RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W SBH2P52871 88 aa2.95□□□□□ -1.94
MSD1YPL104W TIM21P53220 239 aa2.95□□□□□ -1.94
MSD1YPL104W SSU72P53538 206 aaPredicted RBP2.95□□□□□ -1.94
MSD1YPL104W PAU10Q03050 120 aa2.95□□□□□ -1.94
MSD1YPL104W PAU20Q08322 120 aa2.95□□□□□ -1.94
MSD1YPL104W ATP16Q12165 160 aa2.95□□□□□ -1.94
MSD1YPL104W RAX2Q12465 1220 aa2.95□□□□□ -1.94
MSD1YPL104W PAU9Q3E770 120 aa2.95□□□□□ -1.94
MSD1YPL104W HTB1P02293 131 aaKnown RBP2.94□□□□□ -1.94
MSD1YPL104W NOP1P15646 327 aaKnown RBP2.94□□□□□ -1.94
MSD1YPL104W YBL059WP34224 193 aa2.94□□□□□ -1.94
MSD1YPL104W ATG8P38182 117 aaRIP-Chip data2.94□□□□□ -1.94not detected
MSD1YPL104W RTS2P40962 232 aa2.94□□□□□ -1.94
MSD1YPL104W YGL114WP53134 725 aa2.94□□□□□ -1.94
MSD1YPL104W CRH1P53301 507 aa2.94□□□□□ -1.94
MSD1YPL104W YMR007WQ03675 126 aa2.94□□□□□ -1.94
MSD1YPL104W AVO2Q04749 426 aa2.94□□□□□ -1.94
MSD1YPL104W CTR3Q06686 241 aa2.94□□□□□ -1.94
MSD1YPL104W TMC1Q08422 150 aaPredicted RBP2.94□□□□□ -1.94
MSD1YPL104W YPR145C-AQ2V2P0 78 aa2.94□□□□□ -1.94
MSD1YPL104W ILV5P06168 395 aaKnown RBP2.94□□□□□ -1.94
MSD1YPL104W ADH3P07246 375 aaKnown RBP2.94□□□□□ -1.94
MSD1YPL104W AQY1P0CD91 305 aa2.94□□□□□ -1.94
MSD1YPL104W POP5P28005 173 aa2.94□□□□□ -1.94
MSD1YPL104W PHS1P40857 217 aa2.94□□□□□ -1.94
MSD1YPL104W VMA21P41806 77 aa2.94□□□□□ -1.94
MSD1YPL104W YJR015WP47090 510 aa2.94□□□□□ -1.94
MSD1YPL104W BOR1P53838 576 aa2.94□□□□□ -1.94
MSD1YPL104W ARR2Q06597 130 aa2.94□□□□□ -1.94
MSD1YPL104W MRS3P10566 314 aa2.93□□□□□ -1.94
MSD1YPL104W BGL2P15703 313 aaKnown RBP2.93□□□□□ -1.94
MSD1YPL104W ALK2P32789 676 aaPredicted RBP2.93□□□□□ -1.94
MSD1YPL104W MIA40P36046 403 aa2.93□□□□□ -1.94
MSD1YPL104W MRPS9P38120 278 aa2.93□□□□□ -1.94
MSD1YPL104W DER1P38307 211 aa2.93□□□□□ -1.94
MSD1YPL104W YHL044WP38727 235 aa2.93□□□□□ -1.94
MSD1YPL104W GTT1P40582 234 aa2.93□□□□□ -1.94
MSD1YPL104W NSE4P43124 402 aa2.93□□□□□ -1.94
MSD1YPL104W NCA3P46955 337 aa2.93□□□□□ -1.94
MSD1YPL104W BNS1P50084 137 aa2.93□□□□□ -1.94
MSD1YPL104W MIC27P50945 234 aa2.93□□□□□ -1.94
MSD1YPL104W YIP1P53039 248 aa2.93□□□□□ -1.94
MSD1YPL104W STD1Q02794 444 aa2.93□□□□□ -1.94
MSD1YPL104W MIX17Q03667 156 aa2.93□□□□□ -1.94
MSD1YPL104W YHP1Q04116 353 aa2.93□□□□□ -1.94
MSD1YPL104W SHH3Q04487 196 aa2.93□□□□□ -1.94
MSD1YPL104W SPO24Q3E752 67 aa2.93□□□□□ -1.94
MSD1YPL104W BPH1P25356 2167 aa2.93□□□□□ -1.94
MSD1YPL104W RPL43AP0CX25 92 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W RPL43BP0CX26 92 aa2.92□□□□□ -1.94
MSD1YPL104W RPB3P16370 318 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W TOM40P23644 387 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W SDH4P37298 181 aa2.92□□□□□ -1.94
MSD1YPL104W TRS20P38334 175 aa2.92□□□□□ -1.94
MSD1YPL104W PAU15P40585 124 aa2.92□□□□□ -1.94
MSD1YPL104W LST8P41318 303 aa2.92□□□□□ -1.94
MSD1YPL104W LOC1P43586 204 aaPredicted RBP2.92□□□□□ -1.94
MSD1YPL104W ATC1Q04005 294 aa2.92□□□□□ -1.94
MSD1YPL104W POS5Q06892 414 aa2.92□□□□□ -1.94
MSD1YPL104W NDE2Q07500 545 aa2.92□□□□□ -1.94
MSD1YPL104W CSI2Q08054 341 aa2.92□□□□□ -1.94
MSD1YPL104W RAD28Q12021 506 aa2.92□□□□□ -1.94
MSD1YPL104W YLR118CQ12354 227 aa2.92□□□□□ -1.94
MSD1YPL104W PAA1Q12447 191 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W PIS1P06197 220 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W RPS22AP0C0W1 130 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W CUP1-1P0CX80 61 aa2.92□□□□□ -1.94
MSD1YPL104W CUP1-2P0CX81 61 aa2.92□□□□□ -1.94
MSD1YPL104W FPR2P32472 135 aa2.92□□□□□ -1.94
MSD1YPL104W RAD23P32628 398 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W NTF2P33331 125 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W YBL071CP38185 102 aa2.92□□□□□ -1.94
MSD1YPL104W YAR068WP39564 161 aa2.92□□□□□ -1.94
MSD1YPL104W YIL012WP40551 113 aa2.92□□□□□ -1.94
MSD1YPL104W SAS2P40963 338 aa2.92□□□□□ -1.94
MSD1YPL104W TAX4P47030 604 aa2.92□□□□□ -1.94
MSD1YPL104W DAN1P47178 298 aa2.92□□□□□ -1.94
MSD1YPL104W MGA1P53050 456 aa2.92□□□□□ -1.94
MSD1YPL104W YGR026WP53217 278 aa2.92□□□□□ -1.94
MSD1YPL104W ADH6Q04894 360 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W MSC3Q05812 728 aa2.92□□□□□ -1.94
MSD1YPL104W RDL1Q12305 139 aaKnown RBP2.92□□□□□ -1.94
MSD1YPL104W YMR316C-AI2HB70 103 aa2.91□□□□□ -1.94
MSD1YPL104W SOD1P00445 154 aaKnown RBP2.91□□□□□ -1.94
MSD1YPL104W YIR020CP40575 100 aa2.91□□□□□ -1.94
MSD1YPL104W YNL234WP53857 426 aa2.91□□□□□ -1.94
MSD1YPL104W LOA1Q06508 300 aa2.91□□□□□ -1.94
MSD1YPL104W ERV2Q12284 196 aa2.91□□□□□ -1.94
MSD1YPL104W JID1Q12350 301 aa2.91□□□□□ -1.94
MSD1YPL104W ATO3Q12359 275 aa2.91□□□□□ -1.94
MSD1YPL104W SNU23Q12368 194 aaPredicted RBP2.91□□□□□ -1.94
MSD1YPL104W MRPL23Q12487 163 aaPredicted RBP2.91□□□□□ -1.94
MSD1YPL104W CDC7P06243 507 aa2.91□□□□□ -1.94
MSD1YPL104W PET494P07390 489 aaPredicted RBP2.91□□□□□ -1.94
MSD1YPL104W RPS2P25443 254 aaKnown RBP2.91□□□□□ -1.94
MSD1YPL104W HMX1P32339 317 aa2.91□□□□□ -1.94
MSD1YPL104W YPT31P38555 223 aaKnown RBP2.91□□□□□ -1.94
MSD1YPL104W HSP10P38910 106 aa2.91□□□□□ -1.94
MSD1YPL104W BDH1P39714 382 aa2.91□□□□□ -1.94
MSD1YPL104W DSK2P48510 373 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms