RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C TY1A-ORP0CX59 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-PR2P0CX60 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-DR5P0CX65 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-ER2P0CX66 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-GR3P0CX67 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-LR1P0CX68 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-MR2P0CX69 440 aa7.52□□□□□ -1.21
SEC61YLR378C MRS3P10566 314 aa7.52□□□□□ -1.21
SEC61YLR378C MRP2P10663 115 aaPredicted RBP7.52□□□□□ -1.21
SEC61YLR378C PHO85P17157 305 aa7.52□□□□□ -1.21
SEC61YLR378C FPR2P32472 135 aa7.52□□□□□ -1.21
SEC61YLR378C MRPL4P36517 319 aa7.52□□□□□ -1.21
SEC61YLR378C QDR3P38227 689 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-JR2P47099 440 aa7.52□□□□□ -1.21
SEC61YLR378C HHO1P53551 258 aa7.52□□□□□ -1.21
SEC61YLR378C STD1Q02794 444 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-DR1Q03856 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-ML1Q04706 440 aaKnown RBP7.52□□□□□ -1.21
SEC61YLR378C CTR3Q06686 241 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-BRQ12217 440 aa7.52□□□□□ -1.21
SEC61YLR378C POM34Q12445 299 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-NL2Q12470 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-GR2Q12485 440 aa7.52□□□□□ -1.21
SEC61YLR378C ADE8P04161 214 aa7.51□□□□□ -1.21
SEC61YLR378C ADH3P07246 375 aaKnown RBP7.51□□□□□ -1.21
SEC61YLR378C TOM40P23644 387 aaKnown RBP7.51□□□□□ -1.21
SEC61YLR378C DAL3P32459 195 aa7.51□□□□□ -1.21
SEC61YLR378C ALK2P32789 676 aaPredicted RBP7.51□□□□□ -1.21
SEC61YLR378C BNA1P47096 177 aa7.51□□□□□ -1.21
SEC61YLR378C MOG1P47123 218 aa7.51□□□□□ -1.21
SEC61YLR378C TIM21P53220 239 aa7.51□□□□□ -1.21
SEC61YLR378C YMR007WQ03675 126 aa7.51□□□□□ -1.21
SEC61YLR378C LRS4Q04087 347 aaKnown RBP7.51□□□□□ -1.21
SEC61YLR378C SHH3Q04487 196 aa7.51□□□□□ -1.21
SEC61YLR378C AVO2Q04749 426 aa7.51□□□□□ -1.21
SEC61YLR378C NDE2Q07500 545 aa7.51□□□□□ -1.21
SEC61YLR378C RAD28Q12021 506 aa7.51□□□□□ -1.21
SEC61YLR378C ISU2Q12056 156 aa7.51□□□□□ -1.21
SEC61YLR378C RDL1Q12305 139 aaKnown RBP7.51□□□□□ -1.21
SEC61YLR378C GEP5Q12393 293 aa7.51□□□□□ -1.21
SEC61YLR378C DER1P38307 211 aa7.5□□□□□ -1.21
SEC61YLR378C PTC7P38797 343 aa7.5□□□□□ -1.21
SEC61YLR378C SUT1P53032 299 aaKnown RBP7.5□□□□□ -1.21
SEC61YLR378C YGR151CP53287 111 aa7.5□□□□□ -1.21
SEC61YLR378C ATC1Q04005 294 aa7.5□□□□□ -1.21
SEC61YLR378C JID1Q12350 301 aa7.5□□□□□ -1.21
SEC61YLR378C PAA1Q12447 191 aaKnown RBP7.5□□□□□ -1.21
SEC61YLR378C TRA1P38811 3744 aa7.5□□□□□ -1.21
SEC61YLR378C PRP8P33334 2413 aaKnown RBP7.49□□□□□ -1.21
SEC61YLR378C LAC1P28496 418 aa7.49□□□□□ -1.21
SEC61YLR378C GZF3P42944 551 aaKnown RBP7.49□□□□□ -1.21
SEC61YLR378C YFL054CP43549 646 aa7.49□□□□□ -1.21
SEC61YLR378C POS5Q06892 414 aa7.49□□□□□ -1.21
SEC61YLR378C ATG8P38182 117 aaRIP-Chip data7.48□□□□□ -1.21not detected
SEC61YLR378C PRE3P38624 215 aa7.48□□□□□ -1.21
SEC61YLR378C PHS1P40857 217 aa7.48□□□□□ -1.21
SEC61YLR378C SAS2P40963 338 aa7.48□□□□□ -1.21
SEC61YLR378C LST8P41318 303 aa7.48□□□□□ -1.21
SEC61YLR378C HAM1P47119 197 aaKnown RBP7.48□□□□□ -1.21
SEC61YLR378C YHP1Q04116 353 aa7.48□□□□□ -1.21
SEC61YLR378C ATO3Q12359 275 aa7.48□□□□□ -1.21
SEC61YLR378C ILV5P06168 395 aaKnown RBP7.47□□□□□ -1.21
SEC61YLR378C PIS1P06197 220 aaKnown RBP7.47□□□□□ -1.21
SEC61YLR378C YBL071CP38185 102 aa7.47□□□□□ -1.21
SEC61YLR378C TRS20P38334 175 aa7.47□□□□□ -1.21
SEC61YLR378C YPT31P38555 223 aaKnown RBP7.47□□□□□ -1.21
SEC61YLR378C TAX4P47030 604 aa7.47□□□□□ -1.21
SEC61YLR378C Q0297Q9ZZV8 51 aa7.47□□□□□ -1.21
SEC61YLR378C DFR1P07807 211 aaKnown RBP RIP-Chip data7.46□□□□□ -1.21not detected
SEC61YLR378C TY1A-LR4P0C2I8 440 aaKnown RBP7.46□□□□□ -1.21
SEC61YLR378C TY1A-DR6P0CX70 440 aa7.46□□□□□ -1.21
SEC61YLR378C TY1A-ER1P0CX71 440 aa7.46□□□□□ -1.21
SEC61YLR378C TY1A-LR2P0CX72 440 aa7.46□□□□□ -1.21
SEC61YLR378C TY1A-PLP0CX73 440 aa7.46□□□□□ -1.21
SEC61YLR378C TY1A-JR1P0CX74 440 aa7.46□□□□□ -1.21
SEC61YLR378C TY1A-LR3P0CX75 440 aa7.46□□□□□ -1.21
SEC61YLR378C TY1A-ML2P0CX76 440 aa7.46□□□□□ -1.21
SEC61YLR378C VMA11P32842 164 aa7.46□□□□□ -1.21
SEC61YLR378C MRPS9P38120 278 aa7.46□□□□□ -1.21
SEC61YLR378C YAR068WP39564 161 aa7.46□□□□□ -1.21
SEC61YLR378C VMA21P41806 77 aa7.46□□□□□ -1.21
SEC61YLR378C LOC1P43586 204 aaPredicted RBP7.46□□□□□ -1.21
SEC61YLR378C YJL163CP46996 555 aa7.46□□□□□ -1.21
SEC61YLR378C YNL234WP53857 426 aa7.46□□□□□ -1.21
SEC61YLR378C TY1A-GR1Q12085 440 aa7.46□□□□□ -1.21
SEC61YLR378C ATP16Q12165 160 aa7.46□□□□□ -1.21
SEC61YLR378C RKI1Q12189 258 aa7.46□□□□□ -1.21
SEC61YLR378C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.46□□□□□ -1.21
SEC61YLR378C TY1A-OLQ92392 440 aaKnown RBP7.46□□□□□ -1.21
SEC61YLR378C YMR316C-AI2HB70 103 aa7.45□□□□□ -1.22
SEC61YLR378C HMX1P32339 317 aa7.45□□□□□ -1.22
SEC61YLR378C GTT1P40582 234 aa7.45□□□□□ -1.22
SEC61YLR378C LST7P53237 242 aa7.45□□□□□ -1.22
SEC61YLR378C MCH1Q07376 486 aa7.45□□□□□ -1.22
SEC61YLR378C FCY1Q12178 158 aa7.45□□□□□ -1.22
SEC61YLR378C ERV2Q12284 196 aa7.45□□□□□ -1.22
SEC61YLR378C YPR145C-AQ2V2P0 78 aa7.45□□□□□ -1.22
SEC61YLR378C SOD1P00445 154 aaKnown RBP7.44□□□□□ -1.22
SEC61YLR378C RPS22AP0C0W1 130 aaKnown RBP7.44□□□□□ -1.22
SEC61YLR378C RPB3P16370 318 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms