RNA–Protein interactions for RNA: YDR247W

VHS1, Transcript of Cytoplasmic serine/threonine protein kinase, yeastyeast

Gene VHS1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS1YDR247W PGU1P47180 361 aa4.46□□□□□ -1.7
VHS1YDR247W CGI121Q03705 181 aaKnown RBP4.46□□□□□ -1.7
VHS1YDR247W PRP11Q07350 266 aaPredicted RBP4.46□□□□□ -1.7
VHS1YDR247W PAU23Q07987 124 aa4.46□□□□□ -1.7
VHS1YDR247W YOL024WQ08172 172 aa4.46□□□□□ -1.7
VHS1YDR247W FIT3Q08907 204 aa4.46□□□□□ -1.7
VHS1YDR247W POC4Q12245 148 aaPredicted RBP4.46□□□□□ -1.7
VHS1YDR247W PAU17Q12370 124 aa4.46□□□□□ -1.7
VHS1YDR247W YCR024C-BQ3E7Z8 88 aa4.46□□□□□ -1.7
VHS1YDR247W CYC3P06182 269 aa4.45□□□□□ -1.7
VHS1YDR247W RNA15P25299 296 aaPredicted RBP4.45□□□□□ -1.7
VHS1YDR247W SRP21P32342 167 aa4.45□□□□□ -1.7
VHS1YDR247W YKL187CP34231 750 aa4.45□□□□□ -1.7
VHS1YDR247W MCH2P36032 473 aa4.45□□□□□ -1.7
VHS1YDR247W PAM17P36147 197 aa4.45□□□□□ -1.7
VHS1YDR247W SRP14P38985 146 aa4.45□□□□□ -1.7
VHS1YDR247W DFG10P40526 253 aa4.45□□□□□ -1.7
VHS1YDR247W YJL028WP47062 111 aa4.45□□□□□ -1.7
VHS1YDR247W XPT1P47165 209 aa4.45□□□□□ -1.7
VHS1YDR247W HRD1Q08109 551 aa4.45□□□□□ -1.7
VHS1YDR247W GEP5Q12393 293 aa4.45□□□□□ -1.7
VHS1YDR247W YIL046W-AQ3E7Z4 54 aa4.45□□□□□ -1.7
VHS1YDR247W SEC16P48415 2195 aaKnown RBP4.45□□□□□ -1.7
VHS1YDR247W SOD1P00445 154 aaKnown RBP4.44□□□□□ -1.7
VHS1YDR247W PIS1P06197 220 aaKnown RBP4.44□□□□□ -1.7
VHS1YDR247W UTR5P32630 166 aa4.44□□□□□ -1.7
VHS1YDR247W MRPS5P33759 307 aa4.44□□□□□ -1.7
VHS1YDR247W YER188WP40103 239 aa4.44□□□□□ -1.7
VHS1YDR247W PRE5P40302 234 aaKnown RBP4.44□□□□□ -1.7
VHS1YDR247W DSK2P48510 373 aa4.44□□□□□ -1.7
VHS1YDR247W YGL260WP53056 76 aa4.44□□□□□ -1.7
VHS1YDR247W YDR366CP87287 132 aa4.44□□□□□ -1.7
VHS1YDR247W SDC1Q03323 175 aa4.44□□□□□ -1.7
VHS1YDR247W ECM18Q04623 453 aa4.44□□□□□ -1.7
VHS1YDR247W GAT3Q07928 141 aa4.44□□□□□ -1.7
VHS1YDR247W YDL157CQ12082 118 aa4.44□□□□□ -1.7
VHS1YDR247W BOL1Q3E793 110 aa4.44□□□□□ -1.7
VHS1YDR247W YER078W-AQ3E7A2 54 aa4.44□□□□□ -1.7
VHS1YDR247W RPS22BQ3E7Y3 130 aaKnown RBP4.44□□□□□ -1.7
VHS1YDR247W ACC1Q00955 2233 aaKnown RBP4.44□□□□□ -1.7
VHS1YDR247W CUP2P15315 225 aa4.43□□□□□ -1.7
VHS1YDR247W ROX3P25046 220 aa4.43□□□□□ -1.7
VHS1YDR247W YPS1P32329 569 aa4.43□□□□□ -1.7
VHS1YDR247W YBR090CP38253 122 aa4.43□□□□□ -1.7
VHS1YDR247W TEM1P38987 245 aa4.43□□□□□ -1.7
VHS1YDR247W RPA43P46669 326 aa4.43□□□□□ -1.7
VHS1YDR247W LCB3P47013 409 aa4.43□□□□□ -1.7
VHS1YDR247W YJR015WP47090 510 aa4.43□□□□□ -1.7
VHS1YDR247W CPD1P53314 239 aa4.43□□□□□ -1.7
VHS1YDR247W BOR1P53838 576 aa4.43□□□□□ -1.7
VHS1YDR247W DYN2Q02647 92 aa4.43□□□□□ -1.7
VHS1YDR247W MIX14Q04341 121 aa4.43□□□□□ -1.7
VHS1YDR247W PBA1Q05778 276 aa4.43□□□□□ -1.7
VHS1YDR247W HTB1P02293 131 aaKnown RBP4.42□□□□□ -1.7
VHS1YDR247W HTB2P02294 131 aa4.42□□□□□ -1.7
VHS1YDR247W HHF1P02309 103 aaKnown RBP4.42□□□□□ -1.7
VHS1YDR247W PRE1P22141 198 aaKnown RBP4.42□□□□□ -1.7
VHS1YDR247W YHR138CP38841 114 aaPredicted RBP4.42□□□□□ -1.7
VHS1YDR247W AGE2P40529 298 aa4.42□□□□□ -1.7
VHS1YDR247W MIC27P50945 234 aa4.42□□□□□ -1.7
VHS1YDR247W YMR166CQ03829 368 aa4.42□□□□□ -1.7
VHS1YDR247W RUB1Q03919 77 aa4.42□□□□□ -1.7
VHS1YDR247W UPS1Q05776 175 aa4.42□□□□□ -1.7
VHS1YDR247W CNL1Q06333 122 aa4.42□□□□□ -1.7
VHS1YDR247W YOR376WQ08900 122 aa4.42□□□□□ -1.7
VHS1YDR247W YDL180WQ12301 547 aa4.42□□□□□ -1.7
VHS1YDR247W YPS3Q12303 508 aa4.42□□□□□ -1.7
VHS1YDR247W POL2P21951 2222 aaKnown RBP4.42□□□□□ -1.7
VHS1YDR247W RPL18AP0CX49 186 aaKnown RBP4.41□□□□□ -1.7
VHS1YDR247W RPL18BP0CX50 186 aaKnown RBP4.41□□□□□ -1.7
VHS1YDR247W QRI5P32344 111 aa4.41□□□□□ -1.7
VHS1YDR247W GSP1P32835 219 aaKnown RBP4.41□□□□□ -1.7
VHS1YDR247W GSP2P32836 220 aaKnown RBP4.41□□□□□ -1.7
VHS1YDR247W KEG1P43614 200 aa4.41□□□□□ -1.7
VHS1YDR247W THG1P53215 237 aaKnown RBP4.41□□□□□ -1.7
VHS1YDR247W YPR098CQ06089 161 aa4.41□□□□□ -1.7
VHS1YDR247W RAF1Q06891 181 aa4.41□□□□□ -1.7
VHS1YDR247W CSM4Q08955 156 aa4.41□□□□□ -1.7
VHS1YDR247W YMR316C-AI2HB70 103 aa4.4□□□□□ -1.7
VHS1YDR247W ADH2P00331 348 aaKnown RBP4.4□□□□□ -1.7
VHS1YDR247W COX2P00410 251 aa4.4□□□□□ -1.7
VHS1YDR247W SEC4P07560 215 aaKnown RBP4.4□□□□□ -1.7
VHS1YDR247W YPR170W-BP0C5R9 85 aa4.4□□□□□ -1.7
VHS1YDR247W HMRA1P0CY11 126 aa4.4□□□□□ -1.7
VHS1YDR247W AIM29P36154 155 aa4.4□□□□□ -1.7
VHS1YDR247W HAC1P41546 238 aa4.4□□□□□ -1.7
VHS1YDR247W TDA4P47153 279 aa4.4□□□□□ -1.7
VHS1YDR247W YGL230CP53074 147 aa4.4□□□□□ -1.7
VHS1YDR247W HSK3P69852 69 aa4.4□□□□□ -1.7
VHS1YDR247W UPS3Q04006 179 aa4.4□□□□□ -1.7
VHS1YDR247W LPP1Q04396 274 aa4.4□□□□□ -1.7
VHS1YDR247W RRG8Q06109 277 aa4.4□□□□□ -1.7
VHS1YDR247W YPL162CQ12042 273 aa4.4□□□□□ -1.7
VHS1YDR247W YGL258W-AQ3E740 77 aa4.4□□□□□ -1.7
VHS1YDR247W TAO3P40468 2376 aa4.4□□□□□ -1.71
VHS1YDR247W SEC11P15367 167 aa4.4□□□□□ -1.71
VHS1YDR247W YMR31P19955 123 aa4.4□□□□□ -1.71
VHS1YDR247W RAD23P32628 398 aaKnown RBP4.4□□□□□ -1.71
VHS1YDR247W RPF1P38805 295 aaKnown RBP4.4□□□□□ -1.71
VHS1YDR247W EGT2P42835 1041 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms