RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W CDS1P38221 457 aa5.22□□□□□ -1.57
LDB16YCL005W MIC27P50945 234 aa5.22□□□□□ -1.57
LDB16YCL005W TIM21P53220 239 aa5.22□□□□□ -1.57
LDB16YCL005W SHH3Q04487 196 aa5.22□□□□□ -1.57
LDB16YCL005W ADH6Q04894 360 aaKnown RBP5.22□□□□□ -1.57
LDB16YCL005W LAC1P28496 418 aa5.21□□□□□ -1.58
LDB16YCL005W ATG8P38182 117 aaRIP-Chip data5.21□□□□□ -1.58not detected
LDB16YCL005W DER1P38307 211 aa5.21□□□□□ -1.58
LDB16YCL005W PHS1P40857 217 aa5.21□□□□□ -1.58
LDB16YCL005W ABM1P47146 123 aa5.21□□□□□ -1.58
LDB16YCL005W STD1Q02794 444 aa5.21□□□□□ -1.58
LDB16YCL005W ATC1Q04005 294 aa5.21□□□□□ -1.58
LDB16YCL005W TRI1Q05024 226 aa5.21□□□□□ -1.58
LDB16YCL005W NDE2Q07500 545 aa5.21□□□□□ -1.58
LDB16YCL005W RAD28Q12021 506 aa5.21□□□□□ -1.58
LDB16YCL005W ATP16Q12165 160 aa5.21□□□□□ -1.58
LDB16YCL005W RDL1Q12305 139 aaKnown RBP5.21□□□□□ -1.58
LDB16YCL005W YPR145C-AQ2V2P0 78 aa5.21□□□□□ -1.58
LDB16YCL005W PHO85P17157 305 aa5.2□□□□□ -1.58
LDB16YCL005W MRPS9P38120 278 aa5.2□□□□□ -1.58
LDB16YCL005W TRS20P38334 175 aa5.2□□□□□ -1.58
LDB16YCL005W LST8P41318 303 aa5.2□□□□□ -1.58
LDB16YCL005W VMA21P41806 77 aa5.2□□□□□ -1.58
LDB16YCL005W TAX4P47030 604 aa5.2□□□□□ -1.58
LDB16YCL005W YGR151CP53287 111 aa5.2□□□□□ -1.58
LDB16YCL005W YHP1Q04116 353 aa5.2□□□□□ -1.58
LDB16YCL005W POS5Q06892 414 aa5.2□□□□□ -1.58
LDB16YCL005W IZH3Q07959 543 aa5.2□□□□□ -1.58
LDB16YCL005W JID1Q12350 301 aa5.2□□□□□ -1.58
LDB16YCL005W ATO3Q12359 275 aa5.2□□□□□ -1.58
LDB16YCL005W PAA1Q12447 191 aaKnown RBP5.2□□□□□ -1.58
LDB16YCL005W YMR316C-AI2HB70 103 aa5.19□□□□□ -1.58
LDB16YCL005W PIS1P06197 220 aaKnown RBP5.19□□□□□ -1.58
LDB16YCL005W POP5P28005 173 aa5.19□□□□□ -1.58
LDB16YCL005W NTF2P33331 125 aaKnown RBP5.19□□□□□ -1.58
LDB16YCL005W YBL071CP38185 102 aa5.19□□□□□ -1.58
LDB16YCL005W YPT31P38555 223 aaKnown RBP5.19□□□□□ -1.58
LDB16YCL005W YAR068WP39564 161 aa5.19□□□□□ -1.58
LDB16YCL005W GTT1P40582 234 aa5.19□□□□□ -1.58
LDB16YCL005W SAS2P40963 338 aa5.19□□□□□ -1.58
LDB16YCL005W LOC1P43586 204 aaPredicted RBP5.19□□□□□ -1.58
LDB16YCL005W BNA1P47096 177 aa5.19□□□□□ -1.58
LDB16YCL005W BNS1P50084 137 aa5.19□□□□□ -1.58
LDB16YCL005W ERV2Q12284 196 aa5.19□□□□□ -1.58
LDB16YCL005W GEP5Q12393 293 aa5.19□□□□□ -1.58
LDB16YCL005W ILV5P06168 395 aaKnown RBP5.18□□□□□ -1.58
LDB16YCL005W DFR1P07807 211 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
LDB16YCL005W RPB3P16370 318 aaKnown RBP5.18□□□□□ -1.58
LDB16YCL005W CDC43P18898 376 aa5.18□□□□□ -1.58
LDB16YCL005W HMX1P32339 317 aa5.18□□□□□ -1.58
LDB16YCL005W NSE4P43124 402 aa5.18□□□□□ -1.58
LDB16YCL005W MGA1P53050 456 aa5.18□□□□□ -1.58
LDB16YCL005W YNL234WP53857 426 aa5.18□□□□□ -1.58
LDB16YCL005W LOA1Q06508 300 aa5.18□□□□□ -1.58
LDB16YCL005W RKI1Q12189 258 aa5.18□□□□□ -1.58
LDB16YCL005W Q0297Q9ZZV8 51 aa5.18□□□□□ -1.58
LDB16YCL005W SOD1P00445 154 aaKnown RBP5.17□□□□□ -1.58
LDB16YCL005W PET494P07390 489 aaPredicted RBP5.17□□□□□ -1.58
LDB16YCL005W RPS22AP0C0W1 130 aaKnown RBP5.17□□□□□ -1.58
LDB16YCL005W RPS2P25443 254 aaKnown RBP5.17□□□□□ -1.58
LDB16YCL005W VMA11P32842 164 aa5.17□□□□□ -1.58
LDB16YCL005W RPS0AP32905 252 aaKnown RBP5.17□□□□□ -1.58
LDB16YCL005W MIA40P36046 403 aa5.17□□□□□ -1.58
LDB16YCL005W YKR045CP36138 183 aa5.17□□□□□ -1.58
LDB16YCL005W BDH1P39714 382 aa5.17□□□□□ -1.58
LDB16YCL005W PAU15P40585 124 aa5.17□□□□□ -1.58
LDB16YCL005W YJL213WP40896 331 aa5.17□□□□□ -1.58
LDB16YCL005W DAN1P47178 298 aa5.17□□□□□ -1.58
LDB16YCL005W YDL183CP48569 320 aa5.17□□□□□ -1.58
LDB16YCL005W LST7P53237 242 aa5.17□□□□□ -1.58
LDB16YCL005W YNR071CP53757 342 aa5.17□□□□□ -1.58
LDB16YCL005W MCH1Q07376 486 aa5.17□□□□□ -1.58
LDB16YCL005W FCY1Q12178 158 aa5.17□□□□□ -1.58
LDB16YCL005W YLR118CQ12354 227 aa5.17□□□□□ -1.58
LDB16YCL005W SNU23Q12368 194 aaPredicted RBP5.17□□□□□ -1.58
LDB16YCL005W HSP12P22943 109 aaKnown RBP5.16□□□□□ -1.58
LDB16YCL005W COQ3P27680 312 aa5.16□□□□□ -1.58
LDB16YCL005W SDH4P37298 181 aa5.16□□□□□ -1.58
LDB16YCL005W AVT5P38176 459 aa5.16□□□□□ -1.58
LDB16YCL005W CSH1P38287 376 aa5.16□□□□□ -1.58
LDB16YCL005W IMD2P38697 523 aaKnown RBP5.16□□□□□ -1.58
LDB16YCL005W HSP10P38910 106 aa5.16□□□□□ -1.58
LDB16YCL005W CYB5P40312 120 aa5.16□□□□□ -1.58
LDB16YCL005W ATG27P46989 271 aa5.16□□□□□ -1.58
LDB16YCL005W DSK2P48510 373 aa5.16□□□□□ -1.58
LDB16YCL005W YGR026WP53217 278 aa5.16□□□□□ -1.58
LDB16YCL005W DAD3P69850 94 aa5.16□□□□□ -1.58
LDB16YCL005W SDH7Q04401 133 aa5.16□□□□□ -1.58
LDB16YCL005W CDC7P06243 507 aa5.15□□□□□ -1.59
LDB16YCL005W RNA15P25299 296 aaPredicted RBP5.15□□□□□ -1.59
LDB16YCL005W YCR022CP25620 114 aa5.15□□□□□ -1.59
LDB16YCL005W ELF1P36053 145 aa5.15□□□□□ -1.59
LDB16YCL005W RRT1P38192 103 aa5.15□□□□□ -1.59
LDB16YCL005W DOG2P38773 246 aa5.15□□□□□ -1.59
LDB16YCL005W DOG1P38774 246 aa5.15□□□□□ -1.59
LDB16YCL005W YGR018CP53211 109 aa5.15□□□□□ -1.59
LDB16YCL005W LDS2Q08218 356 aa5.15□□□□□ -1.59
LDB16YCL005W NHP6AP11632 93 aaKnown RBP5.14□□□□□ -1.59
LDB16YCL005W POF1P25576 258 aa5.14□□□□□ -1.59
LDB16YCL005W SUA7P29055 345 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms