RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C YNL194CP40169 301 aa2.89□□□□□ -1.95
OTU1YFL044C RFC2P40348 353 aa2.89□□□□□ -1.95
OTU1YFL044C WWM1P43582 211 aaKnown RBP2.89□□□□□ -1.95
OTU1YFL044C BXI1P48558 297 aa2.89□□□□□ -1.95
OTU1YFL044C ACT1P60010 375 aaKnown RBP2.89□□□□□ -1.95
OTU1YFL044C RTT103Q05543 409 aa2.89□□□□□ -1.95
OTU1YFL044C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
OTU1YFL044C PPT2Q12036 173 aa2.89□□□□□ -1.95
OTU1YFL044C YLR099W-AQ3E798 87 aa2.89□□□□□ -1.95
OTU1YFL044C MED11Q99278 115 aa2.89□□□□□ -1.95
OTU1YFL044C HIS3P06633 220 aa2.88□□□□□ -1.95
OTU1YFL044C YMR31P19955 123 aa2.88□□□□□ -1.95
OTU1YFL044C POP5P28005 173 aa2.88□□□□□ -1.95
OTU1YFL044C AGA1P32323 725 aa2.88□□□□□ -1.95
OTU1YFL044C HYM1P32464 399 aa2.88□□□□□ -1.95
OTU1YFL044C YBL010CP32788 280 aa2.88□□□□□ -1.95
OTU1YFL044C RPB7P34087 171 aa2.88□□□□□ -1.95
OTU1YFL044C SRL3P36167 246 aa2.88□□□□□ -1.95
OTU1YFL044C MPC2P38857 129 aa2.88□□□□□ -1.95
OTU1YFL044C MSS2P40990 351 aa2.88□□□□□ -1.95
OTU1YFL044C PAM16P42949 149 aa2.88□□□□□ -1.95
OTU1YFL044C LCB3P47013 409 aa2.88□□□□□ -1.95
OTU1YFL044C GPI14P47088 403 aaKnown RBP2.88□□□□□ -1.95
OTU1YFL044C YAE1P47118 141 aaPredicted RBP2.88□□□□□ -1.95
OTU1YFL044C AIM24P47127 394 aa2.88□□□□□ -1.95
OTU1YFL044C DOC1P53068 250 aa2.88□□□□□ -1.95
OTU1YFL044C TOS8P53147 276 aa2.88□□□□□ -1.95
OTU1YFL044C CTF19Q02732 369 aa2.88□□□□□ -1.95
OTU1YFL044C LPP1Q04396 274 aa2.88□□□□□ -1.95
OTU1YFL044C GRH1Q04410 372 aaKnown RBP2.88□□□□□ -1.95
OTU1YFL044C MCH1Q07376 486 aa2.88□□□□□ -1.95
OTU1YFL044C YOL118CQ08259 102 aa2.88□□□□□ -1.95
OTU1YFL044C YOR292CQ08743 309 aa2.88□□□□□ -1.95
OTU1YFL044C YOS1Q3E834 85 aa2.88□□□□□ -1.95
OTU1YFL044C YLR365WQ7LIF2 110 aa2.88□□□□□ -1.95
OTU1YFL044C UBA3Q99344 299 aa2.88□□□□□ -1.95
OTU1YFL044C YEL009C-AA0A023PZF2 135 aa2.87□□□□□ -1.95
OTU1YFL044C TRP1P00912 224 aa2.87□□□□□ -1.95
OTU1YFL044C RPL9AP05738 191 aaKnown RBP2.87□□□□□ -1.95
OTU1YFL044C PET494P07390 489 aaPredicted RBP2.87□□□□□ -1.95
OTU1YFL044C PDC2P32896 925 aa2.87□□□□□ -1.95
OTU1YFL044C SHE2P36068 246 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
OTU1YFL044C YKR045CP36138 183 aa2.87□□□□□ -1.95
OTU1YFL044C FCY21P40039 528 aa2.87□□□□□ -1.95
OTU1YFL044C COX15P40086 486 aa2.87□□□□□ -1.95
OTU1YFL044C YFL067WP43537 175 aa2.87□□□□□ -1.95
OTU1YFL044C RBL2P48606 106 aaKnown RBP2.87□□□□□ -1.95
OTU1YFL044C SLX9P53251 210 aaPredicted RBP2.87□□□□□ -1.95
OTU1YFL044C YGR219WP53307 113 aa2.87□□□□□ -1.95
OTU1YFL044C ALG9P53868 555 aaKnown RBP2.87□□□□□ -1.95
OTU1YFL044C YDR274CP87283 123 aa2.87□□□□□ -1.95
OTU1YFL044C YPL080CQ02826 108 aa2.87□□□□□ -1.95
OTU1YFL044C NDE2Q07500 545 aa2.87□□□□□ -1.95
OTU1YFL044C HTZ1Q12692 134 aaKnown RBP2.87□□□□□ -1.95
OTU1YFL044C YPR108W-AQ3E7B3 70 aa2.87□□□□□ -1.95
OTU1YFL044C PIS1P06197 220 aaKnown RBP2.86□□□□□ -1.95
OTU1YFL044C ROX3P25046 220 aa2.86□□□□□ -1.95
OTU1YFL044C CPR4P25334 318 aa2.86□□□□□ -1.95
OTU1YFL044C ACB1P31787 87 aa2.86□□□□□ -1.95
OTU1YFL044C AGA2P32781 87 aa2.86□□□□□ -1.95
OTU1YFL044C AVT5P38176 459 aa2.86□□□□□ -1.95
OTU1YFL044C PET100P38958 111 aa2.86□□□□□ -1.95
OTU1YFL044C MRPL49P40858 161 aaPredicted RBP2.86□□□□□ -1.95
OTU1YFL044C YGR210CP42942 411 aa2.86□□□□□ -1.95
OTU1YFL044C COX16P47081 118 aa2.86□□□□□ -1.95
OTU1YFL044C YJR012CP47087 207 aa2.86□□□□□ -1.95
OTU1YFL044C ILM1P47155 203 aa2.86□□□□□ -1.95
OTU1YFL044C FMP48P53233 369 aa2.86□□□□□ -1.95
OTU1YFL044C CRH1P53301 507 aa2.86□□□□□ -1.95
OTU1YFL044C MSO1P53604 210 aaKnown RBP2.86□□□□□ -1.95
OTU1YFL044C RBD2Q12270 262 aa2.86□□□□□ -1.95
OTU1YFL044C BOL1Q3E793 110 aa2.86□□□□□ -1.95
OTU1YFL044C SAL1D6W196 494 aa2.85□□□□□ -1.95
OTU1YFL044C URA6P15700 204 aa2.85□□□□□ -1.95
OTU1YFL044C ZRT1P32804 376 aa2.85□□□□□ -1.95
OTU1YFL044C MIC12P38341 106 aa2.85□□□□□ -1.95
OTU1YFL044C YJL218WP40892 196 aaKnown RBP2.85□□□□□ -1.95
OTU1YFL044C YFR035CP43608 114 aa2.85□□□□□ -1.95
OTU1YFL044C SNX4P47057 423 aa2.85□□□□□ -1.95
OTU1YFL044C BUD25P85052 153 aa2.85□□□□□ -1.95
OTU1YFL044C HRD1Q08109 551 aa2.85□□□□□ -1.95
OTU1YFL044C YNG1Q08465 219 aa2.85□□□□□ -1.95
OTU1YFL044C ODC2Q99297 307 aa2.85□□□□□ -1.95
OTU1YFL044C HTB1P02293 131 aaKnown RBP2.84□□□□□ -1.95
OTU1YFL044C ALK2P32789 676 aaPredicted RBP2.84□□□□□ -1.95
OTU1YFL044C GOS1P38736 223 aa2.84□□□□□ -1.95
OTU1YFL044C YHR138CP38841 114 aaPredicted RBP2.84□□□□□ -1.95
OTU1YFL044C DFG10P40526 253 aa2.84□□□□□ -1.95
OTU1YFL044C YJR085CP47131 105 aaKnown RBP2.84□□□□□ -1.95
OTU1YFL044C TIM21P53220 239 aa2.84□□□□□ -1.95
OTU1YFL044C VHT1P53241 593 aa2.84□□□□□ -1.95
OTU1YFL044C YML108WQ03759 105 aa2.84□□□□□ -1.95
OTU1YFL044C GPN3Q06543 272 aa2.84□□□□□ -1.95
OTU1YFL044C ATG41Q12048 136 aa2.84□□□□□ -1.95
OTU1YFL044C TIR4Q12218 487 aaPredicted RBP2.84□□□□□ -1.95
OTU1YFL044C YMR230W-AQ3E7B5 62 aa2.84□□□□□ -1.95
OTU1YFL044C YBR298C-AQ8TGK4 73 aa2.84□□□□□ -1.95
OTU1YFL044C YCL021W-AQ96VH3 125 aa2.84□□□□□ -1.95
OTU1YFL044C ADH2P00331 348 aaKnown RBP2.83□□□□□ -1.96
OTU1YFL044C RPL23AP0CX41 137 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms