RNA–Protein interactions for RNA: YPL158C

AIM44, Transcript of Protein that regulates Cdc42p and Rho1p, yeast

Gene AIM44, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AIM44	YPL158C	SHH4	Q06236	168 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	SNF4	P12904	322 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	MTW1	P39731	289 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	YER134C	P40081	178 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	RFC2	P40348	353 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	YFL065C	P43539	102 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	HOP2	P53187	214 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	THI74	Q04083	370 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	ELP6	Q04868	273 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	YDL241W	Q07738	123 aa		0.62	□□□□□ -2.31
AIM44	YPL158C	YOL162W	P0CF19	215 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	UBI4	P0CG63	381 aa	Known RBP	0.61	□□□□□ -2.31
AIM44	YPL158C	TRR1	P29509	319 aa	Known RBP	0.61	□□□□□ -2.31
AIM44	YPL158C	SRP14	P38985	146 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	YEL067C	P39978	195 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	FLX1	P40464	311 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	YFH7	P43591	353 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	ERG25	P53045	309 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	RTC4	P53850	401 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	AVO2	Q04749	426 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	UPS1	Q05776	175 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	YLR031W	Q07978	186 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	MRS4	P23500	304 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	YBR209W	P38311	105 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	GLR1	P41921	483 aa	Known RBP	0.61	□□□□□ -2.31
AIM44	YPL158C	FMP32	P43557	207 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	YAE1	P47118	141 aa	Predicted RBP	0.61	□□□□□ -2.31
AIM44	YPL158C	VPS71	Q03433	280 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	DYN3	Q04949	312 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	RDI1	Q12434	202 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	TAR1	Q8TGM6	124 aa		0.61	□□□□□ -2.31
AIM44	YPL158C	SAC3	P46674	1301 aa		0.6	□□□□□ -2.31
AIM44	YPL158C	MDM35	O60200	86 aa		0.6	□□□□□ -2.31
AIM44	YPL158C	SEC14	P24280	304 aa	Known RBP	0.6	□□□□□ -2.31
AIM44	YPL158C	YCL042W	P25572	119 aa		0.6	□□□□□ -2.31
AIM44	YPL158C	UBC6	P33296	250 aa	Predicted RBP	0.6	□□□□□ -2.31
AIM44	YPL158C	TMA19	P35691	167 aa	Known RBP	0.6	□□□□□ -2.31
AIM44	YPL158C	NSG1	P38837	291 aa		0.6	□□□□□ -2.31
AIM44	YPL158C	TVP23	P38962	199 aa		0.6	□□□□□ -2.31
AIM44	YPL158C	YLR036C	Q07986	203 aa		0.6	□□□□□ -2.31
AIM44	YPL158C	QCR8	P08525	94 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	CAF4	P36130	643 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	AME1	P38313	324 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	AIM2	P39721	246 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	YEL028W	P39989	153 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	EDC3	P39998	551 aa	Known RBP	0.59	□□□□□ -2.31
AIM44	YPL158C	RPL13B	P40212	199 aa	Known RBP	0.59	□□□□□ -2.31
AIM44	YPL158C	NSE4	P43124	402 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	SBH1	P52870	82 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	UBC7	Q02159	165 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	YHP1	Q04116	353 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	CUE4	Q04201	117 aa	Predicted RBP	0.59	□□□□□ -2.31
AIM44	YPL158C	SHH3	Q04487	196 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	YLR050C	Q12155	161 aa	Known RBP	0.59	□□□□□ -2.31
AIM44	YPL158C	RPL13A	Q12690	199 aa	Predicted RBP	0.59	□□□□□ -2.31
AIM44	YPL158C	YLR412C-A	Q3E742	68 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	CMC4	Q3E7A9	73 aa		0.59	□□□□□ -2.31
AIM44	YPL158C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.59	□□□□□ -2.31
AIM44	YPL158C	NSP1	P14907	823 aa	Known RBP	0.59	□□□□□ -2.32
AIM44	YPL158C	FPR1	P20081	114 aa	Known RBP	0.59	□□□□□ -2.32
AIM44	YPL158C	CDC39	P25655	2108 aa	Known RBP	0.59	□□□□□ -2.32
AIM44	YPL158C	ARC19	P33204	171 aa	Known RBP	0.59	□□□□□ -2.32
AIM44	YPL158C	RPB7	P34087	171 aa		0.59	□□□□□ -2.32
AIM44	YPL158C	SFK1	P35735	353 aa		0.59	□□□□□ -2.32
AIM44	YPL158C	ETR1	P38071	380 aa		0.59	□□□□□ -2.32
AIM44	YPL158C	FIP1	P45976	327 aa		0.59	□□□□□ -2.32
AIM44	YPL158C	YDR102C	Q03864	110 aa		0.59	□□□□□ -2.32
AIM44	YPL158C	PRP11	Q07350	266 aa	Predicted RBP	0.59	□□□□□ -2.32
AIM44	YPL158C	COA3	Q3E7B2	85 aa		0.59	□□□□□ -2.32
AIM44	YPL158C	TFC1	P32367	649 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	FES1	P38260	290 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	HPA3	P39979	161 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	YGL235W	P53071	178 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	HPT1	Q04178	221 aa	Known RBP	0.58	□□□□□ -2.32
AIM44	YPL158C	PEX11	Q12462	236 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	YNL146C-A	Q3E7Z1	64 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	YHR212W-A	P0CX91	67 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	GPA2	P10823	449 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	STP22	P25604	385 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	YHL042W	P38729	150 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	NSA2	P40078	261 aa	Known RBP	0.58	□□□□□ -2.32
AIM44	YPL158C	YJL218W	P40892	196 aa	Known RBP	0.58	□□□□□ -2.32
AIM44	YPL158C	YGL101W	P53144	215 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	YDC1	Q02896	317 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	DML1	Q03652	475 aa		0.58	□□□□□ -2.32
AIM44	YPL158C	SPT14	P32363	452 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.57	□□□□□ -2.32	not detected
AIM44	YPL158C	YMR320W	Q04897	101 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	YPR174C	Q06616	221 aa	Predicted RBP	0.57	□□□□□ -2.32
AIM44	YPL158C	ATG41	Q12048	136 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	YLR046C	Q12253	270 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	UBR1	P19812	1950 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	CCS1	P40202	249 aa	Known RBP	0.57	□□□□□ -2.32
AIM44	YPL158C	HYR1	P40581	163 aa	Known RBP	0.57	□□□□□ -2.32
AIM44	YPL158C	CCC1	P47818	322 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	YPR114W	Q06107	315 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	YET3	Q07451	203 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	YOR214C	Q12282	236 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	CMC2	Q3E7A4	109 aa		0.57	□□□□□ -2.32
AIM44	YPL158C	INO4	P13902	151 aa		0.56	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 156.5 ms