RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W LDB18Q07887 179 aa2□□□□□ -2.09
SWD3YBR175W ADK1P07170 222 aaKnown RBP1.99□□□□□ -2.09
SWD3YBR175W LHP1P33399 275 aaKnown RBP1.99□□□□□ -2.09
SWD3YBR175W YPT31P38555 223 aaKnown RBP1.99□□□□□ -2.09
SWD3YBR175W RGI1P40043 161 aaPredicted RBP1.99□□□□□ -2.09
SWD3YBR175W ALB1P47019 175 aaPredicted RBP1.99□□□□□ -2.09
SWD3YBR175W ELC1Q03071 99 aa1.99□□□□□ -2.09
SWD3YBR175W AIM36Q03798 255 aa1.99□□□□□ -2.09
SWD3YBR175W RDS3Q06835 107 aaPredicted RBP1.99□□□□□ -2.09
SWD3YBR175W ATG10Q07879 167 aa1.99□□□□□ -2.09
SWD3YBR175W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
SWD3YBR175W SEC7P11075 2009 aaKnown RBP1.99□□□□□ -2.09
SWD3YBR175W RAS2P01120 322 aaKnown RBP1.98□□□□□ -2.09
SWD3YBR175W DDI2P0CH63 225 aa1.98□□□□□ -2.09
SWD3YBR175W DDI3P0CH64 225 aa1.98□□□□□ -2.09
SWD3YBR175W PEX4P29340 183 aa1.98□□□□□ -2.09
SWD3YBR175W YBL010CP32788 280 aa1.98□□□□□ -2.09
SWD3YBR175W UTP11P34247 250 aaPredicted RBP1.98□□□□□ -2.09
SWD3YBR175W PAC10P48363 199 aa1.98□□□□□ -2.09
SWD3YBR175W SAY1P53324 424 aa1.98□□□□□ -2.09
SWD3YBR175W PIR1Q03178 341 aa1.98□□□□□ -2.09
SWD3YBR175W DML1Q03652 475 aa1.98□□□□□ -2.09
SWD3YBR175W CUE4Q04201 117 aaPredicted RBP1.98□□□□□ -2.09
SWD3YBR175W TVP18Q04767 167 aa1.98□□□□□ -2.09
SWD3YBR175W RNH202Q05635 350 aa1.98□□□□□ -2.09
SWD3YBR175W CSI2Q08054 341 aa1.98□□□□□ -2.09
SWD3YBR175W UIP4Q08926 304 aa1.98□□□□□ -2.09
SWD3YBR175W RRP5Q05022 1729 aaKnown RBP1.97□□□□□ -2.09
SWD3YBR175W MDH2P22133 377 aa1.97□□□□□ -2.09
SWD3YBR175W MIG1P27705 504 aa1.97□□□□□ -2.09
SWD3YBR175W PHO88P38264 188 aaPredicted RBP1.97□□□□□ -2.09
SWD3YBR175W YBR209WP38311 105 aa1.97□□□□□ -2.09
SWD3YBR175W PHS1P40857 217 aa1.97□□□□□ -2.09
SWD3YBR175W SPG1P50088 95 aa1.97□□□□□ -2.09
SWD3YBR175W UPS3Q04006 179 aa1.97□□□□□ -2.09
SWD3YBR175W YPR195CQ06594 109 aa1.97□□□□□ -2.09
SWD3YBR175W RAD28Q12021 506 aa1.97□□□□□ -2.09
SWD3YBR175W YPR013CQ12145 317 aa1.97□□□□□ -2.09
SWD3YBR175W YOR015WQ12169 119 aa1.97□□□□□ -2.09
SWD3YBR175W URB1P34241 1764 aaKnown RBP1.97□□□□□ -2.09
SWD3YBR175W MSB2P32334 1306 aa1.96□□□□□ -2.1
SWD3YBR175W TY3B-IQ7LHG5 1498 aaKnown RBP1.96□□□□□ -2.1
SWD3YBR175W NMT1P14743 455 aa1.96□□□□□ -2.1
SWD3YBR175W YCR101CP25607 182 aa1.96□□□□□ -2.1
SWD3YBR175W ETR1P38071 380 aa1.96□□□□□ -2.1
SWD3YBR175W GAT4P40569 121 aa1.96□□□□□ -2.1
SWD3YBR175W NSE4P43124 402 aa1.96□□□□□ -2.1
SWD3YBR175W SAE3P89114 91 aa1.96□□□□□ -2.1
SWD3YBR175W TMA23Q03525 211 aa1.96□□□□□ -2.1
SWD3YBR175W UPS1Q05776 175 aa1.96□□□□□ -2.1
SWD3YBR175W VPS68Q12016 184 aa1.96□□□□□ -2.1
SWD3YBR175W ATG41Q12048 136 aa1.96□□□□□ -2.1
SWD3YBR175W FYV7Q12247 151 aa1.96□□□□□ -2.1
SWD3YBR175W SCS22Q6Q595 175 aa1.96□□□□□ -2.1
SWD3YBR175W FAS1P07149 2051 aaKnown RBP1.95□□□□□ -2.1
SWD3YBR175W INO4P13902 151 aa1.95□□□□□ -2.1
SWD3YBR175W SEC11P15367 167 aa1.95□□□□□ -2.1
SWD3YBR175W YCR050CP25630 102 aa1.95□□□□□ -2.1
SWD3YBR175W SFT2P38166 215 aa1.95□□□□□ -2.1
SWD3YBR175W SVP26P38869 228 aa1.95□□□□□ -2.1
SWD3YBR175W GAA1P39012 614 aa1.95□□□□□ -2.1
SWD3YBR175W YEL067CP39978 195 aa1.95□□□□□ -2.1
SWD3YBR175W MOB1P40484 314 aa1.95□□□□□ -2.1
SWD3YBR175W YDL241WQ07738 123 aa1.95□□□□□ -2.1
SWD3YBR175W YOR289WQ12012 251 aaPredicted RBP1.95□□□□□ -2.1
SWD3YBR175W FCF2Q12035 217 aaPredicted RBP1.95□□□□□ -2.1
SWD3YBR175W HUT1Q12520 339 aa1.95□□□□□ -2.1
SWD3YBR175W DDP1Q99321 188 aaKnown RBP1.95□□□□□ -2.1
SWD3YBR175W YER039C-AP0CD97 72 aa1.94□□□□□ -2.1
SWD3YBR175W YOR062CP36025 268 aa1.94□□□□□ -2.1
SWD3YBR175W SDH4P37298 181 aa1.94□□□□□ -2.1
SWD3YBR175W YHL018WP38744 120 aaPredicted RBP1.94□□□□□ -2.1
SWD3YBR175W MPM1P40364 252 aa1.94□□□□□ -2.1
SWD3YBR175W FLX1P40464 311 aa1.94□□□□□ -2.1
SWD3YBR175W RPS12P48589 143 aaKnown RBP1.94□□□□□ -2.1
SWD3YBR175W KNH1P50112 268 aa1.94□□□□□ -2.1
SWD3YBR175W THG1P53215 237 aaKnown RBP1.94□□□□□ -2.1
SWD3YBR175W ATP19P81451 68 aa1.94□□□□□ -2.1
SWD3YBR175W YML079WQ03629 201 aa1.94□□□□□ -2.1
SWD3YBR175W YHP1Q04116 353 aa1.94□□□□□ -2.1
SWD3YBR175W YPR174CQ06616 221 aaPredicted RBP1.94□□□□□ -2.1
SWD3YBR175W YPL225WQ08971 146 aaKnown RBP1.94□□□□□ -2.1
SWD3YBR175W EMC6Q12431 108 aa1.94□□□□□ -2.1
SWD3YBR175W ADE6P38972 1358 aaKnown RBP1.94□□□□□ -2.1
SWD3YBR175W SPS2P08459 502 aa1.93□□□□□ -2.1
SWD3YBR175W FMT1P32785 401 aa1.93□□□□□ -2.1
SWD3YBR175W YHR022CP38763 256 aa1.93□□□□□ -2.1
SWD3YBR175W RPB11P38902 120 aa1.93□□□□□ -2.1
SWD3YBR175W YAL064WP39711 94 aa1.93□□□□□ -2.1
SWD3YBR175W LSM8P47093 109 aaKnown RBP1.93□□□□□ -2.1
SWD3YBR175W ERG25P53045 309 aa1.93□□□□□ -2.1
SWD3YBR175W POP3P53833 195 aaPredicted RBP1.93□□□□□ -2.1
SWD3YBR175W DAD3P69850 94 aa1.93□□□□□ -2.1
SWD3YBR175W DAD4P69851 72 aa1.93□□□□□ -2.1
SWD3YBR175W CYT2Q00873 224 aa1.93□□□□□ -2.1
SWD3YBR175W MZM1Q03429 123 aaPredicted RBP1.93□□□□□ -2.1
SWD3YBR175W YLR042CQ07990 161 aa1.93□□□□□ -2.1
SWD3YBR175W KTI11Q3E840 82 aa1.93□□□□□ -2.1
SWD3YBR175W COX8P04039 78 aa1.92□□□□□ -2.1
SWD3YBR175W ANB1P19211 157 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms