RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C YOS1Q3E834 85 aa2.45□□□□□ -2.02
TRM1YDR120C CDC7P06243 507 aa2.45□□□□□ -2.02
TRM1YDR120C AHC2P25649 128 aa2.45□□□□□ -2.02
TRM1YDR120C PAU2P32612 120 aa2.45□□□□□ -2.02
TRM1YDR120C PAM16P42949 149 aa2.45□□□□□ -2.02
TRM1YDR120C YGR050CP53231 118 aa2.45□□□□□ -2.02
TRM1YDR120C DGK1Q12382 290 aa2.45□□□□□ -2.02
TRM1YDR120C YOR192C-CQ3E736 78 aa2.45□□□□□ -2.02
TRM1YDR120C YHR086W-AQ3E746 53 aa2.45□□□□□ -2.02
TRM1YDR120C AUA1P32450 94 aa2.44□□□□□ -2.02
TRM1YDR120C HYM1P32464 399 aa2.44□□□□□ -2.02
TRM1YDR120C ERV15P38312 142 aa2.44□□□□□ -2.02
TRM1YDR120C EGD2P38879 174 aaKnown RBP2.44□□□□□ -2.02
TRM1YDR120C NVJ1P38881 321 aa2.44□□□□□ -2.02
TRM1YDR120C YLR099W-AQ3E798 87 aa2.44□□□□□ -2.02
TRM1YDR120C OCH1P31755 480 aa2.43□□□□□ -2.02
TRM1YDR120C SHE2P36068 246 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
TRM1YDR120C UTP30P36144 274 aaKnown RBP2.43□□□□□ -2.02
TRM1YDR120C MRPL28P36527 147 aa2.43□□□□□ -2.02
TRM1YDR120C VMA22P38784 181 aa2.43□□□□□ -2.02
TRM1YDR120C YKE4P40544 346 aa2.43□□□□□ -2.02
TRM1YDR120C LSM7P53905 115 aaKnown RBP2.43□□□□□ -2.02
TRM1YDR120C YHP1Q04116 353 aa2.43□□□□□ -2.02
TRM1YDR120C HNT1Q04344 158 aaKnown RBP2.43□□□□□ -2.02
TRM1YDR120C POP7P38291 140 aa2.42□□□□□ -2.02
TRM1YDR120C RFC2P40348 353 aa2.42□□□□□ -2.02
TRM1YDR120C GPI14P47088 403 aaKnown RBP2.42□□□□□ -2.02
TRM1YDR120C LSM8P47093 109 aaKnown RBP2.42□□□□□ -2.02
TRM1YDR120C SOL1P50278 321 aa2.42□□□□□ -2.02
TRM1YDR120C DOC1P53068 250 aa2.42□□□□□ -2.02
TRM1YDR120C YOL118CQ08259 102 aa2.42□□□□□ -2.02
TRM1YDR120C QCR7P00128 127 aa2.42□□□□□ -2.02
TRM1YDR120C PET54P10834 293 aa2.42□□□□□ -2.02
TRM1YDR120C MPC2P38857 129 aa2.42□□□□□ -2.02
TRM1YDR120C PGD1P40356 397 aa2.42□□□□□ -2.02
TRM1YDR120C ERG25P53045 309 aa2.42□□□□□ -2.02
TRM1YDR120C RPB7P34087 171 aa2.41□□□□□ -2.02
TRM1YDR120C LSM1P47017 172 aaKnown RBP2.41□□□□□ -2.02
TRM1YDR120C ARO8P53090 500 aaKnown RBP2.41□□□□□ -2.02
TRM1YDR120C BUD25P85052 153 aa2.41□□□□□ -2.02
TRM1YDR120C YDR274CP87283 123 aa2.41□□□□□ -2.02
TRM1YDR120C YPL162CQ12042 273 aa2.41□□□□□ -2.02
TRM1YDR120C MED11Q99278 115 aa2.41□□□□□ -2.02
TRM1YDR120C ODC2Q99297 307 aa2.41□□□□□ -2.02
TRM1YDR120C MRPL38P35996 138 aaPredicted RBP2.4□□□□□ -2.02
TRM1YDR120C CIN5P40917 295 aa2.4□□□□□ -2.02
TRM1YDR120C RPL33BP41056 107 aaKnown RBP2.4□□□□□ -2.02
TRM1YDR120C MAK3Q03503 176 aa2.4□□□□□ -2.02
TRM1YDR120C TSC3Q3E790 80 aa2.4□□□□□ -2.02
TRM1YDR120C MRS4P23500 304 aa2.39□□□□□ -2.03
TRM1YDR120C YHR022CP38763 256 aa2.39□□□□□ -2.03
TRM1YDR120C YHR138CP38841 114 aaPredicted RBP2.39□□□□□ -2.03
TRM1YDR120C VMA7P39111 118 aa2.39□□□□□ -2.03
TRM1YDR120C YAE1P47118 141 aaPredicted RBP2.39□□□□□ -2.03
TRM1YDR120C DIE2P50076 525 aa2.39□□□□□ -2.03
TRM1YDR120C CYT2Q00873 224 aa2.39□□□□□ -2.03
TRM1YDR120C YNG1Q08465 219 aa2.39□□□□□ -2.03
TRM1YDR120C YHR213W-AQ8TGT4 77 aa2.39□□□□□ -2.03
TRM1YDR120C ROX3P25046 220 aa2.39□□□□□ -2.03
TRM1YDR120C ACP1P32463 125 aa2.39□□□□□ -2.03
TRM1YDR120C YKR045CP36138 183 aa2.39□□□□□ -2.03
TRM1YDR120C FMP23P38231 175 aa2.39□□□□□ -2.03
TRM1YDR120C YOL160WQ08321 113 aa2.39□□□□□ -2.03
TRM1YDR120C CMC2Q3E7A4 109 aa2.39□□□□□ -2.03
TRM1YDR120C YPR108W-AQ3E7B3 70 aa2.39□□□□□ -2.03
TRM1YDR120C YLR365WQ7LIF2 110 aa2.39□□□□□ -2.03
TRM1YDR120C YFR032C-BQ8TGU2 87 aa2.39□□□□□ -2.03
TRM1YDR120C RPL27AP0C2H6 136 aaKnown RBP2.38□□□□□ -2.03
TRM1YDR120C RPL27BP0C2H7 136 aaKnown RBP2.38□□□□□ -2.03
TRM1YDR120C DDI2P0CH63 225 aa2.38□□□□□ -2.03
TRM1YDR120C DDI3P0CH64 225 aa2.38□□□□□ -2.03
TRM1YDR120C MAG1P22134 296 aaKnown RBP2.38□□□□□ -2.03
TRM1YDR120C YGR042WP53227 271 aa2.38□□□□□ -2.03
TRM1YDR120C GIM3P53900 129 aa2.38□□□□□ -2.03
TRM1YDR120C COA4Q05809 96 aa2.38□□□□□ -2.03
TRM1YDR120C BOL1Q3E793 110 aa2.38□□□□□ -2.03
TRM1YDR120C YPT31P38555 223 aaKnown RBP2.37□□□□□ -2.03
TRM1YDR120C SVP26P38869 228 aa2.37□□□□□ -2.03
TRM1YDR120C GTT1P40582 234 aa2.37□□□□□ -2.03
TRM1YDR120C AIM25P47140 327 aa2.37□□□□□ -2.03
TRM1YDR120C HRD1Q08109 551 aa2.37□□□□□ -2.03
TRM1YDR120C IRC23Q08416 157 aa2.37□□□□□ -2.03
TRM1YDR120C URA5P13298 226 aaKnown RBP2.37□□□□□ -2.03
TRM1YDR120C BET1P22804 142 aa2.37□□□□□ -2.03
TRM1YDR120C LST8P41318 303 aa2.37□□□□□ -2.03
TRM1YDR120C YFR035CP43608 114 aa2.37□□□□□ -2.03
TRM1YDR120C MMS2P53152 137 aa2.37□□□□□ -2.03
TRM1YDR120C ATG41Q12048 136 aa2.37□□□□□ -2.03
TRM1YDR120C HUG1Q6Q5K6 68 aa2.37□□□□□ -2.03
TRM1YDR120C TAR1Q8TGM6 124 aa2.37□□□□□ -2.03
TRM1YDR120C RPB3P16370 318 aaKnown RBP2.36□□□□□ -2.03
TRM1YDR120C TRR1P29509 319 aaKnown RBP2.36□□□□□ -2.03
TRM1YDR120C SPT14P32363 452 aa2.36□□□□□ -2.03
TRM1YDR120C YJL218WP40892 196 aaKnown RBP2.36□□□□□ -2.03
TRM1YDR120C UBC12P52491 188 aa2.36□□□□□ -2.03
TRM1YDR120C COX12Q01519 83 aa2.36□□□□□ -2.03
TRM1YDR120C HTD2P38790 280 aaKnown RBP2.35□□□□□ -2.03
TRM1YDR120C DSE2P38844 325 aa2.35□□□□□ -2.03
TRM1YDR120C HHO1P53551 258 aa2.35□□□□□ -2.03
TRM1YDR120C RAD28Q12021 506 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms