RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C GRE1Q08969 168 aa2.24□□□□□ -2.05
LSM6YDR378C GSP2P32836 220 aaKnown RBP2.23□□□□□ -2.05
LSM6YDR378C NVJ1P38881 321 aa2.23□□□□□ -2.05
LSM6YDR378C SBH1P52870 82 aa2.23□□□□□ -2.05
LSM6YDR378C HPT1Q04178 221 aaKnown RBP2.23□□□□□ -2.05
LSM6YDR378C ARO7P32178 256 aa2.22□□□□□ -2.05
LSM6YDR378C YHL042WP38729 150 aa2.22□□□□□ -2.05
LSM6YDR378C THG1P53215 237 aaKnown RBP2.22□□□□□ -2.05
LSM6YDR378C FIT2Q08906 153 aa2.22□□□□□ -2.05
LSM6YDR378C DGK1Q12382 290 aa2.22□□□□□ -2.05
LSM6YDR378C CLG1P35190 452 aa2.21□□□□□ -2.06
LSM6YDR378C SRP14P38985 146 aa2.21□□□□□ -2.06
LSM6YDR378C HPA3P39979 161 aa2.21□□□□□ -2.06
LSM6YDR378C RFC2P40348 353 aa2.21□□□□□ -2.06
LSM6YDR378C JAC1P53193 184 aa2.21□□□□□ -2.06
LSM6YDR378C GRX5Q02784 150 aa2.21□□□□□ -2.06
LSM6YDR378C STP22P25604 385 aa2.2□□□□□ -2.06
LSM6YDR378C YFH7P43591 353 aa2.2□□□□□ -2.06
LSM6YDR378C YIP3P53633 176 aa2.2□□□□□ -2.06
LSM6YDR378C FYV12Q08559 129 aa2.2□□□□□ -2.06
LSM6YDR378C ATP20Q12233 115 aa2.2□□□□□ -2.06
LSM6YDR378C PEX11Q12462 236 aa2.2□□□□□ -2.06
LSM6YDR378C CHD1P32657 1468 aa2.2□□□□□ -2.06
LSM6YDR378C ALB1P47019 175 aaPredicted RBP2.19□□□□□ -2.06
LSM6YDR378C DAS2Q12084 232 aa2.19□□□□□ -2.06
LSM6YDR378C SPA2P23201 1466 aaKnown RBP2.19□□□□□ -2.06
LSM6YDR378C VAR1P02381 398 aa2.18□□□□□ -2.06
LSM6YDR378C YCR023CP25351 611 aa2.18□□□□□ -2.06
LSM6YDR378C RPB7P34087 171 aa2.18□□□□□ -2.06
LSM6YDR378C YLR460CP54007 376 aa2.18□□□□□ -2.06
LSM6YDR378C PIR1Q03178 341 aa2.18□□□□□ -2.06
LSM6YDR378C PLP1Q04004 230 aa2.18□□□□□ -2.06
LSM6YDR378C UPS3Q04006 179 aa2.18□□□□□ -2.06
LSM6YDR378C MAK5P38112 773 aaPredicted RBP2.17□□□□□ -2.06
LSM6YDR378C YFL065CP43539 102 aa2.17□□□□□ -2.06
LSM6YDR378C YOR015WQ12169 119 aa2.17□□□□□ -2.06
LSM6YDR378C ACC1Q00955 2233 aaKnown RBP2.17□□□□□ -2.06
LSM6YDR378C TIM13P53299 105 aa2.16□□□□□ -2.06
LSM6YDR378C VPS28Q02767 242 aa2.16□□□□□ -2.06
LSM6YDR378C GAL83Q04739 417 aa2.16□□□□□ -2.06
LSM6YDR378C YMR252CQ04814 134 aa2.16□□□□□ -2.06
LSM6YDR378C RAD51P25454 400 aa2.15□□□□□ -2.07
LSM6YDR378C RRT1P38192 103 aa2.15□□□□□ -2.07
LSM6YDR378C YLR050CQ12155 161 aaKnown RBP2.15□□□□□ -2.07
LSM6YDR378C HSP30P25619 332 aa2.14□□□□□ -2.07
LSM6YDR378C VPS51P36116 164 aa2.14□□□□□ -2.07
LSM6YDR378C SOK1P40317 901 aa2.14□□□□□ -2.07
LSM6YDR378C TTI2P47168 421 aa2.14□□□□□ -2.07
LSM6YDR378C RRP17Q04031 235 aaPredicted RBP2.14□□□□□ -2.07
LSM6YDR378C YOR214CQ12282 236 aa2.14□□□□□ -2.07
LSM6YDR378C GIM5Q04493 163 aa2.13□□□□□ -2.07
LSM6YDR378C RPL35AP0CX84 120 aaKnown RBP2.12□□□□□ -2.07
LSM6YDR378C RPL35BP0CX85 120 aaKnown RBP2.12□□□□□ -2.07
LSM6YDR378C YEL067CP39978 195 aa2.12□□□□□ -2.07
LSM6YDR378C XPT1P47165 209 aa2.12□□□□□ -2.07
LSM6YDR378C YPR127WQ06494 345 aa2.12□□□□□ -2.07
LSM6YDR378C AQY2P0CD90 149 aa2.11□□□□□ -2.07
LSM6YDR378C YEL008WP40001 126 aa2.11□□□□□ -2.07
LSM6YDR378C YNL140CP53910 189 aa2.11□□□□□ -2.07
LSM6YDR378C YKR005CQ02203 525 aa2.11□□□□□ -2.07
LSM6YDR378C CMD1P06787 147 aaKnown RBP2.1□□□□□ -2.07
LSM6YDR378C STF2P16965 84 aa2.1□□□□□ -2.07
LSM6YDR378C CPR5P35176 225 aa2.1□□□□□ -2.07
LSM6YDR378C FYV4P38783 130 aaPredicted RBP2.1□□□□□ -2.07
LSM6YDR378C SOL1P50278 321 aa2.1□□□□□ -2.07
LSM6YDR378C DML1Q03652 475 aa2.1□□□□□ -2.07
LSM6YDR378C YHR212W-AP0CX91 67 aa2.09□□□□□ -2.07
LSM6YDR378C YCL042WP25572 119 aa2.09□□□□□ -2.07
LSM6YDR378C YNL200CP40165 246 aaKnown RBP2.09□□□□□ -2.07
LSM6YDR378C YGL235WP53071 178 aa2.09□□□□□ -2.07
LSM6YDR378C UPS1Q05776 175 aa2.09□□□□□ -2.07
LSM6YDR378C RAD6P06104 172 aa2.08□□□□□ -2.08
LSM6YDR378C NSE4P43124 402 aa2.08□□□□□ -2.08
LSM6YDR378C MET31Q03081 177 aa2.08□□□□□ -2.08
LSM6YDR378C YHP1Q04116 353 aa2.08□□□□□ -2.08
LSM6YDR378C ATG41Q12048 136 aa2.08□□□□□ -2.08
LSM6YDR378C PST2Q12335 198 aaKnown RBP2.08□□□□□ -2.08
LSM6YDR378C CMC2Q3E7A4 109 aa2.08□□□□□ -2.08
LSM6YDR378C GLR1P41921 483 aaKnown RBP2.07□□□□□ -2.08
LSM6YDR378C SEN2P16658 377 aa2.06□□□□□ -2.08
LSM6YDR378C NUF2P33895 451 aa2.06□□□□□ -2.08
LSM6YDR378C MPM1P40364 252 aa2.06□□□□□ -2.08
LSM6YDR378C SBH2P52871 88 aa2.06□□□□□ -2.08
LSM6YDR378C YMR007WQ03675 126 aa2.06□□□□□ -2.08
LSM6YDR378C RIM9Q04734 239 aa2.06□□□□□ -2.08
LSM6YDR378C YMR030W-AQ3E760 96 aa2.06□□□□□ -2.08
LSM6YDR378C COA3Q3E7B2 85 aa2.06□□□□□ -2.08
LSM6YDR378C YOR381W-AQ3E804 55 aa2.06□□□□□ -2.08
LSM6YDR378C SWR1Q05471 1514 aa2.06□□□□□ -2.08
LSM6YDR378C YLR422WQ06409 1932 aa2.05□□□□□ -2.08
LSM6YDR378C MAK31P23059 88 aa2.05□□□□□ -2.08
LSM6YDR378C YBL010CP32788 280 aa2.05□□□□□ -2.08
LSM6YDR378C YRA2P36036 203 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
LSM6YDR378C KOG1P38873 1557 aa2.04□□□□□ -2.08
LSM6YDR378C TMA20P89886 181 aaPredicted RBP2.04□□□□□ -2.08
LSM6YDR378C TRM3Q07527 1436 aa2.03□□□□□ -2.08
LSM6YDR378C CSH1P38287 376 aa2.03□□□□□ -2.08
LSM6YDR378C CCS1P40202 249 aaKnown RBP2.03□□□□□ -2.08
LSM6YDR378C HHT1P61830 136 aa2.03□□□□□ -2.08
LSM6YDR378C TLG1Q03322 224 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms