RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C ATG31Q12421 196 aa5.94□□□□□ -1.46
SOD2YHR008C UBA3Q99344 299 aa5.94□□□□□ -1.46
SOD2YHR008C RPS18AP0CX55 146 aaKnown RBP5.93□□□□□ -1.46
SOD2YHR008C RPS18BP0CX56 146 aaPredicted RBP5.93□□□□□ -1.46
SOD2YHR008C TRR1P29509 319 aaKnown RBP5.93□□□□□ -1.46
SOD2YHR008C CDS1P38221 457 aa5.93□□□□□ -1.46
SOD2YHR008C VMA22P38784 181 aa5.93□□□□□ -1.46
SOD2YHR008C OTU1P43558 301 aa5.93□□□□□ -1.46
SOD2YHR008C OCA2P53949 197 aa5.93□□□□□ -1.46
SOD2YHR008C RRT1P38192 103 aa5.92□□□□□ -1.46
SOD2YHR008C SNF11P38956 169 aa5.92□□□□□ -1.46
SOD2YHR008C RTT103Q05543 409 aa5.92□□□□□ -1.46
SOD2YHR008C GPN3Q06543 272 aa5.92□□□□□ -1.46
SOD2YHR008C RBD2Q12270 262 aa5.92□□□□□ -1.46
SOD2YHR008C YGL258W-AQ3E740 77 aa5.92□□□□□ -1.46
SOD2YHR008C ARP3P47117 449 aaKnown RBP5.91□□□□□ -1.46
SOD2YHR008C MCM21Q06675 368 aa5.91□□□□□ -1.46
SOD2YHR008C ATG41Q12048 136 aa5.91□□□□□ -1.46
SOD2YHR008C CAP2P13517 287 aa5.9□□□□□ -1.46
SOD2YHR008C SIP1P32578 815 aa5.9□□□□□ -1.46
SOD2YHR008C SEC66P33754 206 aa5.9□□□□□ -1.46
SOD2YHR008C SNX4P47057 423 aa5.9□□□□□ -1.46
SOD2YHR008C MSO1P53604 210 aaKnown RBP5.9□□□□□ -1.46
SOD2YHR008C MAK3Q03503 176 aa5.9□□□□□ -1.46
SOD2YHR008C YML018CQ03730 393 aa5.9□□□□□ -1.46
SOD2YHR008C LDS2Q08218 356 aa5.9□□□□□ -1.46
SOD2YHR008C DFG10P40526 253 aa5.89□□□□□ -1.47
SOD2YHR008C YPR195CQ06594 109 aa5.89□□□□□ -1.47
SOD2YHR008C SNU13P39990 126 aaKnown RBP5.88□□□□□ -1.47
SOD2YHR008C YNL200CP40165 246 aaKnown RBP5.88□□□□□ -1.47
SOD2YHR008C MDJ2P42834 146 aa5.88□□□□□ -1.47
SOD2YHR008C YAP1802P53309 568 aa5.88□□□□□ -1.47
SOD2YHR008C RCF1Q03713 159 aa5.88□□□□□ -1.47
SOD2YHR008C IZH3Q07959 543 aa5.88□□□□□ -1.47
SOD2YHR008C YOR011W-AQ3E807 68 aa5.88□□□□□ -1.47
SOD2YHR008C AFR1P33304 620 aa5.87□□□□□ -1.47
SOD2YHR008C YBL071CP38185 102 aa5.87□□□□□ -1.47
SOD2YHR008C YJL027CP47063 138 aaPredicted RBP5.87□□□□□ -1.47
SOD2YHR008C GRX3Q03835 250 aa5.87□□□□□ -1.47
SOD2YHR008C YMR244WQ04018 355 aa5.87□□□□□ -1.47
SOD2YHR008C MRPL35Q06678 367 aa5.87□□□□□ -1.47
SOD2YHR008C POP5P28005 173 aa5.86□□□□□ -1.47
SOD2YHR008C FMT1P32785 401 aa5.86□□□□□ -1.47
SOD2YHR008C LSM12P38828 187 aaKnown RBP5.86□□□□□ -1.47
SOD2YHR008C GPI2P46961 280 aa5.86□□□□□ -1.47
SOD2YHR008C EST3Q03096 181 aa5.86□□□□□ -1.47
SOD2YHR008C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SOD2YHR008C YNL146C-AQ3E7Z1 64 aa5.86□□□□□ -1.47
SOD2YHR008C MET17P06106 444 aa5.85□□□□□ -1.47
SOD2YHR008C ERS1P17261 260 aa5.85□□□□□ -1.47
SOD2YHR008C PUP1P25043 261 aa5.85□□□□□ -1.47
SOD2YHR008C PCL6P40038 420 aa5.85□□□□□ -1.47
SOD2YHR008C RTS2P40962 232 aa5.85□□□□□ -1.47
SOD2YHR008C YIP3P53633 176 aa5.85□□□□□ -1.47
SOD2YHR008C MRPS8Q03799 155 aa5.85□□□□□ -1.47
SOD2YHR008C KEI1Q06346 221 aa5.85□□□□□ -1.47
SOD2YHR008C POS5Q06892 414 aa5.85□□□□□ -1.47
SOD2YHR008C PAM18Q07914 168 aa5.85□□□□□ -1.47
SOD2YHR008C SCP1Q08873 200 aa5.85□□□□□ -1.47
SOD2YHR008C YPL162CQ12042 273 aa5.85□□□□□ -1.47
SOD2YHR008C ZRC1P20107 442 aa5.84□□□□□ -1.47
SOD2YHR008C YCR001WP25347 104 aa5.84□□□□□ -1.47
SOD2YHR008C MRPL27P36526 146 aaPredicted RBP5.84□□□□□ -1.47
SOD2YHR008C YLR031WQ07978 186 aa5.84□□□□□ -1.47
SOD2YHR008C YPL225WQ08971 146 aaKnown RBP5.84□□□□□ -1.47
SOD2YHR008C PRM7Q12459 698 aa5.84□□□□□ -1.47
SOD2YHR008C YBR255C-AQ3E776 120 aa5.84□□□□□ -1.47
SOD2YHR008C PET20Q99373 253 aa5.84□□□□□ -1.47
SOD2YHR008C CUP2P15315 225 aa5.83□□□□□ -1.48
SOD2YHR008C CMC1P36064 111 aa5.83□□□□□ -1.48
SOD2YHR008C MIG3P39943 394 aa5.83□□□□□ -1.48
SOD2YHR008C RPL2AP0CX45 254 aaKnown RBP5.82□□□□□ -1.48
SOD2YHR008C RPL2BP0CX46 254 aaKnown RBP5.82□□□□□ -1.48
SOD2YHR008C AVT5P38176 459 aa5.82□□□□□ -1.48
SOD2YHR008C LAG1P38703 411 aa5.82□□□□□ -1.48
SOD2YHR008C HTD2P38790 280 aaKnown RBP5.82□□□□□ -1.48
SOD2YHR008C SPO19Q03029 223 aa5.82□□□□□ -1.48
SOD2YHR008C NRG1Q03125 231 aa5.82□□□□□ -1.48
SOD2YHR008C SYM1Q06563 197 aa5.82□□□□□ -1.48
SOD2YHR008C YPR063CQ12160 140 aa5.82□□□□□ -1.48
SOD2YHR008C PAA1Q12447 191 aaKnown RBP5.82□□□□□ -1.48
SOD2YHR008C RPS11AP0CX47 156 aaKnown RBP5.81□□□□□ -1.48
SOD2YHR008C RPS11BP0CX48 156 aaKnown RBP5.81□□□□□ -1.48
SOD2YHR008C NSA2P40078 261 aaKnown RBP5.81□□□□□ -1.48
SOD2YHR008C GIM3P53900 129 aa5.81□□□□□ -1.48
SOD2YHR008C DYN2Q02647 92 aa5.81□□□□□ -1.48
SOD2YHR008C THI74Q04083 370 aa5.81□□□□□ -1.48
SOD2YHR008C LCL2Q08045 131 aa5.81□□□□□ -1.48
SOD2YHR008C ATG5Q12380 294 aa5.81□□□□□ -1.48
SOD2YHR008C ANB1P19211 157 aa5.8□□□□□ -1.48
SOD2YHR008C CPR4P25334 318 aa5.8□□□□□ -1.48
SOD2YHR008C HOM6P31116 359 aaKnown RBP5.8□□□□□ -1.48
SOD2YHR008C PTC7P38797 343 aa5.8□□□□□ -1.48
SOD2YHR008C YJR015WP47090 510 aa5.8□□□□□ -1.48
SOD2YHR008C YGR018CP53211 109 aa5.8□□□□□ -1.48
SOD2YHR008C YPS3Q12303 508 aa5.8□□□□□ -1.48
SOD2YHR008C COS8P38723 381 aa5.79□□□□□ -1.48
SOD2YHR008C RTC3P38804 111 aaPredicted RBP5.79□□□□□ -1.48
SOD2YHR008C BFR1P38934 470 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
SOD2YHR008C YER135CP40082 130 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms