RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W YGR050CP53231 118 aa1.46□□□□□ -2.18
MSL1YIR009W YLR460CP54007 376 aa1.46□□□□□ -2.18
MSL1YIR009W ARO80Q04052 950 aa1.46□□□□□ -2.18
MSL1YIR009W IRA2P19158 3079 aa1.46□□□□□ -2.18
MSL1YIR009W MBF1O14467 151 aaKnown RBP1.45□□□□□ -2.18
MSL1YIR009W QCR2P07257 368 aa1.45□□□□□ -2.18
MSL1YIR009W RPS24AP0CX31 135 aaKnown RBP1.45□□□□□ -2.18
MSL1YIR009W RPS24BP0CX32 135 aaKnown RBP1.45□□□□□ -2.18
MSL1YIR009W KRE1P17260 313 aa1.45□□□□□ -2.18
MSL1YIR009W POP4P38336 279 aa1.45□□□□□ -2.18
MSL1YIR009W GLE2P40066 365 aa1.45□□□□□ -2.18
MSL1YIR009W YER121WP40076 114 aa1.45□□□□□ -2.18
MSL1YIR009W EFM5P53200 248 aaKnown RBP1.45□□□□□ -2.18
MSL1YIR009W YNL184CP53876 108 aa1.45□□□□□ -2.18
MSL1YIR009W PEX12Q04370 399 aa1.45□□□□□ -2.18
MSL1YIR009W PEX11Q12462 236 aa1.45□□□□□ -2.18
MSL1YIR009W CDC8P00572 216 aa1.44□□□□□ -2.18
MSL1YIR009W SCO1P23833 295 aa1.44□□□□□ -2.18
MSL1YIR009W YCR090CP25654 182 aaKnown RBP1.44□□□□□ -2.18
MSL1YIR009W YKR041WP36134 250 aa1.44□□□□□ -2.18
MSL1YIR009W AME1P38313 324 aa1.44□□□□□ -2.18
MSL1YIR009W YGL235WP53071 178 aa1.44□□□□□ -2.18
MSL1YIR009W YGR026WP53217 278 aa1.44□□□□□ -2.18
MSL1YIR009W COG5P53951 403 aa1.44□□□□□ -2.18
MSL1YIR009W TRM12Q04235 462 aa1.44□□□□□ -2.18
MSL1YIR009W GGA1Q06336 557 aa1.44□□□□□ -2.18
MSL1YIR009W FEX1Q08913 375 aa1.44□□□□□ -2.18
MSL1YIR009W FEX2Q08991 375 aa1.44□□□□□ -2.18
MSL1YIR009W YOR283WQ12040 230 aaKnown RBP1.44□□□□□ -2.18
MSL1YIR009W FAS1P07149 2051 aaKnown RBP1.44□□□□□ -2.18
MSL1YIR009W YLR422WQ06409 1932 aa1.44□□□□□ -2.18
MSL1YIR009W MSW1P04803 379 aa1.43□□□□□ -2.18
MSL1YIR009W RPL9AP05738 191 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W RPS28BP0C0X0 67 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W PET9P18239 318 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W CKS1P20486 150 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W MAG1P22134 296 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W BET1P22804 142 aa1.43□□□□□ -2.18
MSL1YIR009W MIG1P27705 504 aa1.43□□□□□ -2.18
MSL1YIR009W CTR2P38865 189 aa1.43□□□□□ -2.18
MSL1YIR009W SMD3P43321 101 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W RPL9BP51401 191 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W AIF1P52923 378 aa1.43□□□□□ -2.18
MSL1YIR009W ARO8P53090 500 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W YNL140CP53910 189 aa1.43□□□□□ -2.18
MSL1YIR009W YNL010WP53981 241 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W AIM34Q03673 198 aa1.43□□□□□ -2.18
MSL1YIR009W SUE1Q06524 206 aa1.43□□□□□ -2.18
MSL1YIR009W DGA1Q08650 418 aa1.43□□□□□ -2.18
MSL1YIR009W AKR2Q12013 749 aa1.43□□□□□ -2.18
MSL1YIR009W PSF1Q12488 208 aa1.43□□□□□ -2.18
MSL1YIR009W MHT1Q12525 324 aa1.43□□□□□ -2.18
MSL1YIR009W RPS28AQ3E7X9 67 aaPredicted RBP1.43□□□□□ -2.18
MSL1YIR009W URB1P34241 1764 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W DUR1,2P32528 1835 aaKnown RBP1.43□□□□□ -2.18
MSL1YIR009W NUP192P47054 1683 aa1.42□□□□□ -2.18
MSL1YIR009W TIM9O74700 87 aa1.42□□□□□ -2.18
MSL1YIR009W SNF4P12904 322 aa1.42□□□□□ -2.18
MSL1YIR009W SEC14P24280 304 aaKnown RBP1.42□□□□□ -2.18
MSL1YIR009W SEC17P32602 292 aa1.42□□□□□ -2.18
MSL1YIR009W AIM2P39721 246 aa1.42□□□□□ -2.18
MSL1YIR009W YFH7P43591 353 aa1.42□□□□□ -2.18
MSL1YIR009W SNX4P47057 423 aa1.42□□□□□ -2.18
MSL1YIR009W ARP3P47117 449 aaKnown RBP1.42□□□□□ -2.18
MSL1YIR009W YJR111CP47148 283 aaKnown RBP1.42□□□□□ -2.18
MSL1YIR009W UBC12P52491 188 aa1.42□□□□□ -2.18
MSL1YIR009W YGL088WP53151 121 aa1.42□□□□□ -2.18
MSL1YIR009W CAB4P53332 305 aa1.42□□□□□ -2.18
MSL1YIR009W SLM2P53955 656 aa1.42□□□□□ -2.18
MSL1YIR009W DID2P69771 204 aa1.42□□□□□ -2.18
MSL1YIR009W YDR274CP87283 123 aa1.42□□□□□ -2.18
MSL1YIR009W SPG3Q04398 127 aaPredicted RBP1.42□□□□□ -2.18
MSL1YIR009W YMR315WQ04869 349 aaKnown RBP1.42□□□□□ -2.18
MSL1YIR009W SHH4Q06236 168 aa1.42□□□□□ -2.18
MSL1YIR009W YOL014WQ08110 124 aa1.42□□□□□ -2.18
MSL1YIR009W MCP1Q12106 302 aa1.42□□□□□ -2.18
MSL1YIR009W ATO3Q12359 275 aa1.42□□□□□ -2.18
MSL1YIR009W REP2P03872 296 aa1.41□□□□□ -2.18
MSL1YIR009W URA5P13298 226 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W DPM1P14020 267 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W RPB3P16370 318 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W RSA4P25382 515 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W MGT1P26188 188 aa1.41□□□□□ -2.18
MSL1YIR009W MED6P38782 295 aa1.41□□□□□ -2.18
MSL1YIR009W NVJ1P38881 321 aa1.41□□□□□ -2.18
MSL1YIR009W SPO73P40031 143 aa1.41□□□□□ -2.18
MSL1YIR009W LSM4P40070 187 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W TIF34P40217 347 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W ICE2P40499 491 aa1.41□□□□□ -2.18
MSL1YIR009W MNN5P46982 586 aa1.41□□□□□ -2.18
MSL1YIR009W YNL247WP53852 767 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W MIX17Q03667 156 aa1.41□□□□□ -2.18
MSL1YIR009W YDR249CQ03787 373 aa1.41□□□□□ -2.18
MSL1YIR009W HNT1Q04344 158 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W YDL085C-AQ3E7B7 68 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W IRA1P18963 3092 aa1.41□□□□□ -2.18
MSL1YIR009W SEC16P48415 2195 aaKnown RBP1.41□□□□□ -2.18
MSL1YIR009W TY3B-IQ7LHG5 1498 aaKnown RBP1.4□□□□□ -2.19
MSL1YIR009W YPR096CO13587 100 aa1.4□□□□□ -2.19
MSL1YIR009W GRX2P17695 143 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms