RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 BUB2P26448 306 aaPredicted RBP-2.15□□□□□ -2.75
snR38snR38 SWE1P32944 819 aa-2.15□□□□□ -2.75
snR38snR38 YBR027CP38220 110 aa-2.15□□□□□ -2.75
snR38snR38 YHR127WP38833 243 aaKnown RBP-2.15□□□□□ -2.75
snR38snR38 YNL190WP53872 204 aa-2.15□□□□□ -2.75
snR38snR38 ADF1Q2V2Q1 113 aa-2.15□□□□□ -2.75
snR38snR38 CDC39P25655 2108 aaKnown RBP-2.15□□□□□ -2.75
snR38snR38 IKI3Q06706 1349 aaKnown RBP-2.16□□□□□ -2.75
snR38snR38 SHH3Q04487 196 aa-2.16□□□□□ -2.76
snR38snR38 RRG8Q06109 277 aa-2.16□□□□□ -2.76
snR38snR38 SNU23Q12368 194 aaPredicted RBP-2.16□□□□□ -2.76
snR38snR38 RRP36Q12481 300 aaPredicted RBP-2.16□□□□□ -2.76
snR38snR38 TDA8Q6B2U8 126 aa-2.16□□□□□ -2.76
snR38snR38 SRB4P32569 687 aa-2.17□□□□□ -2.76
snR38snR38 SEC17P32602 292 aa-2.17□□□□□ -2.76
snR38snR38 GAT4P40569 121 aa-2.17□□□□□ -2.76
snR38snR38 IRC21Q04772 201 aa-2.17□□□□□ -2.76
snR38snR38 REX3Q12090 404 aa-2.17□□□□□ -2.76
snR38snR38 YOR015WQ12169 119 aa-2.17□□□□□ -2.76
snR38snR38 ATP15P21306 62 aa-2.18□□□□□ -2.76
snR38snR38 MAK31P23059 88 aa-2.18□□□□□ -2.76
snR38snR38 AUA1P32450 94 aa-2.18□□□□□ -2.76
snR38snR38 SSO2P39926 295 aa-2.18□□□□□ -2.76
snR38snR38 PDR16P53860 351 aaKnown RBP-2.18□□□□□ -2.76
snR38snR38 YNL033WP53964 284 aa-2.18□□□□□ -2.76
snR38snR38 PIR1Q03178 341 aa-2.18□□□□□ -2.76
snR38snR38 YLR194CQ05777 254 aa-2.18□□□□□ -2.76
snR38snR38 CUR1Q06469 252 aa-2.18□□□□□ -2.76
snR38snR38 YDL121CQ07541 149 aa-2.18□□□□□ -2.76
snR38snR38 BRX1Q08235 291 aaKnown RBP-2.18□□□□□ -2.76
snR38snR38 CKS1P20486 150 aaKnown RBP-2.19□□□□□ -2.76
snR38snR38 MRPL24P36525 258 aaPredicted RBP-2.19□□□□□ -2.76
snR38snR38 PET100P38958 111 aa-2.19□□□□□ -2.76
snR38snR38 SMB1P40018 196 aaKnown RBP-2.19□□□□□ -2.76
snR38snR38 USE1P53146 245 aa-2.19□□□□□ -2.76
snR38snR38 YDR209CQ03480 137 aa-2.19□□□□□ -2.76
snR38snR38 KSS1P14681 368 aa-2.2□□□□□ -2.76
snR38snR38 RPB3P16370 318 aaKnown RBP-2.2□□□□□ -2.76
snR38snR38 VMA8P32610 256 aaKnown RBP-2.2□□□□□ -2.76
snR38snR38 PTM1P32857 523 aa-2.2□□□□□ -2.76
snR38snR38 UTP30P36144 274 aaKnown RBP-2.2□□□□□ -2.76
snR38snR38 COA1P40452 197 aa-2.2□□□□□ -2.76
snR38snR38 YDR249CQ03787 373 aa-2.2□□□□□ -2.76
snR38snR38 YHP1Q04116 353 aa-2.2□□□□□ -2.76
snR38snR38 FIT3Q08907 204 aa-2.2□□□□□ -2.76
snR38snR38 YPL229WQ99395 206 aa-2.2□□□□□ -2.76
snR38snR38 ECM31P38122 312 aa-2.21□□□□□ -2.76
snR38snR38 YBR096WP38256 230 aa-2.21□□□□□ -2.76
snR38snR38 PRS2P38620 318 aaKnown RBP-2.21□□□□□ -2.76
snR38snR38 LRP1P38801 184 aaKnown RBP-2.21□□□□□ -2.76
snR38snR38 BFR1P38934 470 aaKnown RBP RIP-Chip data-2.21□□□□□ -2.76not detected
snR38snR38 POR2P40478 281 aa-2.21□□□□□ -2.76
snR38snR38 RTC4P53850 401 aa-2.21□□□□□ -2.76
snR38snR38 GRX5Q02784 150 aa-2.21□□□□□ -2.76
snR38snR38 BTS1Q12051 335 aa-2.21□□□□□ -2.76
snR38snR38 YOL107WQ12239 342 aa-2.21□□□□□ -2.76
snR38snR38 RSF2P46974 1380 aa-2.22□□□□□ -2.76
snR38snR38 TAF2P23255 1407 aa-2.22□□□□□ -2.76
snR38snR38 IPI1P38803 334 aaPredicted RBP-2.22□□□□□ -2.76
snR38snR38 GPI14P47088 403 aaKnown RBP-2.22□□□□□ -2.76
snR38snR38 SGF11Q03067 99 aa-2.22□□□□□ -2.76
snR38snR38 OST6Q03723 332 aa-2.22□□□□□ -2.76
snR38snR38 AVO2Q04749 426 aa-2.22□□□□□ -2.76
snR38snR38 CDC123Q05791 360 aa-2.22□□□□□ -2.76
snR38snR38 ATG31Q12421 196 aa-2.22□□□□□ -2.76
snR38snR38 DRS2P39524 1355 aa-2.23□□□□□ -2.77
snR38snR38 SNF4P12904 322 aa-2.23□□□□□ -2.77
snR38snR38 RTR1P40084 226 aaPredicted RBP-2.23□□□□□ -2.77
snR38snR38 PDS1P40316 373 aaPredicted RBP-2.23□□□□□ -2.77
snR38snR38 DYN3Q04949 312 aa-2.23□□□□□ -2.77
snR38snR38 GMC2Q06201 188 aa-2.23□□□□□ -2.77
snR38snR38 GIS3Q12418 502 aa-2.23□□□□□ -2.77
snR38snR38 HSL1P34244 1518 aa-2.23□□□□□ -2.77
snR38snR38 MRP1P10662 321 aaKnown RBP-2.24□□□□□ -2.77
snR38snR38 HYP2P23301 157 aaKnown RBP-2.24□□□□□ -2.77
snR38snR38 YCR090CP25654 182 aaKnown RBP-2.24□□□□□ -2.77
snR38snR38 NSE4P43124 402 aa-2.24□□□□□ -2.77
snR38snR38 VPS55P47111 140 aa-2.24□□□□□ -2.77
snR38snR38 GEP7P53171 287 aa-2.24□□□□□ -2.77
snR38snR38 YNL134CP53912 376 aaKnown RBP-2.24□□□□□ -2.77
snR38snR38 RHO1P06780 209 aaKnown RBP-2.25□□□□□ -2.77
snR38snR38 TCP1P12612 559 aaKnown RBP-2.25□□□□□ -2.77
snR38snR38 ATG8P38182 117 aaRIP-Chip data-2.25□□□□□ -2.77not detected
snR38snR38 YGR269WP40326 108 aa-2.25□□□□□ -2.77
snR38snR38 MCM22P47167 239 aa-2.25□□□□□ -2.77
snR38snR38 NSA1P53136 463 aaPredicted RBP-2.25□□□□□ -2.77
snR38snR38 HNT1Q04344 158 aaKnown RBP-2.25□□□□□ -2.77
snR38snR38 YLR126CQ12288 251 aa-2.25□□□□□ -2.77
snR38snR38 YKL075CP36083 450 aa-2.26□□□□□ -2.77
snR38snR38 MRPL50P53724 139 aa-2.26□□□□□ -2.77
snR38snR38 YMR253CQ04835 414 aa-2.26□□□□□ -2.77
snR38snR38 ATG41Q12048 136 aa-2.26□□□□□ -2.77
snR38snR38 SSK22P25390 1331 aaPredicted RBP-2.26□□□□□ -2.77
snR38snR38 IDP1P21954 428 aaKnown RBP-2.27□□□□□ -2.77
snR38snR38 YEA6P39953 335 aa-2.27□□□□□ -2.77
snR38snR38 YER134CP40081 178 aa-2.27□□□□□ -2.77
snR38snR38 YFR035CP43608 114 aa-2.27□□□□□ -2.77
snR38snR38 YAR1P46683 200 aa-2.27□□□□□ -2.77
snR38snR38 YMR099CQ03161 297 aaKnown RBP-2.27□□□□□ -2.77
snR38snR38 DML1Q03652 475 aa-2.27□□□□□ -2.77
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms