RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C RFC4P40339 323 aaKnown RBP0.17□□□□□ -2.38
NIP100YPL174C GCN20P43535 752 aaKnown RBP0.17□□□□□ -2.38
NIP100YPL174C ALB1P47019 175 aaPredicted RBP0.17□□□□□ -2.38
NIP100YPL174C RAD17P48581 401 aa0.17□□□□□ -2.38
NIP100YPL174C DYN3Q04949 312 aa0.17□□□□□ -2.38
NIP100YPL174C DUR1,2P32528 1835 aaKnown RBP0.17□□□□□ -2.38
NIP100YPL174C BUD3P25558 1636 aa0.17□□□□□ -2.38
NIP100YPL174C MRPL15P36523 253 aa0.17□□□□□ -2.38
NIP100YPL174C IRC18P47056 224 aa0.17□□□□□ -2.38
NIP100YPL174C BNA7Q04066 261 aa0.17□□□□□ -2.38
NIP100YPL174C ABP140Q08641 628 aaKnown RBP0.17□□□□□ -2.38
NIP100YPL174C GRX5Q02784 150 aa0.16□□□□□ -2.38
NIP100YPL174C PIR1Q03178 341 aa0.16□□□□□ -2.38
NIP100YPL174C YMR253CQ04835 414 aa0.16□□□□□ -2.38
NIP100YPL174C YML100W-AQ8TGT0 57 aa0.16□□□□□ -2.38
NIP100YPL174C VTH1P40438 1549 aa0.16□□□□□ -2.38
NIP100YPL174C VTH2P40890 1549 aa0.16□□□□□ -2.38
NIP100YPL174C MBF1O14467 151 aaKnown RBP0.16□□□□□ -2.38
NIP100YPL174C SEC4P07560 215 aaKnown RBP0.16□□□□□ -2.38
NIP100YPL174C OCH1P31755 480 aa0.16□□□□□ -2.38
NIP100YPL174C YCR087C-AP37263 153 aa0.16□□□□□ -2.38
NIP100YPL174C SER2P42941 309 aa0.16□□□□□ -2.38
NIP100YPL174C SED1Q01589 338 aa0.16□□□□□ -2.38
NIP100YPL174C YOR1P53049 1477 aa0.16□□□□□ -2.38
NIP100YPL174C TY3B-GQ99315 1547 aa0.15□□□□□ -2.38
NIP100YPL174C TRM732Q03496 1420 aa0.15□□□□□ -2.39
NIP100YPL174C NUP192P47054 1683 aa0.15□□□□□ -2.39
NIP100YPL174C NUP159P40477 1460 aa0.15□□□□□ -2.39
NIP100YPL174C STF2P16965 84 aa0.15□□□□□ -2.39
NIP100YPL174C SEC14P24280 304 aaKnown RBP0.15□□□□□ -2.39
NIP100YPL174C TMA22P47089 198 aaPredicted RBP0.15□□□□□ -2.39
NIP100YPL174C PET191Q02772 108 aa0.15□□□□□ -2.39
NIP100YPL174C VPS71Q03433 280 aa0.15□□□□□ -2.39
NIP100YPL174C FIT1Q04433 528 aa0.15□□□□□ -2.39
NIP100YPL174C DGK1Q12382 290 aa0.15□□□□□ -2.39
NIP100YPL174C YDR157WA0A023PZE8 133 aa0.15□□□□□ -2.39
NIP100YPL174C CDC33P07260 213 aaKnown RBP0.15□□□□□ -2.39
NIP100YPL174C UBC8P28263 218 aa0.15□□□□□ -2.39
NIP100YPL174C UGX2P32772 223 aa0.15□□□□□ -2.39
NIP100YPL174C DAD4P69851 72 aa0.15□□□□□ -2.39
NIP100YPL174C GET4Q12125 312 aa0.15□□□□□ -2.39
NIP100YPL174C RTC3P38804 111 aaPredicted RBP0.14□□□□□ -2.39
NIP100YPL174C UBC12P52491 188 aa0.14□□□□□ -2.39
NIP100YPL174C CWC23P52868 283 aaPredicted RBP0.14□□□□□ -2.39
NIP100YPL174C SBH1P52870 82 aa0.14□□□□□ -2.39
NIP100YPL174C YNL033WP53964 284 aa0.14□□□□□ -2.39
NIP100YPL174C LCL2Q08045 131 aa0.14□□□□□ -2.39
NIP100YPL174C PEP1P32319 1579 aa0.14□□□□□ -2.39
NIP100YPL174C RRP17Q04031 235 aaPredicted RBP0.14□□□□□ -2.39
NIP100YPL174C BCK1Q01389 1478 aa0.13□□□□□ -2.39
NIP100YPL174C TAO3P40468 2376 aa0.13□□□□□ -2.39
NIP100YPL174C RRP5Q05022 1729 aaKnown RBP0.13□□□□□ -2.39
NIP100YPL174C YCR023CP25351 611 aa0.13□□□□□ -2.39
NIP100YPL174C OTU1P43558 301 aa0.13□□□□□ -2.39
NIP100YPL174C GDB1Q06625 1536 aa0.13□□□□□ -2.39
NIP100YPL174C HTB1P02293 131 aaKnown RBP0.13□□□□□ -2.39
NIP100YPL174C HTB2P02294 131 aa0.13□□□□□ -2.39
NIP100YPL174C NTG1P31378 399 aa0.13□□□□□ -2.39
NIP100YPL174C YDR391CQ04170 232 aa0.13□□□□□ -2.39
NIP100YPL174C ACC1Q00955 2233 aaKnown RBP0.13□□□□□ -2.39
NIP100YPL174C SNF4P12904 322 aa0.12□□□□□ -2.39
NIP100YPL174C CBF1P17106 351 aa0.12□□□□□ -2.39
NIP100YPL174C TRS20P38334 175 aa0.12□□□□□ -2.39
NIP100YPL174C YHL037CP38733 133 aa0.12□□□□□ -2.39
NIP100YPL174C NCB2Q92317 146 aa0.12□□□□□ -2.39
NIP100YPL174C IGO2Q9P305 131 aa0.12□□□□□ -2.39
NIP100YPL174C GCN2P15442 1659 aa0.12□□□□□ -2.39
NIP100YPL174C IKI1P38874 309 aa0.12□□□□□ -2.39
NIP100YPL174C DCV1P43595 202 aa0.12□□□□□ -2.39
NIP100YPL174C YNG1Q08465 219 aa0.12□□□□□ -2.39
NIP100YPL174C YPR014CQ6B0W2 109 aa0.12□□□□□ -2.39
NIP100YPL174C TRM3Q07527 1436 aa0.11□□□□□ -2.39
NIP100YPL174C YLR422WQ06409 1932 aa0.11□□□□□ -2.39
NIP100YPL174C RPS24AP0CX31 135 aaKnown RBP0.11□□□□□ -2.39
NIP100YPL174C RPS24BP0CX32 135 aaKnown RBP0.11□□□□□ -2.39
NIP100YPL174C MGT1P26188 188 aa0.11□□□□□ -2.39
NIP100YPL174C SPC25P40014 221 aa0.11□□□□□ -2.39
NIP100YPL174C THG1P53215 237 aaKnown RBP0.11□□□□□ -2.39
NIP100YPL174C RNH202Q05635 350 aa0.11□□□□□ -2.39
NIP100YPL174C YLR031WQ07978 186 aa0.11□□□□□ -2.39
NIP100YPL174C CLG1P35190 452 aa0.11□□□□□ -2.39
NIP100YPL174C YJR015WP47090 510 aa0.11□□□□□ -2.39
NIP100YPL174C MMS2P53152 137 aa0.11□□□□□ -2.39
NIP100YPL174C VMR1P38735 1592 aa0.11□□□□□ -2.39
NIP100YPL174C PRE1P22141 198 aaKnown RBP0.1□□□□□ -2.39
NIP100YPL174C MAK5P38112 773 aaPredicted RBP0.1□□□□□ -2.39
NIP100YPL174C YJR111CP47148 283 aaKnown RBP0.1□□□□□ -2.39
NIP100YPL174C ELP6Q04868 273 aa0.1□□□□□ -2.39
NIP100YPL174C YPR203WQ08994 102 aa0.1□□□□□ -2.39
NIP100YPL174C YOR342CQ12182 319 aa0.1□□□□□ -2.39
NIP100YPL174C GIS3Q12418 502 aa0.1□□□□□ -2.39
NIP100YPL174C TAR1Q8TGM6 124 aa0.1□□□□□ -2.39
NIP100YPL174C ERG10P41338 398 aaKnown RBP0.1□□□□□ -2.39
NIP100YPL174C HRD1Q08109 551 aa0.1□□□□□ -2.39
NIP100YPL174C CCW12Q12127 133 aa0.1□□□□□ -2.39
NIP100YPL174C RUD3Q12234 484 aaKnown RBP0.1□□□□□ -2.39
NIP100YPL174C FIG2P25653 1609 aa0.1□□□□□ -2.39
NIP100YPL174C GCY1P14065 312 aaKnown RBP RIP-Chip data0.09□□□□□ -2.39not detected
NIP100YPL174C YBR242WP38331 238 aa0.09□□□□□ -2.39
NIP100YPL174C YGL235WP53071 178 aa0.09□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms