RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C VPS63O13549 108 aa3.68□□□□□ -1.82
NUP42YDR192C YMR31P19955 123 aa3.68□□□□□ -1.82
NUP42YDR192C YOX1P34161 385 aa3.68□□□□□ -1.82
NUP42YDR192C YJR012CP47087 207 aa3.68□□□□□ -1.82
NUP42YDR192C HAM1P47119 197 aaKnown RBP3.68□□□□□ -1.82
NUP42YDR192C CGR1P53188 120 aa3.68□□□□□ -1.82
NUP42YDR192C APJ1P53940 528 aa3.68□□□□□ -1.82
NUP42YDR192C LPP1Q04396 274 aa3.68□□□□□ -1.82
NUP42YDR192C YPD1Q07688 167 aa3.68□□□□□ -1.82
NUP42YDR192C BLM10P43583 2143 aa3.67□□□□□ -1.82
NUP42YDR192C YDR157WA0A023PZE8 133 aa3.67□□□□□ -1.82
NUP42YDR192C EMP24P32803 203 aaKnown RBP3.67□□□□□ -1.82
NUP42YDR192C IKI1P38874 309 aa3.67□□□□□ -1.82
NUP42YDR192C YER121WP40076 114 aa3.67□□□□□ -1.82
NUP42YDR192C POG1P40473 351 aa3.67□□□□□ -1.82
NUP42YDR192C SMD3P43321 101 aaKnown RBP3.67□□□□□ -1.82
NUP42YDR192C SBH2P52871 88 aa3.67□□□□□ -1.82
NUP42YDR192C GEP7P53171 287 aa3.67□□□□□ -1.82
NUP42YDR192C SSU72P53538 206 aaPredicted RBP3.67□□□□□ -1.82
NUP42YDR192C PDR17P53844 350 aa3.67□□□□□ -1.82
NUP42YDR192C YMR279CQ03263 540 aa3.67□□□□□ -1.82
NUP42YDR192C RRT7Q07829 113 aa3.67□□□□□ -1.82
NUP42YDR192C SDO1Q07953 250 aaKnown RBP3.67□□□□□ -1.82
NUP42YDR192C SEC22P22214 214 aa3.66□□□□□ -1.82
NUP42YDR192C PCL1P24867 279 aa3.66□□□□□ -1.82
NUP42YDR192C RMD6P39975 231 aa3.66□□□□□ -1.82
NUP42YDR192C YJR111CP47148 283 aaKnown RBP3.66□□□□□ -1.82
NUP42YDR192C SNN1P48232 102 aa3.66□□□□□ -1.82
NUP42YDR192C TMA23Q03525 211 aa3.66□□□□□ -1.82
NUP42YDR192C YGL258W-AQ3E740 77 aa3.66□□□□□ -1.82
NUP42YDR192C HUG1Q6Q5K6 68 aa3.66□□□□□ -1.82
NUP42YDR192C TDH1P00360 332 aaKnown RBP3.65□□□□□ -1.83
NUP42YDR192C RPL9AP05738 191 aaKnown RBP3.65□□□□□ -1.83
NUP42YDR192C SEC59P20048 519 aa3.65□□□□□ -1.83
NUP42YDR192C ROX3P25046 220 aa3.65□□□□□ -1.83
NUP42YDR192C YCL042WP25572 119 aa3.65□□□□□ -1.83
NUP42YDR192C ERG2P32352 222 aa3.65□□□□□ -1.83
NUP42YDR192C FPR2P32472 135 aa3.65□□□□□ -1.83
NUP42YDR192C UPS2P35200 230 aa3.65□□□□□ -1.83
NUP42YDR192C CBT1P36038 271 aaPredicted RBP3.65□□□□□ -1.83
NUP42YDR192C YKL162CP36052 402 aa3.65□□□□□ -1.83
NUP42YDR192C GPI18P38211 433 aa3.65□□□□□ -1.83
NUP42YDR192C FIG1P38224 298 aa3.65□□□□□ -1.83
NUP42YDR192C RPL9BP51401 191 aaKnown RBP3.65□□□□□ -1.83
NUP42YDR192C YNR064CP53750 290 aa3.65□□□□□ -1.83
NUP42YDR192C FMP41P53889 259 aaKnown RBP3.65□□□□□ -1.83
NUP42YDR192C TMC1Q08422 150 aaPredicted RBP3.65□□□□□ -1.83
NUP42YDR192C RFM1Q12192 310 aa3.65□□□□□ -1.83
NUP42YDR192C YPS3Q12303 508 aa3.65□□□□□ -1.83
NUP42YDR192C MPD1Q12404 318 aaKnown RBP3.65□□□□□ -1.83
NUP42YDR192C BGL2P15703 313 aaKnown RBP3.64□□□□□ -1.83
NUP42YDR192C PHO85P17157 305 aa3.64□□□□□ -1.83
NUP42YDR192C QCR9P22289 66 aa3.64□□□□□ -1.83
NUP42YDR192C ATG15P25641 520 aa3.64□□□□□ -1.83
NUP42YDR192C YGP1P38616 354 aaKnown RBP3.64□□□□□ -1.83
NUP42YDR192C RFC2P40348 353 aa3.64□□□□□ -1.83
NUP42YDR192C PGD1P40356 397 aa3.64□□□□□ -1.83
NUP42YDR192C IGD1P43598 195 aa3.64□□□□□ -1.83
NUP42YDR192C GON7P46984 123 aa3.64□□□□□ -1.83
NUP42YDR192C YJR056CP47115 236 aa3.64□□□□□ -1.83
NUP42YDR192C RIB4P50861 169 aaPredicted RBP3.64□□□□□ -1.83
NUP42YDR192C RPL21AQ02753 160 aaKnown RBP3.64□□□□□ -1.83
NUP42YDR192C YMR082CQ04276 118 aa3.64□□□□□ -1.83
NUP42YDR192C YPL264CQ08980 353 aa3.64□□□□□ -1.83
NUP42YDR192C ATP16Q12165 160 aa3.64□□□□□ -1.83
NUP42YDR192C RPL21BQ12672 160 aaKnown RBP3.64□□□□□ -1.83
NUP42YDR192C YOS1Q3E834 85 aa3.64□□□□□ -1.83
NUP42YDR192C CDC7P06243 507 aa3.63□□□□□ -1.83
NUP42YDR192C ADH3P07246 375 aaKnown RBP3.63□□□□□ -1.83
NUP42YDR192C IES6P32617 166 aa3.63□□□□□ -1.83
NUP42YDR192C RAD23P32628 398 aaKnown RBP3.63□□□□□ -1.83
NUP42YDR192C SHB17P36136 271 aaKnown RBP3.63□□□□□ -1.83
NUP42YDR192C TRS20P38334 175 aa3.63□□□□□ -1.83
NUP42YDR192C MOG1P47123 218 aa3.63□□□□□ -1.83
NUP42YDR192C MCM22P47167 239 aa3.63□□□□□ -1.83
NUP42YDR192C HCH1P53834 153 aa3.63□□□□□ -1.83
NUP42YDR192C GIS2P53849 153 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
NUP42YDR192C HAL1Q01766 294 aa3.63□□□□□ -1.83
NUP42YDR192C RAD28Q12021 506 aa3.63□□□□□ -1.83
NUP42YDR192C BOL1Q3E793 110 aa3.63□□□□□ -1.83
NUP42YDR192C PCC1Q3E833 88 aa3.63□□□□□ -1.83
NUP42YDR192C YPS1P32329 569 aa3.62□□□□□ -1.83
NUP42YDR192C SPS18P32572 300 aa3.62□□□□□ -1.83
NUP42YDR192C YKL075CP36083 450 aa3.62□□□□□ -1.83
NUP42YDR192C HSP10P38910 106 aa3.62□□□□□ -1.83
NUP42YDR192C PEX22P39718 180 aa3.62□□□□□ -1.83
NUP42YDR192C NSA2P40078 261 aaKnown RBP3.62□□□□□ -1.83
NUP42YDR192C LOC1P43586 204 aaPredicted RBP3.62□□□□□ -1.83
NUP42YDR192C YJL118WP47022 219 aa3.62□□□□□ -1.83
NUP42YDR192C YGR050CP53231 118 aa3.62□□□□□ -1.83
NUP42YDR192C ADD37Q03233 198 aa3.62□□□□□ -1.83
NUP42YDR192C ATC1Q04005 294 aa3.62□□□□□ -1.83
NUP42YDR192C SME1Q12330 94 aaPredicted RBP3.62□□□□□ -1.83
NUP42YDR192C ATP14Q12349 124 aa3.62□□□□□ -1.83
NUP42YDR192C MRPL23Q12487 163 aaPredicted RBP3.62□□□□□ -1.83
NUP42YDR192C COX19Q3E731 98 aa3.62□□□□□ -1.83
NUP42YDR192C YOR192C-CQ3E736 78 aa3.62□□□□□ -1.83
NUP42YDR192C RPS25BP0C0T4 108 aaKnown RBP3.61□□□□□ -1.83
NUP42YDR192C RPL18AP0CX49 186 aaKnown RBP3.61□□□□□ -1.83
NUP42YDR192C RPL18BP0CX50 186 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms