RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C YET1P35723 206 aa2.53□□□□□ -2.01
YPK3YBR028C YBR285WP38354 144 aa2.53□□□□□ -2.01
YPK3YBR028C YNL217WP40152 326 aa2.53□□□□□ -2.01
YPK3YBR028C YGL101WP53144 215 aa2.53□□□□□ -2.01
YPK3YBR028C SDH7Q04401 133 aa2.53□□□□□ -2.01
YPK3YBR028C SML1Q04964 104 aa2.53□□□□□ -2.01
YPK3YBR028C YPR014CQ6B0W2 109 aa2.53□□□□□ -2.01
YPK3YBR028C SNT2P53127 1403 aa2.52□□□□□ -2.01
YPK3YBR028C MBF1O14467 151 aaKnown RBP2.52□□□□□ -2.01
YPK3YBR028C UBI4P0CG63 381 aaKnown RBP2.52□□□□□ -2.01
YPK3YBR028C RPL2AP0CX45 254 aaKnown RBP2.52□□□□□ -2.01
YPK3YBR028C RPL2BP0CX46 254 aaKnown RBP2.52□□□□□ -2.01
YPK3YBR028C YEA4P40004 342 aa2.52□□□□□ -2.01
YPK3YBR028C HPM1P40481 377 aa2.52□□□□□ -2.01
YPK3YBR028C APQ12P40532 138 aa2.52□□□□□ -2.01
YPK3YBR028C BAT2P47176 376 aaKnown RBP2.52□□□□□ -2.01
YPK3YBR028C ARL3Q02804 198 aa2.52□□□□□ -2.01
YPK3YBR028C FSF1Q12029 327 aaKnown RBP2.52□□□□□ -2.01
YPK3YBR028C MPD1Q12404 318 aaKnown RBP2.52□□□□□ -2.01
YPK3YBR028C FZF1P32805 299 aa2.51□□□□□ -2.01
YPK3YBR028C SNC2P33328 115 aa2.51□□□□□ -2.01
YPK3YBR028C SFK1P35735 353 aa2.51□□□□□ -2.01
YPK3YBR028C EAF6P47128 113 aa2.51□□□□□ -2.01
YPK3YBR028C ARO8P53090 500 aaKnown RBP2.51□□□□□ -2.01
YPK3YBR028C TIM13P53299 105 aa2.51□□□□□ -2.01
YPK3YBR028C LSM3P57743 89 aaKnown RBP2.51□□□□□ -2.01
YPK3YBR028C YDR274CP87283 123 aa2.51□□□□□ -2.01
YPK3YBR028C PRP11Q07350 266 aaPredicted RBP2.51□□□□□ -2.01
YPK3YBR028C ATP14Q12349 124 aa2.51□□□□□ -2.01
YPK3YBR028C TOP2P06786 1428 aaKnown RBP2.51□□□□□ -2.01
YPK3YBR028C CNB1P25296 175 aa2.5□□□□□ -2.01
YPK3YBR028C TFC1P32367 649 aa2.5□□□□□ -2.01
YPK3YBR028C MRPL24P36525 258 aaPredicted RBP2.5□□□□□ -2.01
YPK3YBR028C FMP23P38231 175 aa2.5□□□□□ -2.01
YPK3YBR028C AVT2P39981 480 aa2.5□□□□□ -2.01
YPK3YBR028C GPI14P47088 403 aaKnown RBP2.5□□□□□ -2.01
YPK3YBR028C PGA1P53896 198 aa2.5□□□□□ -2.01
YPK3YBR028C TIM8P57744 87 aa2.5□□□□□ -2.01
YPK3YBR028C CKS1P20486 150 aaKnown RBP2.49□□□□□ -2.01
YPK3YBR028C SPO13P23624 291 aa2.49□□□□□ -2.01
YPK3YBR028C VTC1P40046 129 aaRIP-Chip data2.49□□□□□ -2.01not detected
YPK3YBR028C ARP3P47117 449 aaKnown RBP2.49□□□□□ -2.01
YPK3YBR028C SOL1P50278 321 aa2.49□□□□□ -2.01
YPK3YBR028C FMN1Q03778 218 aa2.49□□□□□ -2.01
YPK3YBR028C YMR320WQ04897 101 aa2.49□□□□□ -2.01
YPK3YBR028C HRD1Q08109 551 aa2.49□□□□□ -2.01
YPK3YBR028C YIR021W-AQ3E739 70 aa2.49□□□□□ -2.01
YPK3YBR028C YOR304C-AO14468 76 aa2.49□□□□□ -2.01
YPK3YBR028C CPA1P07258 411 aaKnown RBP2.49□□□□□ -2.01
YPK3YBR028C STP22P25604 385 aa2.49□□□□□ -2.01
YPK3YBR028C RPC19P28000 142 aaKnown RBP2.49□□□□□ -2.01
YPK3YBR028C GSP1P32835 219 aaKnown RBP2.49□□□□□ -2.01
YPK3YBR028C GSP2P32836 220 aaKnown RBP2.49□□□□□ -2.01
YPK3YBR028C VMA7P39111 118 aa2.49□□□□□ -2.01
YPK3YBR028C RGI1P40043 161 aaPredicted RBP2.49□□□□□ -2.01
YPK3YBR028C GLC8P41818 229 aa2.49□□□□□ -2.01
YPK3YBR028C YFR054CP43622 192 aa2.49□□□□□ -2.01
YPK3YBR028C HHO1P53551 258 aa2.49□□□□□ -2.01
YPK3YBR028C COF1Q03048 143 aaKnown RBP2.49□□□□□ -2.01
YPK3YBR028C NKP2Q06162 153 aa2.49□□□□□ -2.01
YPK3YBR028C RPS20P38701 121 aaKnown RBP2.48□□□□□ -2.01
YPK3YBR028C GAA1P39012 614 aa2.48□□□□□ -2.01
YPK3YBR028C AIM2P39721 246 aa2.48□□□□□ -2.01
YPK3YBR028C YPL073CP40323 161 aa2.48□□□□□ -2.01
YPK3YBR028C RFC2P40348 353 aa2.48□□□□□ -2.01
YPK3YBR028C DLS1P40366 167 aa2.48□□□□□ -2.01
YPK3YBR028C ERJ5P43613 295 aaPredicted RBP2.48□□□□□ -2.01
YPK3YBR028C BUD25P85052 153 aa2.48□□□□□ -2.01
YPK3YBR028C YDR366CP87287 132 aa2.48□□□□□ -2.01
YPK3YBR028C YPL225WQ08971 146 aaKnown RBP2.48□□□□□ -2.01
YPK3YBR028C DAS2Q12084 232 aa2.48□□□□□ -2.01
YPK3YBR028C RPL30P14120 105 aaKnown RBP2.47□□□□□ -2.01
YPK3YBR028C RPS1BP23248 255 aaKnown RBP2.47□□□□□ -2.01
YPK3YBR028C APS2Q00381 147 aa2.47□□□□□ -2.01
YPK3YBR028C THI74Q04083 370 aa2.47□□□□□ -2.01
YPK3YBR028C CNL1Q06333 122 aa2.47□□□□□ -2.01
YPK3YBR028C LDB18Q07887 179 aa2.47□□□□□ -2.01
YPK3YBR028C YDL180WQ12301 547 aa2.47□□□□□ -2.01
YPK3YBR028C SHE2P36068 246 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
YPK3YBR028C OPY1P38271 328 aa2.46□□□□□ -2.02
YPK3YBR028C YBR219CP38317 127 aa2.46□□□□□ -2.02
YPK3YBR028C XPT1P47165 209 aa2.46□□□□□ -2.02
YPK3YBR028C ORM1P53224 222 aa2.46□□□□□ -2.02
YPK3YBR028C YGR039WP53225 103 aa2.46□□□□□ -2.02
YPK3YBR028C RUB1Q03919 77 aa2.46□□□□□ -2.02
YPK3YBR028C YOR342CQ12182 319 aa2.46□□□□□ -2.02
YPK3YBR028C MRP49P32388 137 aa2.45□□□□□ -2.02
YPK3YBR028C PAN3P36102 679 aaPredicted RBP2.45□□□□□ -2.02
YPK3YBR028C YER135CP40082 130 aa2.45□□□□□ -2.02
YPK3YBR028C FCY1Q12178 158 aa2.45□□□□□ -2.02
YPK3YBR028C FYV7Q12247 151 aa2.45□□□□□ -2.02
YPK3YBR028C ATG40Q99325 256 aa2.45□□□□□ -2.02
YPK3YBR028C YCR101CP25607 182 aa2.44□□□□□ -2.02
YPK3YBR028C UGX2P32772 223 aa2.44□□□□□ -2.02
YPK3YBR028C CSH1P38287 376 aa2.44□□□□□ -2.02
YPK3YBR028C GLR1P41921 483 aaKnown RBP2.44□□□□□ -2.02
YPK3YBR028C SKI6P46948 246 aaPredicted RBP2.44□□□□□ -2.02
YPK3YBR028C TTI2P47168 421 aa2.44□□□□□ -2.02
YPK3YBR028C CWC27Q02770 301 aa2.44□□□□□ -2.02
YPK3YBR028C DIG2Q03373 323 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms