RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	NCE101	Q02820	53 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YPL113C	Q02961	396 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	GAL83	Q04739	417 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YPR098C	Q06089	161 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	GAS2	Q06135	555 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	PEX30	Q06169	523 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YLR446W	Q06204	433 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	KEI1	Q06346	221 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	NAT3	Q06504	195 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	SDO1	Q07953	250 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	MIM1	Q08176	113 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YOL118C	Q08259	102 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	RDL2	Q08742	149 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	RAD28	Q12021	506 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YOR214C	Q12282	236 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	MCT1	Q12283	360 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	ATG5	Q12380	294 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	TFC7	Q12415	435 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	WIP1	Q2V2P8	89 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YCR024C-B	Q3E7Z8	88 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	BPH1	P25356	2167 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	UBR1	P19812	1950 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	SAL1	D6W196	494 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YMR316C-A	I2HB70	103 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	TRP1	P00912	224 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	TFS1	P14306	219 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	CPR1	P14832	162 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	FCY2	P17064	533 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	PRE7	P23724	241 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	YGL010W	P25338	174 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	TRR1	P29509	319 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	LDS1	P31379	325 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	AGA2	P32781	87 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	SSS1	P35179	80 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	MCH2	P36032	473 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	ECM31	P38122	312 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	ATG8	P38182	117 aa	RIP-Chip data	0.66	□□□□□ -2.3	not detected
SEC1	YDR164C	SHG1	P38337	142 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	PRS3	P38689	320 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	GEP4	P38812	185 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	PFS1	P38872	237 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	SEN34	P39707	275 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	GCV3	P39726	170 aa	Predicted RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	SNU13	P39990	126 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	YMR144W	P40214	342 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	SLM1	P40485	686 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YIL067C	P40514	678 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	VMA21	P41806	77 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YFL067W	P43537	175 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	ERJ5	P43613	295 aa	Predicted RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	KEG1	P43614	200 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	NCA3	P46955	337 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	LCB3	P47013	409 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	MOG1	P47123	218 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	UBC13	P52490	153 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YGL262W	P53054	175 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YGL101W	P53144	215 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	MTM1	P53320	366 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	MKC7	P53379	596 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	MPP6	P53725	186 aa	Predicted RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	SWS2	P53937	143 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YLR460C	P54007	376 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	DAD3	P69850	94 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	SDC1	Q03323	175 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YDR391C	Q04170	232 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	HNT1	Q04344	158 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	ATG38	Q05789	226 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	ANT1	Q06497	328 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	NOC4	Q06512	552 aa	Predicted RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	BER1	Q06688	274 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	RAF1	Q06891	181 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	NDE2	Q07500	545 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	CSI2	Q08054	341 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	ZEO1	Q08245	113 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YOR376W	Q08900	122 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YRA1	Q12159	226 aa	Known RBP	0.66	□□□□□ -2.3
SEC1	YDR164C	FCY1	Q12178	158 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	RFM1	Q12192	310 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	GEP5	Q12393	293 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	AGC1	Q12482	902 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YOR343C	Q12484	108 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	HUT1	Q12520	339 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YDR034W-B	Q6Q5X2	51 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	YHR214C-E	Q8TGK0	99 aa		0.66	□□□□□ -2.3
SEC1	YDR164C	RPL39	P04650	51 aa		0.65	□□□□□ -2.31
SEC1	YDR164C	CBP6	P07253	162 aa	Predicted RBP	0.65	□□□□□ -2.31
SEC1	YDR164C	RPS25B	P0C0T4	108 aa	Known RBP	0.65	□□□□□ -2.31
SEC1	YDR164C	UBI4	P0CG63	381 aa	Known RBP	0.65	□□□□□ -2.31
SEC1	YDR164C	RPL40A	P0CH08	128 aa	Known RBP	0.65	□□□□□ -2.31
SEC1	YDR164C	RPL40B	P0CH09	128 aa	Known RBP	0.65	□□□□□ -2.31
SEC1	YDR164C	RPL30	P14120	105 aa	Known RBP	0.65	□□□□□ -2.31
SEC1	YDR164C	SCL1	P21243	252 aa	Known RBP	0.65	□□□□□ -2.31
SEC1	YDR164C	STP22	P25604	385 aa		0.65	□□□□□ -2.31
SEC1	YDR164C	KRE6	P32486	720 aa		0.65	□□□□□ -2.31
SEC1	YDR164C	NTF2	P33331	125 aa	Known RBP	0.65	□□□□□ -2.31
SEC1	YDR164C	GPX1	P36014	167 aa		0.65	□□□□□ -2.31
SEC1	YDR164C	PAM17	P36147	197 aa		0.65	□□□□□ -2.31
SEC1	YDR164C	SWD3	P38123	315 aa		0.65	□□□□□ -2.31
SEC1	YDR164C	YBR090C	P38253	122 aa		0.65	□□□□□ -2.31
SEC1	YDR164C	YGP1	P38616	354 aa	Known RBP	0.65	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms