RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W YGL262WP53054 175 aa1.57□□□□□ -2.16
SIR4YDR227W JAC1P53193 184 aa1.57□□□□□ -2.16
SIR4YDR227W RAF1Q06891 181 aa1.57□□□□□ -2.16
SIR4YDR227W DGK1Q12382 290 aa1.57□□□□□ -2.16
SIR4YDR227W YCR007CP25354 239 aa1.57□□□□□ -2.16
SIR4YDR227W FUN26P31381 517 aa1.57□□□□□ -2.16
SIR4YDR227W RCN1P36054 211 aa1.57□□□□□ -2.16
SIR4YDR227W YPL073CP40323 161 aa1.57□□□□□ -2.16
SIR4YDR227W YJL218WP40892 196 aaKnown RBP1.57□□□□□ -2.16
SIR4YDR227W GEP7P53171 287 aa1.57□□□□□ -2.16
SIR4YDR227W CRH1P53301 507 aa1.57□□□□□ -2.16
SIR4YDR227W PRR2Q12310 699 aa1.57□□□□□ -2.16
SIR4YDR227W TPI1P00942 248 aaKnown RBP1.56□□□□□ -2.16
SIR4YDR227W AHC2P25649 128 aa1.56□□□□□ -2.16
SIR4YDR227W GNA1P43577 159 aaPredicted RBP1.56□□□□□ -2.16
SIR4YDR227W LSM8P47093 109 aaKnown RBP1.56□□□□□ -2.16
SIR4YDR227W OST3P48439 350 aa1.56□□□□□ -2.16
SIR4YDR227W GAL83Q04739 417 aa1.56□□□□□ -2.16
SIR4YDR227W TIR4Q12218 487 aaPredicted RBP1.56□□□□□ -2.16
SIR4YDR227W RDL1Q12305 139 aaKnown RBP1.56□□□□□ -2.16
SIR4YDR227W RPS18AP0CX55 146 aaKnown RBP1.56□□□□□ -2.16
SIR4YDR227W RPS18BP0CX56 146 aaPredicted RBP1.56□□□□□ -2.16
SIR4YDR227W UBC4P15731 148 aa1.56□□□□□ -2.16
SIR4YDR227W YPT10P38146 199 aa1.56□□□□□ -2.16
SIR4YDR227W RPS29AP41057 56 aaKnown RBP1.56□□□□□ -2.16
SIR4YDR227W VPS71Q03433 280 aa1.56□□□□□ -2.16
SIR4YDR227W KEI1Q06346 221 aa1.56□□□□□ -2.16
SIR4YDR227W CMC4Q3E7A9 73 aa1.56□□□□□ -2.16
SIR4YDR227W YKL187CP34231 750 aa1.56□□□□□ -2.16
SIR4YDR227W POP8P38208 133 aa1.56□□□□□ -2.16
SIR4YDR227W HTD2P38790 280 aaKnown RBP1.56□□□□□ -2.16
SIR4YDR227W MPC2P38857 129 aa1.56□□□□□ -2.16
SIR4YDR227W SVP26P38869 228 aa1.56□□□□□ -2.16
SIR4YDR227W EDC2P40023 145 aaPredicted RBP1.56□□□□□ -2.16
SIR4YDR227W YNL200CP40165 246 aaKnown RBP1.56□□□□□ -2.16
SIR4YDR227W FIP1P45976 327 aa1.56□□□□□ -2.16
SIR4YDR227W SMX3P54999 86 aaPredicted RBP1.56□□□□□ -2.16
SIR4YDR227W MIX14Q04341 121 aa1.56□□□□□ -2.16
SIR4YDR227W IRC25Q07951 179 aa1.56□□□□□ -2.16
SIR4YDR227W SME1Q12330 94 aaPredicted RBP1.56□□□□□ -2.16
SIR4YDR227W SAS5Q99314 248 aa1.56□□□□□ -2.16
SIR4YDR227W RAD6P06104 172 aa1.56□□□□□ -2.16
SIR4YDR227W LDS1P31379 325 aa1.56□□□□□ -2.16
SIR4YDR227W YEL045CP32616 141 aa1.56□□□□□ -2.16
SIR4YDR227W HSK3P69852 69 aa1.56□□□□□ -2.16
SIR4YDR227W YDR274CP87283 123 aa1.56□□□□□ -2.16
SIR4YDR227W CSI2Q08054 341 aa1.56□□□□□ -2.16
SIR4YDR227W YOR385WQ08909 290 aa1.56□□□□□ -2.16
SIR4YDR227W YJL028WP47062 111 aa1.55□□□□□ -2.16
SIR4YDR227W SPG1P50088 95 aa1.55□□□□□ -2.16
SIR4YDR227W YGR050CP53231 118 aa1.55□□□□□ -2.16
SIR4YDR227W CLD1P53264 445 aa1.55□□□□□ -2.16
SIR4YDR227W YNR064CP53750 290 aa1.55□□□□□ -2.16
SIR4YDR227W NIP7Q08962 181 aaKnown RBP1.55□□□□□ -2.16
SIR4YDR227W FYV7Q12247 151 aa1.55□□□□□ -2.16
SIR4YDR227W ADH3P07246 375 aaKnown RBP1.55□□□□□ -2.16
SIR4YDR227W YSF3P0C074 85 aaPredicted RBP1.55□□□□□ -2.16
SIR4YDR227W RPB5P20434 215 aa1.55□□□□□ -2.16
SIR4YDR227W RNP1P32385 249 aa1.55□□□□□ -2.16
SIR4YDR227W IRC18P47056 224 aa1.55□□□□□ -2.16
SIR4YDR227W TIS11P47977 285 aa1.55□□□□□ -2.16
SIR4YDR227W ATO3Q12359 275 aa1.55□□□□□ -2.16
SIR4YDR227W YCR075W-AQ3E830 75 aa1.55□□□□□ -2.16
SIR4YDR227W YCL001W-BQ96VH2 84 aa1.55□□□□□ -2.16
SIR4YDR227W DDP1Q99321 188 aaKnown RBP1.55□□□□□ -2.16
SIR4YDR227W TIM9O74700 87 aa1.55□□□□□ -2.16
SIR4YDR227W LSM7P53905 115 aaKnown RBP1.55□□□□□ -2.16
SIR4YDR227W GRH1Q04410 372 aaKnown RBP1.55□□□□□ -2.16
SIR4YDR227W IRC23Q08416 157 aa1.55□□□□□ -2.16
SIR4YDR227W YDL085C-AQ3E7B7 68 aaKnown RBP1.55□□□□□ -2.16
SIR4YDR227W SHB17P36136 271 aaKnown RBP1.54□□□□□ -2.16
SIR4YDR227W YHL005CP38752 130 aa1.54□□□□□ -2.16
SIR4YDR227W REE1P40893 198 aa1.54□□□□□ -2.16
SIR4YDR227W OSH6Q02201 448 aa1.54□□□□□ -2.16
SIR4YDR227W YMR181CQ03231 154 aa1.54□□□□□ -2.16
SIR4YDR227W YGK3Q12222 375 aaPredicted RBP1.54□□□□□ -2.16
SIR4YDR227W YAL064W-BO13512 126 aa1.54□□□□□ -2.16
SIR4YDR227W ASK1P35734 292 aa1.54□□□□□ -2.16
SIR4YDR227W PAM17P36147 197 aa1.54□□□□□ -2.16
SIR4YDR227W YIL152WP40455 235 aa1.54□□□□□ -2.16
SIR4YDR227W LPP1Q04396 274 aa1.54□□□□□ -2.16
SIR4YDR227W YPL225WQ08971 146 aaKnown RBP1.54□□□□□ -2.16
SIR4YDR227W ATP14Q12349 124 aa1.54□□□□□ -2.16
SIR4YDR227W MHF2Q3E829 80 aa1.54□□□□□ -2.16
SIR4YDR227W KRE1P17260 313 aa1.54□□□□□ -2.16
SIR4YDR227W ERG2P32352 222 aa1.54□□□□□ -2.16
SIR4YDR227W MRP49P32388 137 aa1.54□□□□□ -2.16
SIR4YDR227W GPX1P36014 167 aa1.54□□□□□ -2.16
SIR4YDR227W ERV14P53173 138 aa1.54□□□□□ -2.16
SIR4YDR227W SCW4P53334 386 aaKnown RBP1.54□□□□□ -2.16
SIR4YDR227W CNL1Q06333 122 aa1.54□□□□□ -2.16
SIR4YDR227W LOA1Q06508 300 aa1.54□□□□□ -2.16
SIR4YDR227W YPL229WQ99395 206 aa1.54□□□□□ -2.16
SIR4YDR227W FMP27Q06179 2628 aa1.53□□□□□ -2.16
SIR4YDR227W NOP1P15646 327 aaKnown RBP1.53□□□□□ -2.16
SIR4YDR227W PRE1P22141 198 aaKnown RBP1.53□□□□□ -2.16
SIR4YDR227W AHT1P29589 182 aa1.53□□□□□ -2.16
SIR4YDR227W XPT1P47165 209 aa1.53□□□□□ -2.16
SIR4YDR227W MPC1P53157 130 aaKnown RBP1.53□□□□□ -2.16
SIR4YDR227W MEC1P38111 2368 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms