RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	COQ11	Q05892	277 aa		3.53	□□□□□ -1.84
ATG2	YNL242W	HAA1	Q12753	694 aa	Known RBP	3.53	□□□□□ -1.84
ATG2	YNL242W	PRP8	P33334	2413 aa	Known RBP	3.53	□□□□□ -1.84
ATG2	YNL242W	POR1	P04840	283 aa	Known RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	CTA1	P15202	515 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	RPB11	P38902	120 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	ERG13	P54839	491 aa	Known RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	RPC11	Q04307	110 aa	Predicted RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	SYM1	Q06563	197 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	ECM29	P38737	1868 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	ADH1	P00330	348 aa	Known RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	CHO1	P08456	276 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	FEN2	P25621	512 aa	Known RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	SPC29	P33419	253 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	YPC1	P38298	316 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	GGC1	P38988	300 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	SNU13	P39990	126 aa	Known RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	RHO3	Q00245	231 aa	Known RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	TPT1	Q12272	230 aa	Known RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	MAK32	P23060	363 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	SHB17	P36136	271 aa	Known RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	PAC2	P39937	518 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	YDL211C	Q12121	372 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	Q0182	Q9ZZW1	134 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	FMP49	A0A023PZB3	126 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	ILV5	P06168	395 aa	Known RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	ERS1	P17261	260 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	UGX2	P32772	223 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	ERJ5	P43613	295 aa	Predicted RBP	3.52	□□□□□ -1.85
ATG2	YNL242W	BOR1	P53838	576 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	YNL165W	P53891	406 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	RNH201	P53942	307 aa		3.52	□□□□□ -1.85
ATG2	YNL242W	OPI3	P05375	206 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	ATP10	P18496	279 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	ERG8	P24521	451 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	RML2	P32611	393 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	SNO3	P43544	222 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	YFR020W	P43600	232 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	PDR17	P53844	350 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	DMA2	P53924	522 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	SNP1	Q00916	300 aa	Predicted RBP	3.51	□□□□□ -1.85
ATG2	YNL242W	PET191	Q02772	108 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	THI74	Q04083	370 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	CTS2	Q06350	511 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	GEP3	Q08622	556 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	USB1	Q12208	290 aa	Known RBP	3.51	□□□□□ -1.85
ATG2	YNL242W	MCT1	Q12283	360 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	SMT3	Q12306	101 aa	Known RBP	3.51	□□□□□ -1.85
ATG2	YNL242W	RFA2	P26754	273 aa	Known RBP	3.51	□□□□□ -1.85
ATG2	YNL242W	ARO4	P32449	370 aa	Known RBP	3.51	□□□□□ -1.85
ATG2	YNL242W	VHS2	P40463	436 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	PHS1	P40857	217 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	SMK1	P41808	388 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	CIS3	P47001	227 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	PIN3	Q06449	215 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	LDS2	Q08218	356 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	PRR2	Q12310	699 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	RNH203	Q12338	110 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	TRA1	P38811	3744 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	EMP70	P32802	667 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	VEL1	P53058	206 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	YML079W	Q03629	201 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	XYL2	Q07993	356 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	YLR111W	Q12528	110 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	MEC1	P38111	2368 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	SLM6	P38343	150 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	RPS26A	P39938	119 aa	Known RBP	3.51	□□□□□ -1.85
ATG2	YNL242W	RPS26B	P39939	119 aa	Known RBP	3.51	□□□□□ -1.85
ATG2	YNL242W	PIC2	P40035	300 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	CDC40	P40968	455 aa	Predicted RBP	3.51	□□□□□ -1.85
ATG2	YNL242W	LST7	P53237	242 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	YLR118C	Q12354	227 aa		3.51	□□□□□ -1.85
ATG2	YNL242W	TOA2	P32774	122 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	QDR3	P38227	689 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	YER134C	P40081	178 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	GPP1	P41277	250 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	YDL186W	P48568	277 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	TPC1	P53257	314 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	RPL34A	P87262	121 aa	Predicted RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	YPL014W	Q02606	381 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	LIP2	Q06005	328 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	YPR174C	Q06616	221 aa	Predicted RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	HNT3	Q08702	217 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	RPB8	P20436	146 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	UTR5	P32630	166 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	YKL097C	P34245	136 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	PHD1	P36093	366 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	SPG5	P42933	373 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	YLR460C	P54007	376 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	LPP1	Q04396	274 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	ASM4	Q05166	528 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	ARR3	Q06598	404 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
ATG2	YNL242W	RAD6	P06104	172 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	RPL20A	P0CX23	172 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	RPL20B	P0CX24	172 aa	Predicted RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	SAG1	P20840	650 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	AGA2	P32781	87 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	YKL071W	P36086	256 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	FRM2	P37261	193 aa		3.5	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 139 ms