RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W SOR2Q07786 357 aa3.44□□□□□ -1.86
HSP42YDR171W HRD1Q08109 551 aa3.44□□□□□ -1.86
HSP42YDR171W TIM18Q08749 192 aa3.44□□□□□ -1.86
HSP42YDR171W YLR050CQ12155 161 aaKnown RBP3.44□□□□□ -1.86
HSP42YDR171W YCR024C-BQ3E7Z8 88 aa3.44□□□□□ -1.86
HSP42YDR171W HUG1Q6Q5K6 68 aa3.44□□□□□ -1.86
HSP42YDR171W SRP14P38985 146 aa3.43□□□□□ -1.86
HSP42YDR171W LYS1P38998 373 aaRIP-Chip data3.43□□□□□ -1.86not detected
HSP42YDR171W MOB1P40484 314 aa3.43□□□□□ -1.86
HSP42YDR171W DFG10P40526 253 aa3.43□□□□□ -1.86
HSP42YDR171W SPG5P42933 373 aa3.43□□□□□ -1.86
HSP42YDR171W WWM1P43582 211 aaKnown RBP3.43□□□□□ -1.86
HSP42YDR171W NCA3P46955 337 aa3.43□□□□□ -1.86
HSP42YDR171W YNR048WP53740 393 aa3.43□□□□□ -1.86
HSP42YDR171W LPP1Q04396 274 aa3.43□□□□□ -1.86
HSP42YDR171W YPR147CQ06522 304 aaKnown RBP3.43□□□□□ -1.86
HSP42YDR171W LDS2Q08218 356 aa3.43□□□□□ -1.86
HSP42YDR171W FAB1P34756 2278 aa3.43□□□□□ -1.86
HSP42YDR171W RPL12AP0CX53 165 aaKnown RBP3.42□□□□□ -1.86
HSP42YDR171W RPL12BP0CX54 165 aa3.42□□□□□ -1.86
HSP42YDR171W SPT15P13393 240 aaKnown RBP3.42□□□□□ -1.86
HSP42YDR171W MSI1P13712 422 aa3.42□□□□□ -1.86
HSP42YDR171W RPL30P14120 105 aaKnown RBP3.42□□□□□ -1.86
HSP42YDR171W FPR1P20081 114 aaKnown RBP3.42□□□□□ -1.86
HSP42YDR171W QRI5P32344 111 aa3.42□□□□□ -1.86
HSP42YDR171W YKR070WP36151 352 aaKnown RBP3.42□□□□□ -1.86
HSP42YDR171W ECM33P38248 429 aaKnown RBP3.42□□□□□ -1.86
HSP42YDR171W CCS1P40202 249 aaKnown RBP3.42□□□□□ -1.86
HSP42YDR171W OSW5P40219 148 aa3.42□□□□□ -1.86
HSP42YDR171W YPS6P40583 537 aa3.42□□□□□ -1.86
HSP42YDR171W CUP9P41817 306 aa3.42□□□□□ -1.86
HSP42YDR171W YPI1P43587 155 aa3.42□□□□□ -1.86
HSP42YDR171W YIP5P53108 310 aa3.42□□□□□ -1.86
HSP42YDR171W YGR050CP53231 118 aa3.42□□□□□ -1.86
HSP42YDR171W CPD1P53314 239 aa3.42□□□□□ -1.86
HSP42YDR171W CAB4P53332 305 aa3.42□□□□□ -1.86
HSP42YDR171W YLR460CP54007 376 aa3.42□□□□□ -1.86
HSP42YDR171W YMR007WQ03675 126 aa3.42□□□□□ -1.86
HSP42YDR171W TSA2Q04120 196 aa3.42□□□□□ -1.86
HSP42YDR171W PBA1Q05778 276 aa3.42□□□□□ -1.86
HSP42YDR171W SEI1Q06058 285 aa3.42□□□□□ -1.86
HSP42YDR171W ATO3Q12359 275 aa3.42□□□□□ -1.86
HSP42YDR171W YIL102C-AQ2V2P5 75 aa3.42□□□□□ -1.86
HSP42YDR171W NOP1P15646 327 aaKnown RBP3.41□□□□□ -1.86
HSP42YDR171W FCY2P17064 533 aa3.41□□□□□ -1.86
HSP42YDR171W HYP2P23301 157 aaKnown RBP3.41□□□□□ -1.86
HSP42YDR171W PAM17P36147 197 aa3.41□□□□□ -1.86
HSP42YDR171W PRS4P38063 326 aaPredicted RBP3.41□□□□□ -1.86
HSP42YDR171W DER1P38307 211 aa3.41□□□□□ -1.86
HSP42YDR171W SEC72P39742 193 aaKnown RBP3.41□□□□□ -1.86
HSP42YDR171W YNL198CP40166 100 aa3.41□□□□□ -1.86
HSP42YDR171W YJR015WP47090 510 aa3.41□□□□□ -1.86
HSP42YDR171W ARP3P47117 449 aaKnown RBP3.41□□□□□ -1.86
HSP42YDR171W ELC1Q03071 99 aa3.41□□□□□ -1.86
HSP42YDR171W YPR174CQ06616 221 aaPredicted RBP3.41□□□□□ -1.86
HSP42YDR171W YOR186WQ08560 144 aa3.41□□□□□ -1.86
HSP42YDR171W YOR292CQ08743 309 aa3.41□□□□□ -1.86
HSP42YDR171W USB1Q12208 290 aaKnown RBP3.41□□□□□ -1.86
HSP42YDR171W CUP2P15315 225 aa3.4□□□□□ -1.87
HSP42YDR171W ZRT1P32804 376 aa3.4□□□□□ -1.87
HSP42YDR171W YOX1P34161 385 aa3.4□□□□□ -1.87
HSP42YDR171W SRX1P36077 127 aa3.4□□□□□ -1.87
HSP42YDR171W SNU13P39990 126 aaKnown RBP3.4□□□□□ -1.87
HSP42YDR171W YNL208WP40159 199 aaKnown RBP3.4□□□□□ -1.87
HSP42YDR171W YFR054CP43622 192 aa3.4□□□□□ -1.87
HSP42YDR171W YAR1P46683 200 aa3.4□□□□□ -1.87
HSP42YDR171W TDA4P47153 279 aa3.4□□□□□ -1.87
HSP42YDR171W AQR1P53943 586 aa3.4□□□□□ -1.87
HSP42YDR171W ATP19P81451 68 aa3.4□□□□□ -1.87
HSP42YDR171W VPS71Q03433 280 aa3.4□□□□□ -1.87
HSP42YDR171W BET5Q03630 159 aa3.4□□□□□ -1.87
HSP42YDR171W NIP7Q08962 181 aaKnown RBP3.4□□□□□ -1.87
HSP42YDR171W YPS3Q12303 508 aa3.4□□□□□ -1.87
HSP42YDR171W SEN1Q00416 2231 aaKnown RBP3.39□□□□□ -1.87
HSP42YDR171W ADH1P00330 348 aaKnown RBP3.39□□□□□ -1.87
HSP42YDR171W HEM4P06174 275 aa3.39□□□□□ -1.87
HSP42YDR171W YSF3P0C074 85 aaPredicted RBP3.39□□□□□ -1.87
HSP42YDR171W SWD3P38123 315 aa3.39□□□□□ -1.87
HSP42YDR171W YHR138CP38841 114 aaPredicted RBP3.39□□□□□ -1.87
HSP42YDR171W MTC6P38849 526 aa3.39□□□□□ -1.87
HSP42YDR171W YIL163CP40448 117 aa3.39□□□□□ -1.87
HSP42YDR171W EOS1P53938 366 aa3.39□□□□□ -1.87
HSP42YDR171W DPP1Q05521 289 aa3.39□□□□□ -1.87
HSP42YDR171W YRA1Q12159 226 aaKnown RBP3.39□□□□□ -1.87
HSP42YDR171W GEP5Q12393 293 aa3.39□□□□□ -1.87
HSP42YDR171W YKL023C-AQ2V2P3 75 aa3.39□□□□□ -1.87
HSP42YDR171W YHR214C-EQ8TGK0 99 aa3.39□□□□□ -1.87
HSP42YDR171W YAL064W-BO13512 126 aa3.38□□□□□ -1.87
HSP42YDR171W YOR304C-AO14468 76 aa3.38□□□□□ -1.87
HSP42YDR171W HHF1P02309 103 aaKnown RBP3.38□□□□□ -1.87
HSP42YDR171W CYC3P06182 269 aa3.38□□□□□ -1.87
HSP42YDR171W MRS1P07266 363 aa3.38□□□□□ -1.87
HSP42YDR171W ARF1P11076 181 aaKnown RBP3.38□□□□□ -1.87
HSP42YDR171W DOG2P38773 246 aa3.38□□□□□ -1.87
HSP42YDR171W YHR173CP38864 112 aa3.38□□□□□ -1.87
HSP42YDR171W YAR068WP39564 161 aa3.38□□□□□ -1.87
HSP42YDR171W DSK2P48510 373 aa3.38□□□□□ -1.87
HSP42YDR171W BRP1P53194 125 aa3.38□□□□□ -1.87
HSP42YDR171W POP3P53833 195 aaPredicted RBP3.38□□□□□ -1.87
HSP42YDR171W DIA1P54005 336 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms