RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIF2	YBR103W	SMT3	Q12306	101 aa	Known RBP	4.13	□□□□□ -1.75
SIF2	YBR103W	UTP23	Q12339	254 aa	Known RBP	4.13	□□□□□ -1.75
SIF2	YBR103W	JID1	Q12350	301 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	SEC16	P48415	2195 aa	Known RBP	4.13	□□□□□ -1.75
SIF2	YBR103W	ECM12	O13529	151 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	YOL162W	P0CF19	215 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	UBC5	P15732	148 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	SPO13	P23624	291 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	YCR100C	P25606	316 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	YIL169C	P40442	995 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	YJL118W	P47022	219 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	BXI1	P48558	297 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	WSC2	P53832	503 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	BUD25	P85052	153 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	YPL039W	Q03080	316 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	UPS1	Q05776	175 aa		4.12	□□□□□ -1.75
SIF2	YBR103W	VPS63	O13549	108 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	RPS22A	P0C0W1	130 aa	Known RBP	4.11	□□□□□ -1.75
SIF2	YBR103W	CTA1	P15202	515 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	KRE1	P17260	313 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	CPT1	P17898	393 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	TIM12	P32830	109 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	REC114	P32841	428 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	SHB17	P36136	271 aa	Known RBP	4.11	□□□□□ -1.75
SIF2	YBR103W	YHR180W	P38868	163 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	CAX4	P53223	239 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	ALG9	P53868	555 aa	Known RBP	4.11	□□□□□ -1.75
SIF2	YBR103W	YLR296W	Q05898	108 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	YDR029W	Q12111	104 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	YKL023C-A	Q2V2P3	75 aa		4.11	□□□□□ -1.75
SIF2	YBR103W	MSI1	P13712	422 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	MDH2	P22133	377 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	FRM2	P37261	193 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	CYB5	P40312	120 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	YFR057W	P43625	151 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	GPI2	P46961	280 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	HPA2	Q06592	156 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	IRC19	Q07843	230 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	RDL2	Q08742	149 aa	Known RBP	4.1	□□□□□ -1.75
SIF2	YBR103W	YER145C-A	A0A023PYF4	145 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	AGA2	P32781	87 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	GEP7	P53171	287 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	SCW4	P53334	386 aa	Known RBP	4.1	□□□□□ -1.75
SIF2	YBR103W	VPS71	Q03433	280 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	BET5	Q03630	159 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	SNT309	Q06091	175 aa	Predicted RBP	4.1	□□□□□ -1.75
SIF2	YBR103W	GEP3	Q08622	556 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	NCE102	Q12207	173 aa	RIP-Chip data	4.1	□□□□□ -1.75	not detected
SIF2	YBR103W	YOR343C	Q12484	108 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	ENV10	Q99382	181 aa		4.1	□□□□□ -1.75
SIF2	YBR103W	MRS4	P23500	304 aa		4.09	□□□□□ -1.76
SIF2	YBR103W	RFA3	P26755	122 aa	Known RBP	4.09	□□□□□ -1.76
SIF2	YBR103W	RPB7	P34087	171 aa		4.09	□□□□□ -1.76
SIF2	YBR103W	YKR041W	P36134	250 aa		4.09	□□□□□ -1.76
SIF2	YBR103W	MRPL39	P36533	70 aa		4.09	□□□□□ -1.76
SIF2	YBR103W	CCS1	P40202	249 aa	Known RBP	4.09	□□□□□ -1.76
SIF2	YBR103W	ALG13	P53178	202 aa		4.09	□□□□□ -1.76
SIF2	YBR103W	LPP1	Q04396	274 aa		4.09	□□□□□ -1.76
SIF2	YBR103W	ARC18	Q05933	178 aa	Known RBP	4.09	□□□□□ -1.76
SIF2	YBR103W	MCH4	Q08268	501 aa		4.09	□□□□□ -1.76
SIF2	YBR103W	FIT3	Q08907	204 aa		4.09	□□□□□ -1.76
SIF2	YBR103W	NIP7	Q08962	181 aa	Known RBP	4.09	□□□□□ -1.76
SIF2	YBR103W	POC4	Q12245	148 aa	Predicted RBP	4.09	□□□□□ -1.76
SIF2	YBR103W	YDR157W	A0A023PZE8	133 aa		4.08	□□□□□ -1.76
SIF2	YBR103W	SOD1	P00445	154 aa	Known RBP	4.08	□□□□□ -1.76
SIF2	YBR103W	YCR085W	P25650	117 aa		4.08	□□□□□ -1.76
SIF2	YBR103W	AHT1	P29589	182 aa		4.08	□□□□□ -1.76
SIF2	YBR103W	RPA12	P32529	125 aa	Known RBP	4.08	□□□□□ -1.76
SIF2	YBR103W	SAS2	P40963	338 aa		4.08	□□□□□ -1.76
SIF2	YBR103W	EGT2	P42835	1041 aa		4.08	□□□□□ -1.76
SIF2	YBR103W	API2	Q04413	109 aa		4.08	□□□□□ -1.76
SIF2	YBR103W	FCF1	Q05498	189 aa	Predicted RBP	4.08	□□□□□ -1.76
SIF2	YBR103W	YDL180W	Q12301	547 aa		4.08	□□□□□ -1.76
SIF2	YBR103W	YKL183C-A	Q3E765	70 aa		4.08	□□□□□ -1.76
SIF2	YBR103W	YAL064W-B	O13512	126 aa		4.07	□□□□□ -1.76
SIF2	YBR103W	RPB8	P20436	146 aa		4.07	□□□□□ -1.76
SIF2	YBR103W	PRS4	P38063	326 aa	Predicted RBP	4.07	□□□□□ -1.76
SIF2	YBR103W	YHL037C	P38733	133 aa		4.07	□□□□□ -1.76
SIF2	YBR103W	YAR068W	P39564	161 aa		4.07	□□□□□ -1.76
SIF2	YBR103W	YNL194C	P40169	301 aa		4.07	□□□□□ -1.76
SIF2	YBR103W	KNH1	P50112	268 aa		4.07	□□□□□ -1.76
SIF2	YBR103W	MRPL51	Q06090	140 aa	Predicted RBP	4.07	□□□□□ -1.76
SIF2	YBR103W	YFL041W-A	Q3E817	63 aa		4.07	□□□□□ -1.76
SIF2	YBR103W	YPL229W	Q99395	206 aa		4.07	□□□□□ -1.76
SIF2	YBR103W	QCR9	P22289	66 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	KTI12	P34253	313 aa	Known RBP	4.06	□□□□□ -1.76
SIF2	YBR103W	LCB3	P47013	409 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	TDA4	P47153	279 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	COF1	Q03048	143 aa	Known RBP	4.06	□□□□□ -1.76
SIF2	YBR103W	YMR320W	Q04897	101 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	RAF1	Q06891	181 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	YLR042C	Q07990	161 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	MPD1	Q12404	318 aa	Known RBP	4.06	□□□□□ -1.76
SIF2	YBR103W	HTL1	Q9URQ5	78 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	OPI3	P05375	206 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	AQY1	P0CD91	305 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	YLL053C	P0CD98	152 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SIF2	YBR103W	PAM17	P36147	197 aa		4.06	□□□□□ -1.76
SIF2	YBR103W	MTC6	P38849	526 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms