2.16
LSM6YDR378C SEN15Q04675 128 aa1.53□□□□□ -2.16
LSM6YDR378C YHR213W-BQ8TGK1 99 aa1.53□□□□□ -2.16
LSM6YDR378C VPS15P22219 1454 aa1.52□□□□□ -2.17
LSM6YDR378C SCC2Q04002 1493 aa1.52□□□□□ -2.17
LSM6YDR378C YGR201CP42936 225 aa1.52□□□□□ -2.17
LSM6YDR378C YCL001W-AP87012 153 aa1.52□□□□□ -2.17
LSM6YDR378C MGR2Q02889 113 aa1.52□□□□□ -2.17
LSM6YDR378C MHF1Q3E835 90 aa1.52□□□□□ -2.17
LSM6YDR378C PDR10P51533 1564 aa1.51□□□□□ -2.17
LSM6YDR378C NUP159P40477 1460 aa1.51□□□□□ -2.17
LSM6YDR378C ROM2P51862 1356 aaKnown RBP1.51□□□□□ -2.17
LSM6YDR378C RPS22AP0C0W1 130 aaKnown RBP1.51□□□□□ -2.17
LSM6YDR378C SUI1P32911 108 aaKnown RBP1.51□□□□□ -2.17
LSM6YDR378C YAP3P38749 330 aa1.51□□□□□ -2.17
LSM6YDR378C HHY1P39982 102 aa1.51□□□□□ -2.17
LSM6YDR378C DIE2P50076 525 aa1.51□□□□□ -2.17
LSM6YDR378C RPS22BQ3E7Y3 130 aaKnown RBP1.51□□□□□ -2.17
LSM6YDR378C DOP1Q03921 1698 aa1.51□□□□□ -2.17
LSM6YDR378C SPP41P38904 1435 aa1.5□□□□□ -2.17
LSM6YDR378C TY1B-BRQ12193 1756 aa1.5□□□□□ -2.17
LSM6YDR378C TY1B-GR3Q12316 1755 aa1.5□□□□□ -2.17
LSM6YDR378C TY1B-ORQ92393 1755 aa1.5□□□□□ -2.17
LSM6YDR378C RPS1BP23248 255 aaKnown RBP1.5□□□□□ -2.17
LSM6YDR378C FYV5P25585 152 aa1.5□□□□□ -2.17
LSM6YDR378C IRC21Q04772 201 aa1.5□□□□□ -2.17
LSM6YDR378C YMR320WQ04897 101 aa1.5□□□□□ -2.17
LSM6YDR378C TRM732Q03496 1420 aa1.49□□□□□ -2.17
LSM6YDR378C TOM1Q03280 3268 aa1.49□□□□□ -2.17
LSM6YDR378C RAF1Q06891 181 aa1.49□□□□□ -2.17
LSM6YDR378C DDP1Q99321 188 aaKnown RBP1.49□□□□□ -2.17
LSM6YDR378C BUD3P25558 1636 aa1.48□□□□□ -2.17
LSM6YDR378C YGL014C-AP0C5N1 53 aa1.48□□□□□ -2.17
LSM6YDR378C LSM1P47017 172 aaKnown RBP1.48□□□□□ -2.17
LSM6YDR378C LSM8P47093 109 aaKnown RBP1.48□□□□□ -2.17
LSM6YDR378C RBL2P48606 106 aaKnown RBP1.48□□□□□ -2.17
LSM6YDR378C SPG1P50088 95 aa1.48□□□□□ -2.17
LSM6YDR378C SOM1Q05676 74 aa1.48□□□□□ -2.17
LSM6YDR378C VPS13Q07878 3144 aa1.47□□□□□ -2.17
LSM6YDR378C PHB1P40961 287 aa1.47□□□□□ -2.17
LSM6YDR378C YJL009WP47078 108 aa1.47□□□□□ -2.17
LSM6YDR378C HHO1P53551 258 aa1.47□□□□□ -2.17
LSM6YDR378C COF1Q03048 143 aaKnown RBP1.47□□□□□ -2.17
LSM6YDR378C NUP170P38181 1502 aa1.46□□□□□ -2.18
LSM6YDR378C MMS22Q06164 1454 aa1.46□□□□□ -2.18
LSM6YDR378C YNL019CP53975 284 aa1.46□□□□□ -2.18
LSM6YDR378C YMR122CQ03879 124 aa1.46□□□□□ -2.18
LSM6YDR378C NAT5Q08689 176 aa1.46□□□□□ -2.18
LSM6YDR378C USO1P25386 1790 aa1.46□□□□□ -2.18
LSM6YDR378C ARO1P08566 1588 aaKnown RBP1.46□□□□□ -2.18
LSM6YDR378C YGR039WP53225 103 aa1.45□□□□□ -2.18
LSM6YDR378C TOP2P06786 1428 aaKnown RBP1.45□□□□□ -2.18
LSM6YDR378C NUM1Q00402 2748 aa1.45□□□□□ -2.18
LSM6YDR378C TY2B-LR1P0C2J3 1770 aa1.44□□□□□ -2.18
LSM6YDR378C TY2B-FP0CX63 1770 aa1.44□□□□□ -2.18
LSM6YDR378C TY2B-GR2P0CX64 1770 aa1.44□□□□□ -2.18
LSM6YDR378C TY2B-CP25384 1770 aa1.44□□□□□ -2.18
LSM6YDR378C TY2B-DR2Q03494 1770 aa1.44□□□□□ -2.18
LSM6YDR378C TY1B-DR1Q03855 1755 aa1.44□□□□□ -2.18
LSM6YDR378C TY2B-DR3Q07791 1770 aaKnown RBP1.44□□□□□ -2.18
LSM6YDR378C TY2B-OR1Q12113 1770 aa1.44□□□□□ -2.18
LSM6YDR378C TY2B-DR1Q12472 1770 aa1.44□□□□□ -2.18
LSM6YDR378C TY2B-OR2Q12501 1770 aa1.44□□□□□ -2.18
LSM6YDR378C YOR385WQ08909 290 aa1.44□□□□□ -2.18
LSM6YDR378C GDB1Q06625 1536 aa1.44□□□□□ -2.18
LSM6YDR378C SSN2P38931 1420 aa1.43□□□□□ -2.18
LSM6YDR378C RPC19P28000 142 aaKnown RBP1.43□□□□□ -2.18
LSM6YDR378C DNF3Q12674 1656 aa1.42□□□□□ -2.18
LSM6YDR378C CUP1-1P0CX80 61 aa1.42□□□□□ -2.18
LSM6YDR378C CUP1-2P0CX81 61 aa1.42□□□□□ -2.18
LSM6YDR378C ANB1P19211 157 aa1.42□□□□□ -2.18
LSM6YDR378C LST8P41318 303 aa1.42□□□□□ -2.18
LSM6YDR378C SPC3Q12133 184 aa1.42□□□□□ -2.18
LSM6YDR378C MRPL44P19956 98 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-HO13535 1793 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-DR5P0C2I2 1755 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-DR6P0C2I3 1755 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-LR2P0C2I5 1755 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-LR3P0C2I6 1755 aaKnown RBP1.41□□□□□ -2.18
LSM6YDR378C TY1B-PR1P0C2I9 1755 aaKnown RBP1.41□□□□□ -2.18
LSM6YDR378C TY1B-PR2P0C2J0 1756 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-PR3P0C2J1 1755 aaKnown RBP1.41□□□□□ -2.18
LSM6YDR378C TY1B-JR1P47098 1755 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-ML2Q03434 1755 aaKnown RBP1.41□□□□□ -2.18
LSM6YDR378C TY1B-ER1Q03612 1755 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-ML1Q04711 1755 aaKnown RBP1.41□□□□□ -2.18
LSM6YDR378C TY1B-GR2Q12269 1755 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-OLQ12273 1755 aa1.41□□□□□ -2.18
LSM6YDR378C TY1B-PLQ12414 1755 aaKnown RBP1.41□□□□□ -2.18
LSM6YDR378C PDR11P40550 1411 aa1.4□□□□□ -2.18
LSM6YDR378C ESP1Q03018 1630 aa1.4□□□□□ -2.18
LSM6YDR378C ULS1Q08562 1619 aa1.4□□□□□ -2.18
LSM6YDR378C TY2B-BQ12491 1770 aa1.4□□□□□ -2.19
LSM6YDR378C IQG1Q12280 1495 aa1.4□□□□□ -2.19
LSM6YDR378C YHR213WP0CI67 198 aa1.4□□□□□ -2.19
LSM6YDR378C SFT2P38166 215 aa1.4□□□□□ -2.19
LSM6YDR378C NMT1P14743 455 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 279.9 ms