RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	BOR1	P53838	576 aa		3.85	□□□□□ -1.79
SUP35	YDR172W	YNL046W	P53956	172 aa		3.85	□□□□□ -1.79
SUP35	YDR172W	DAD3	P69850	94 aa		3.85	□□□□□ -1.79
SUP35	YDR172W	STP4	Q07351	490 aa		3.85	□□□□□ -1.79
SUP35	YDR172W	BPH1	P25356	2167 aa		3.85	□□□□□ -1.79
SUP35	YDR172W	MTR2	P34232	184 aa	Known RBP	3.85	□□□□□ -1.79
SUP35	YDR172W	IMD2	P38697	523 aa	Known RBP	3.85	□□□□□ -1.79
SUP35	YDR172W	YIL163C	P40448	117 aa		3.85	□□□□□ -1.79
SUP35	YDR172W	YJL118W	P47022	219 aa		3.85	□□□□□ -1.79
SUP35	YDR172W	LOA1	Q06508	300 aa		3.85	□□□□□ -1.79
SUP35	YDR172W	CDC7	P06243	507 aa		3.84	□□□□□ -1.79
SUP35	YDR172W	SPS18	P32572	300 aa		3.84	□□□□□ -1.79
SUP35	YDR172W	PHD1	P36093	366 aa		3.84	□□□□□ -1.79
SUP35	YDR172W	MRPL28	P36527	147 aa		3.84	□□□□□ -1.79
SUP35	YDR172W	MIC27	P50945	234 aa		3.84	□□□□□ -1.79
SUP35	YDR172W	SEN15	Q04675	128 aa		3.84	□□□□□ -1.79
SUP35	YDR172W	NAT3	Q06504	195 aa		3.84	□□□□□ -1.79
SUP35	YDR172W	GEP5	Q12393	293 aa		3.84	□□□□□ -1.79
SUP35	YDR172W	YCL048W-A	Q2V2Q2	79 aa		3.84	□□□□□ -1.79
SUP35	YDR172W	HTB1	P02293	131 aa	Known RBP	3.83	□□□□□ -1.8
SUP35	YDR172W	CUP1-1	P0CX80	61 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	CUP1-2	P0CX81	61 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	NHP6A	P11632	93 aa	Known RBP	3.83	□□□□□ -1.8
SUP35	YDR172W	RPS2	P25443	254 aa	Known RBP	3.83	□□□□□ -1.8
SUP35	YDR172W	YKL187C	P34231	750 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	SSS1	P35179	80 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	YKR045C	P36138	183 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	ADH5	P38113	351 aa	Known RBP	3.83	□□□□□ -1.8
SUP35	YDR172W	HUA1	P40325	198 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
SUP35	YDR172W	PAU5	P43575	122 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	YJL163C	P46996	555 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	LSM8	P47093	109 aa	Known RBP	3.83	□□□□□ -1.8
SUP35	YDR172W	YGL185C	P53100	379 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	ATC1	Q04005	294 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	MHR1	Q06630	226 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	SNA4	Q07549	140 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	FMP49	A0A023PZB3	126 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	TOM40	P23644	387 aa	Known RBP	3.83	□□□□□ -1.8
SUP35	YDR172W	TCA17	P32613	152 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	SOR1	P35497	357 aa	Known RBP	3.83	□□□□□ -1.8
SUP35	YDR172W	YBR090C	P38253	122 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	YNR064C	P53750	290 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	YNL234W	P53857	426 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	YNL092W	P53934	400 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	TIM10	P87108	93 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	SOR2	Q07786	357 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	PML1	Q07930	204 aa	Predicted RBP	3.83	□□□□□ -1.8
SUP35	YDR172W	IRC25	Q07951	179 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	YDL009C	Q12210	107 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	YOP1	Q12402	180 aa		3.83	□□□□□ -1.8
SUP35	YDR172W	SOD1	P00445	154 aa	Known RBP	3.82	□□□□□ -1.8
SUP35	YDR172W	PIS1	P06197	220 aa	Known RBP	3.82	□□□□□ -1.8
SUP35	YDR172W	RPS22A	P0C0W1	130 aa	Known RBP	3.82	□□□□□ -1.8
SUP35	YDR172W	PAU19	P0CE85	124 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	PAU21	P0CE86	164 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	PAU22	P0CE87	164 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	RNA15	P25299	296 aa	Predicted RBP	3.82	□□□□□ -1.8
SUP35	YDR172W	YGL010W	P25338	174 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	PAU3	P25610	124 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	HMX1	P32339	317 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	CDS1	P38221	457 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	HSP10	P38910	106 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	YJL213W	P40896	331 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	YPL108W	Q02872	168 aa	Predicted RBP	3.82	□□□□□ -1.8
SUP35	YDR172W	ATO3	Q12359	275 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	YCL001W-B	Q96VH2	84 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
SUP35	YDR172W	DAD2	P36162	133 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	GAT2	P40209	560 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	GPI2	P46961	280 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	YGR149W	P48236	432 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	TMC1	Q08422	150 aa	Predicted RBP	3.82	□□□□□ -1.8
SUP35	YDR172W	FCY1	Q12178	158 aa		3.82	□□□□□ -1.8
SUP35	YDR172W	RPL43A	P0CX25	92 aa	Known RBP	3.81	□□□□□ -1.8
SUP35	YDR172W	RPL43B	P0CX26	92 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	PMU1	P36069	295 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	POP7	P38291	140 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	YAR068W	P39564	161 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	LST8	P41318	303 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	COX16	P47081	118 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	AIM24	P47127	394 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	YGR151C	P53287	111 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	CYT2	Q00873	224 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	MIX17	Q03667	156 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	DCN1	Q12395	269 aa		3.81	□□□□□ -1.8
SUP35	YDR172W	PAA1	Q12447	191 aa	Known RBP	3.81	□□□□□ -1.8
SUP35	YDR172W	VMA16	P23968	213 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	YCR022C	P25620	114 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	RAD23	P32628	398 aa	Known RBP	3.8	□□□□□ -1.8
SUP35	YDR172W	AVT5	P38176	459 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	GPI18	P38211	433 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	CSH1	P38287	376 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	SRP14	P38985	146 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	BDH1	P39714	382 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	YJR096W	P47137	282 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	PUS4	P48567	403 aa	Known RBP	3.8	□□□□□ -1.8
SUP35	YDR172W	UBC11	P52492	156 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	SBH2	P52871	88 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	SSU72	P53538	206 aa	Predicted RBP	3.8	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms