RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B APS3P47064 194 aa-1.17□□□□□ -2.6
snR39BsnR39B ALG13P53178 202 aa-1.17□□□□□ -2.6
snR39BsnR39B HHT1P61830 136 aa-1.17□□□□□ -2.6
snR39BsnR39B KRE28Q04431 385 aa-1.17□□□□□ -2.6
snR39BsnR39B RPL25P04456 142 aaKnown RBP-1.18□□□□□ -2.6
snR39BsnR39B RHO1P06780 209 aaKnown RBP-1.18□□□□□ -2.6
snR39BsnR39B MTW1P39731 289 aa-1.18□□□□□ -2.6
snR39BsnR39B RTT105P40063 208 aa-1.18□□□□□ -2.6
snR39BsnR39B LSM7P53905 115 aaKnown RBP-1.18□□□□□ -2.6
snR39BsnR39B ERV25P54837 211 aaKnown RBP-1.18□□□□□ -2.6
snR39BsnR39B PIR1Q03178 341 aa-1.18□□□□□ -2.6
snR39BsnR39B DML1Q03652 475 aa-1.18□□□□□ -2.6
snR39BsnR39B ATG31Q12421 196 aa-1.18□□□□□ -2.6
snR39BsnR39B STF1P01098 86 aa-1.19□□□□□ -2.6
snR39BsnR39B MATALPHA2P0CY08 210 aa-1.19□□□□□ -2.6
snR39BsnR39B HMLALPHA2P0CY09 210 aa-1.19□□□□□ -2.6
snR39BsnR39B RPL24BP24000 155 aaKnown RBP-1.19□□□□□ -2.6
snR39BsnR39B TAF14P35189 244 aa-1.19□□□□□ -2.6
snR39BsnR39B SKI6P46948 246 aaPredicted RBP-1.19□□□□□ -2.6
snR39BsnR39B YOL014WQ08110 124 aa-1.19□□□□□ -2.6
snR39BsnR39B VAM10Q08474 114 aa-1.19□□□□□ -2.6
snR39BsnR39B ATG41Q12048 136 aa-1.19□□□□□ -2.6
snR39BsnR39B ATG8P38182 117 aaRIP-Chip data-1.2□□□□□ -2.6not detected
snR39BsnR39B RPC17P47076 161 aa-1.2□□□□□ -2.6
snR39BsnR39B MIC26P50087 233 aa-1.2□□□□□ -2.6
snR39BsnR39B GPI17Q04080 534 aa-1.2□□□□□ -2.6
snR39BsnR39B PAM18Q07914 168 aa-1.2□□□□□ -2.6
snR39BsnR39B DAS2Q12084 232 aa-1.2□□□□□ -2.6
snR39BsnR39B RIB3Q99258 208 aa-1.2□□□□□ -2.6
snR39BsnR39B GCN3P14741 305 aa-1.21□□□□□ -2.6
snR39BsnR39B CNB1P25296 175 aa-1.21□□□□□ -2.6
snR39BsnR39B LDB7P38210 180 aa-1.21□□□□□ -2.6
snR39BsnR39B HMF1P40037 129 aaKnown RBP-1.21□□□□□ -2.6
snR39BsnR39B ADO1P47143 340 aaKnown RBP-1.21□□□□□ -2.6
snR39BsnR39B GRX5Q02784 150 aa-1.21□□□□□ -2.6
snR39BsnR39B ATP20Q12233 115 aa-1.21□□□□□ -2.6
snR39BsnR39B CAF4P36130 643 aa-1.22□□□□□ -2.6
snR39BsnR39B YOR381W-AQ3E804 55 aa-1.22□□□□□ -2.6
snR39BsnR39B HUG1Q6Q5K6 68 aa-1.22□□□□□ -2.6
snR39BsnR39B TEL1P38110 2787 aa-1.23□□□□□ -2.61
snR39BsnR39B PHO13P19881 312 aa-1.23□□□□□ -2.61
snR39BsnR39B RRT1P38192 103 aa-1.23□□□□□ -2.61
snR39BsnR39B AIM2P39721 246 aa-1.23□□□□□ -2.61
snR39BsnR39B GLC8P41818 229 aa-1.23□□□□□ -2.61
snR39BsnR39B YFL019CP43576 117 aa-1.23□□□□□ -2.61
snR39BsnR39B RIM9Q04734 239 aa-1.23□□□□□ -2.61
snR39BsnR39B YML100W-AQ8TGT0 57 aa-1.23□□□□□ -2.61
snR39BsnR39B BNA6P43619 295 aa-1.24□□□□□ -2.61
snR39BsnR39B YPR127WQ06494 345 aa-1.24□□□□□ -2.61
snR39BsnR39B TAF2P23255 1407 aa-1.24□□□□□ -2.61
snR39BsnR39B MER1P16523 270 aa-1.25□□□□□ -2.61
snR39BsnR39B NTG1P31378 399 aa-1.25□□□□□ -2.61
snR39BsnR39B AUA1P32450 94 aa-1.25□□□□□ -2.61
snR39BsnR39B YRA2P36036 203 aaKnown RBP RIP-Chip data-1.25□□□□□ -2.61not detected
snR39BsnR39B FMP23P38231 175 aa-1.25□□□□□ -2.61
snR39BsnR39B CMC4Q3E7A9 73 aa-1.25□□□□□ -2.61
snR39BsnR39B IGO2Q9P305 131 aa-1.25□□□□□ -2.61
snR39BsnR39B SSO1P32867 290 aa-1.26□□□□□ -2.61
snR39BsnR39B NSG1P38837 291 aa-1.26□□□□□ -2.61
snR39BsnR39B OTU1P43558 301 aa-1.26□□□□□ -2.61
snR39BsnR39B TDA4P47153 279 aa-1.26□□□□□ -2.61
snR39BsnR39B YMR315WQ04869 349 aaKnown RBP-1.26□□□□□ -2.61
snR39BsnR39B YOL164W-AQ3E7A5 60 aa-1.26□□□□□ -2.61
snR39BsnR39B COA6Q3E846 104 aa-1.26□□□□□ -2.61
snR39BsnR39B MBF1O14467 151 aaKnown RBP-1.27□□□□□ -2.61
snR39BsnR39B NSA2P40078 261 aaKnown RBP-1.27□□□□□ -2.61
snR39BsnR39B GLR1P41921 483 aaKnown RBP-1.27□□□□□ -2.61
snR39BsnR39B YJL009WP47078 108 aa-1.27□□□□□ -2.61
snR39BsnR39B HSL1P34244 1518 aa-1.28□□□□□ -2.61
snR39BsnR39B RPL28P02406 149 aaKnown RBP-1.28□□□□□ -2.61
snR39BsnR39B CDC33P07260 213 aaKnown RBP-1.28□□□□□ -2.61
snR39BsnR39B MATALPHA1P0CY06 175 aa-1.28□□□□□ -2.61
snR39BsnR39B HMLALPHA1P0CY07 175 aa-1.28□□□□□ -2.61
snR39BsnR39B SPT14P32363 452 aa-1.28□□□□□ -2.61
snR39BsnR39B MRPL24P36525 258 aaPredicted RBP-1.28□□□□□ -2.61
snR39BsnR39B RFC4P40339 323 aaKnown RBP-1.28□□□□□ -2.61
snR39BsnR39B RTC4P53850 401 aa-1.28□□□□□ -2.61
snR39BsnR39B SEC16P48415 2195 aaKnown RBP-1.29□□□□□ -2.62
snR39BsnR39B RPS25BP0C0T4 108 aaKnown RBP-1.29□□□□□ -2.62
snR39BsnR39B YMR31P19955 123 aa-1.29□□□□□ -2.62
snR39BsnR39B ATX1P38636 73 aa-1.29□□□□□ -2.62
snR39BsnR39B RTR1P40084 226 aaPredicted RBP-1.29□□□□□ -2.62
snR39BsnR39B COX15P40086 486 aa-1.29□□□□□ -2.62
snR39BsnR39B IRC18P47056 224 aa-1.29□□□□□ -2.62
snR39BsnR39B SBH1P52870 82 aa-1.29□□□□□ -2.62
snR39BsnR39B SGF11Q03067 99 aa-1.29□□□□□ -2.62
snR39BsnR39B SRL4Q03085 281 aa-1.29□□□□□ -2.62
snR39BsnR39B GAL83Q04739 417 aa-1.29□□□□□ -2.62
snR39BsnR39B YLR283WQ05867 314 aa-1.29□□□□□ -2.62
snR39BsnR39B KAP95Q06142 861 aaKnown RBP-1.29□□□□□ -2.62
snR39BsnR39B YDL157CQ12082 118 aa-1.29□□□□□ -2.62
snR39BsnR39B MDM32Q12171 622 aa-1.29□□□□□ -2.62
snR39BsnR39B RPS25AQ3E792 108 aaPredicted RBP-1.29□□□□□ -2.62
snR39BsnR39B HSP150P32478 413 aa-1.3□□□□□ -2.62
snR39BsnR39B SPS18P32572 300 aa-1.3□□□□□ -2.62
snR39BsnR39B YCR087C-AP37263 153 aa-1.3□□□□□ -2.62
snR39BsnR39B RTC3P38804 111 aaPredicted RBP-1.3□□□□□ -2.62
snR39BsnR39B YGR269WP40326 108 aa-1.3□□□□□ -2.62
snR39BsnR39B PAC10P48363 199 aa-1.3□□□□□ -2.62
snR39BsnR39B DIE2P50076 525 aa-1.3□□□□□ -2.62
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms