RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W YDL009CQ12210 107 aa3.77□□□□□ -1.81
CBF5YLR175W RDL1Q12305 139 aaKnown RBP3.77□□□□□ -1.81
CBF5YLR175W YLR146W-AQ2V2P1 62 aa3.77□□□□□ -1.81
CBF5YLR175W YGL194C-AQ2V2P6 80 aa3.77□□□□□ -1.81
CBF5YLR175W Q0297Q9ZZV8 51 aa3.77□□□□□ -1.81
CBF5YLR175W EMP24P32803 203 aaKnown RBP3.76□□□□□ -1.81
CBF5YLR175W CBT1P36038 271 aaPredicted RBP3.76□□□□□ -1.81
CBF5YLR175W SLM6P38343 150 aa3.76□□□□□ -1.81
CBF5YLR175W ASP1P38986 381 aaPredicted RBP3.76□□□□□ -1.81
CBF5YLR175W GCV3P39726 170 aaPredicted RBP3.76□□□□□ -1.81
CBF5YLR175W SSO2P39926 295 aa3.76□□□□□ -1.81
CBF5YLR175W YEA6P39953 335 aa3.76□□□□□ -1.81
CBF5YLR175W SYG1P40528 902 aa3.76□□□□□ -1.81
CBF5YLR175W YJR111CP47148 283 aaKnown RBP3.76□□□□□ -1.81
CBF5YLR175W SRB7P47822 140 aa3.76□□□□□ -1.81
CBF5YLR175W YGL262WP53054 175 aa3.76□□□□□ -1.81
CBF5YLR175W YGL114WP53134 725 aa3.76□□□□□ -1.81
CBF5YLR175W MSO1P53604 210 aaKnown RBP3.76□□□□□ -1.81
CBF5YLR175W DID2P69771 204 aa3.76□□□□□ -1.81
CBF5YLR175W COA4Q05809 96 aa3.76□□□□□ -1.81
CBF5YLR175W YFH1Q07540 174 aa3.76□□□□□ -1.81
CBF5YLR175W RRT7Q07829 113 aa3.76□□□□□ -1.81
CBF5YLR175W RPL9AP05738 191 aaKnown RBP3.75□□□□□ -1.81
CBF5YLR175W YKL162CP36052 402 aa3.75□□□□□ -1.81
CBF5YLR175W ADH5P38113 351 aaKnown RBP3.75□□□□□ -1.81
CBF5YLR175W LSM12P38828 187 aaKnown RBP3.75□□□□□ -1.81
CBF5YLR175W YFL015CP43578 164 aa3.75□□□□□ -1.81
CBF5YLR175W YHC3P47040 408 aa3.75□□□□□ -1.81
CBF5YLR175W BUL1P48524 976 aa3.75□□□□□ -1.81
CBF5YLR175W RPL9BP51401 191 aaKnown RBP3.75□□□□□ -1.81
CBF5YLR175W PKP2P53170 491 aa3.75□□□□□ -1.81
CBF5YLR175W JAC1P53193 184 aa3.75□□□□□ -1.81
CBF5YLR175W WSC2P53832 503 aa3.75□□□□□ -1.81
CBF5YLR175W CWC25P53854 179 aaKnown RBP3.75□□□□□ -1.81
CBF5YLR175W MOT3P54785 490 aaKnown RBP3.75□□□□□ -1.81
CBF5YLR175W STD1Q02794 444 aa3.75□□□□□ -1.81
CBF5YLR175W LPP1Q04396 274 aa3.75□□□□□ -1.81
CBF5YLR175W ADH6Q04894 360 aaKnown RBP3.75□□□□□ -1.81
CBF5YLR175W TRI1Q05024 226 aa3.75□□□□□ -1.81
CBF5YLR175W IRC25Q07951 179 aa3.75□□□□□ -1.81
CBF5YLR175W AIM45Q12480 344 aaKnown RBP3.75□□□□□ -1.81
CBF5YLR175W FMP16Q12497 93 aa3.75□□□□□ -1.81
CBF5YLR175W YJR112W-AQ3E743 109 aa3.75□□□□□ -1.81
CBF5YLR175W YBR255C-AQ3E776 120 aa3.75□□□□□ -1.81
CBF5YLR175W YBR298C-AQ8TGK4 73 aa3.75□□□□□ -1.81
CBF5YLR175W YDR157WA0A023PZE8 133 aa3.74□□□□□ -1.81
CBF5YLR175W BGL2P15703 313 aaKnown RBP3.74□□□□□ -1.81
CBF5YLR175W ERV1P27882 189 aa3.74□□□□□ -1.81
CBF5YLR175W ECM31P38122 312 aa3.74□□□□□ -1.81
CBF5YLR175W YEA4P40004 342 aa3.74□□□□□ -1.81
CBF5YLR175W AGX1P43567 385 aa3.74□□□□□ -1.81
CBF5YLR175W ARP3P47117 449 aaKnown RBP3.74□□□□□ -1.81
CBF5YLR175W UBC12P52491 188 aa3.74□□□□□ -1.81
CBF5YLR175W UBC11P52492 156 aa3.74□□□□□ -1.81
CBF5YLR175W YGL117WP53133 265 aa3.74□□□□□ -1.81
CBF5YLR175W TIM44Q01852 431 aa3.74□□□□□ -1.81
CBF5YLR175W EST3Q03096 181 aa3.74□□□□□ -1.81
CBF5YLR175W MIX17Q03667 156 aa3.74□□□□□ -1.81
CBF5YLR175W YDR415CQ04033 374 aaPredicted RBP3.74□□□□□ -1.81
CBF5YLR175W YMR082CQ04276 118 aa3.74□□□□□ -1.81
CBF5YLR175W BER1Q06688 274 aaKnown RBP3.74□□□□□ -1.81
CBF5YLR175W YPL264CQ08980 353 aa3.74□□□□□ -1.81
CBF5YLR175W GEP5Q12393 293 aa3.74□□□□□ -1.81
CBF5YLR175W ATG31Q12421 196 aa3.74□□□□□ -1.81
CBF5YLR175W YHR213W-AQ8TGT4 77 aa3.74□□□□□ -1.81
CBF5YLR175W YBR085C-AO43137 85 aa3.73□□□□□ -1.81
CBF5YLR175W UBI4P0CG63 381 aaKnown RBP3.73□□□□□ -1.81
CBF5YLR175W CDS1P38221 457 aa3.73□□□□□ -1.81
CBF5YLR175W CUE1P38428 203 aa3.73□□□□□ -1.81
CBF5YLR175W PSD1P39006 500 aa3.73□□□□□ -1.81
CBF5YLR175W VMA7P39111 118 aa3.73□□□□□ -1.81
CBF5YLR175W BNA1P47096 177 aa3.73□□□□□ -1.81
CBF5YLR175W YGR050CP53231 118 aa3.73□□□□□ -1.81
CBF5YLR175W YNR071CP53757 342 aa3.73□□□□□ -1.81
CBF5YLR175W YMR090WQ04304 227 aaKnown RBP3.73□□□□□ -1.81
CBF5YLR175W FSH2Q05015 223 aa3.73□□□□□ -1.81
CBF5YLR175W HOF1Q05080 669 aa3.73□□□□□ -1.81
CBF5YLR175W ORM2Q06144 216 aa3.73□□□□□ -1.81
CBF5YLR175W CSI2Q08054 341 aa3.73□□□□□ -1.81
CBF5YLR175W YPS3Q12303 508 aa3.73□□□□□ -1.81
CBF5YLR175W ATG5Q12380 294 aa3.73□□□□□ -1.81
CBF5YLR175W YGL258W-AQ3E740 77 aa3.73□□□□□ -1.81
CBF5YLR175W COA2Q3E823 68 aa3.73□□□□□ -1.81
CBF5YLR175W YOS1Q3E834 85 aa3.73□□□□□ -1.81
CBF5YLR175W MRS4P23500 304 aa3.73□□□□□ -1.81
CBF5YLR175W FEN2P25621 512 aaKnown RBP3.73□□□□□ -1.81
CBF5YLR175W SIP1P32578 815 aa3.73□□□□□ -1.81
CBF5YLR175W PMU1P36069 295 aa3.73□□□□□ -1.81
CBF5YLR175W RTC3P38804 111 aaPredicted RBP3.73□□□□□ -1.81
CBF5YLR175W NOP16P40007 231 aaKnown RBP3.73□□□□□ -1.81
CBF5YLR175W YIL077CP40508 320 aa3.73□□□□□ -1.81
CBF5YLR175W YJL163CP46996 555 aa3.73□□□□□ -1.81
CBF5YLR175W PHO23P50947 330 aa3.73□□□□□ -1.81
CBF5YLR175W ERG25P53045 309 aa3.73□□□□□ -1.81
CBF5YLR175W FCF2Q12035 217 aaPredicted RBP3.73□□□□□ -1.81
CBF5YLR175W RPL15AP05748 204 aaKnown RBP3.72□□□□□ -1.81
CBF5YLR175W VMA11P32842 164 aa3.72□□□□□ -1.81
CBF5YLR175W ATP3P38077 311 aaKnown RBP3.72□□□□□ -1.81
CBF5YLR175W RFC2P40348 353 aa3.72□□□□□ -1.81
CBF5YLR175W YDL183CP48569 320 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms