RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C NIP7Q08962 181 aaKnown RBP4.5□□□□□ -1.69
RAT1YOR048C ATG40Q99325 256 aa4.5□□□□□ -1.69
RAT1YOR048C YNR071CP53757 342 aa4.49□□□□□ -1.69
RAT1YOR048C LOA1Q06508 300 aa4.49□□□□□ -1.69
RAT1YOR048C RFM1Q12192 310 aa4.49□□□□□ -1.69
RAT1YOR048C YOR029WQ12243 111 aa4.49□□□□□ -1.69
RAT1YOR048C RPL13BP40212 199 aaKnown RBP4.49□□□□□ -1.69
RAT1YOR048C YDR286CQ05530 114 aa4.49□□□□□ -1.69
RAT1YOR048C RPL13AQ12690 199 aaPredicted RBP4.49□□□□□ -1.69
RAT1YOR048C SEN1Q00416 2231 aaKnown RBP4.49□□□□□ -1.69
RAT1YOR048C BPH1P25356 2167 aa4.49□□□□□ -1.69
RAT1YOR048C UTH1P36135 365 aa4.48□□□□□ -1.69
RAT1YOR048C TIF11P38912 153 aaKnown RBP4.48□□□□□ -1.69
RAT1YOR048C IRC22P40006 225 aa4.48□□□□□ -1.69
RAT1YOR048C COX15P40086 486 aa4.48□□□□□ -1.69
RAT1YOR048C YER188WP40103 239 aa4.48□□□□□ -1.69
RAT1YOR048C YIL029CP40538 142 aa4.48□□□□□ -1.69
RAT1YOR048C ECO1P43605 281 aa4.48□□□□□ -1.69
RAT1YOR048C TOM7P53507 60 aa4.48□□□□□ -1.69
RAT1YOR048C HSK3P69852 69 aa4.48□□□□□ -1.69
RAT1YOR048C YOR292CQ08743 309 aa4.48□□□□□ -1.69
RAT1YOR048C AME1P38313 324 aa4.48□□□□□ -1.69
RAT1YOR048C SRP14P38985 146 aa4.48□□□□□ -1.69
RAT1YOR048C YEL057CP39983 233 aa4.48□□□□□ -1.69
RAT1YOR048C ERG25P53045 309 aa4.48□□□□□ -1.69
RAT1YOR048C YNL165WP53891 406 aa4.48□□□□□ -1.69
RAT1YOR048C IZH1Q03419 316 aa4.48□□□□□ -1.69
RAT1YOR048C DAL3P32459 195 aa4.48□□□□□ -1.69
RAT1YOR048C YER084WP40057 128 aa4.48□□□□□ -1.69
RAT1YOR048C GLC8P41818 229 aa4.48□□□□□ -1.69
RAT1YOR048C LCL3P53153 274 aa4.48□□□□□ -1.69
RAT1YOR048C HHT1P61830 136 aa4.48□□□□□ -1.69
RAT1YOR048C SHH3Q04487 196 aa4.48□□□□□ -1.69
RAT1YOR048C SEC4P07560 215 aaKnown RBP4.47□□□□□ -1.69
RAT1YOR048C UBS1P38290 277 aa4.47□□□□□ -1.69
RAT1YOR048C RIB4P50861 169 aaPredicted RBP4.47□□□□□ -1.69
RAT1YOR048C NRM1P53718 249 aa4.47□□□□□ -1.69
RAT1YOR048C ATG4P53867 494 aa4.47□□□□□ -1.69
RAT1YOR048C TPT1Q12272 230 aaKnown RBP4.47□□□□□ -1.69
RAT1YOR048C SOD1P00445 154 aaKnown RBP4.47□□□□□ -1.69
RAT1YOR048C HMX1P32339 317 aa4.47□□□□□ -1.69
RAT1YOR048C ARC18Q05933 178 aaKnown RBP4.47□□□□□ -1.69
RAT1YOR048C USB1Q12208 290 aaKnown RBP4.47□□□□□ -1.69
RAT1YOR048C YPR071WQ12346 211 aa4.47□□□□□ -1.69
RAT1YOR048C YOP1Q12402 180 aa4.47□□□□□ -1.69
RAT1YOR048C NOP1P15646 327 aaKnown RBP4.46□□□□□ -1.69
RAT1YOR048C NTC20P38302 140 aaPredicted RBP4.46□□□□□ -1.69
RAT1YOR048C FYV7Q12247 151 aa4.46□□□□□ -1.69
RAT1YOR048C TDA4P47153 279 aa4.46□□□□□ -1.7
RAT1YOR048C SDS23P53172 527 aa4.46□□□□□ -1.7
RAT1YOR048C MRL1Q06815 381 aa4.46□□□□□ -1.7
RAT1YOR048C NDE2Q07500 545 aa4.46□□□□□ -1.7
RAT1YOR048C YOL024WQ08172 172 aa4.46□□□□□ -1.7
RAT1YOR048C YOR105WQ08504 108 aa4.46□□□□□ -1.7
RAT1YOR048C SMT3Q12306 101 aaKnown RBP4.46□□□□□ -1.7
RAT1YOR048C TEL1P38110 2787 aa4.46□□□□□ -1.7
RAT1YOR048C COX1P00401 534 aa4.46□□□□□ -1.7
RAT1YOR048C ILV5P06168 395 aaKnown RBP4.46□□□□□ -1.7
RAT1YOR048C SAE3P89114 91 aa4.46□□□□□ -1.7
RAT1YOR048C APS2Q00381 147 aa4.46□□□□□ -1.7
RAT1YOR048C RAV2Q03956 351 aa4.46□□□□□ -1.7
RAT1YOR048C IZH3Q07959 543 aa4.46□□□□□ -1.7
RAT1YOR048C FOL3Q12676 427 aaPredicted RBP4.46□□□□□ -1.7
RAT1YOR048C FZF1P32805 299 aa4.45□□□□□ -1.7
RAT1YOR048C YGP1P38616 354 aaKnown RBP4.45□□□□□ -1.7
RAT1YOR048C YNL200CP40165 246 aaKnown RBP4.45□□□□□ -1.7
RAT1YOR048C GON7P46984 123 aa4.45□□□□□ -1.7
RAT1YOR048C RPL39P04650 51 aa4.45□□□□□ -1.7
RAT1YOR048C QCR9P22289 66 aa4.45□□□□□ -1.7
RAT1YOR048C SPS18P32572 300 aa4.45□□□□□ -1.7
RAT1YOR048C TEM1P38987 245 aa4.45□□□□□ -1.7
RAT1YOR048C PCP1P53259 346 aa4.45□□□□□ -1.7
RAT1YOR048C CPD1P53314 239 aa4.45□□□□□ -1.7
RAT1YOR048C ATC1Q04005 294 aa4.45□□□□□ -1.7
RAT1YOR048C YMR254CQ04838 102 aa4.45□□□□□ -1.7
RAT1YOR048C TGS1Q12052 315 aa4.45□□□□□ -1.7
RAT1YOR048C COX2P00410 251 aa4.44□□□□□ -1.7
RAT1YOR048C GSP1P32835 219 aaKnown RBP4.44□□□□□ -1.7
RAT1YOR048C GSP2P32836 220 aaKnown RBP4.44□□□□□ -1.7
RAT1YOR048C YBR184WP38299 523 aa4.44□□□□□ -1.7
RAT1YOR048C SEC24P40482 926 aaKnown RBP4.44□□□□□ -1.7
RAT1YOR048C UPS3Q04006 179 aa4.44□□□□□ -1.7
RAT1YOR048C ADE8P04161 214 aa4.44□□□□□ -1.7
RAT1YOR048C RNA15P25299 296 aaPredicted RBP4.44□□□□□ -1.7
RAT1YOR048C YUH1P35127 236 aa4.44□□□□□ -1.7
RAT1YOR048C NNK1P36003 928 aa4.44□□□□□ -1.7
RAT1YOR048C LSM2P38203 95 aaKnown RBP4.44□□□□□ -1.7
RAT1YOR048C CCS1P40202 249 aaKnown RBP4.44□□□□□ -1.7
RAT1YOR048C UBC13P52490 153 aa4.44□□□□□ -1.7
RAT1YOR048C VMA16P23968 213 aa4.43□□□□□ -1.7
RAT1YOR048C ROX3P25046 220 aa4.43□□□□□ -1.7
RAT1YOR048C YGL015CP33199 130 aa4.43□□□□□ -1.7
RAT1YOR048C DUG3P53871 357 aa4.43□□□□□ -1.7
RAT1YOR048C RUB1Q03919 77 aa4.43□□□□□ -1.7
RAT1YOR048C YDL157CQ12082 118 aa4.43□□□□□ -1.7
RAT1YOR048C RKI1Q12189 258 aa4.43□□□□□ -1.7
RAT1YOR048C WIP1Q2V2P8 89 aa4.43□□□□□ -1.7
RAT1YOR048C Q0144Q9ZZW2 109 aa4.43□□□□□ -1.7
RAT1YOR048C GCN1P33892 2672 aaKnown RBP4.43□□□□□ -1.7
RAT1YOR048C ERS1P17261 260 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms