RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C MIX17Q03667 156 aa3.48□□□□□ -1.85
RXT3YDL076C GRX3Q03835 250 aa3.48□□□□□ -1.85
RXT3YDL076C MGR3Q04472 501 aa3.48□□□□□ -1.85
RXT3YDL076C YMR252CQ04814 134 aa3.48□□□□□ -1.85
RXT3YDL076C NDE2Q07500 545 aa3.48□□□□□ -1.85
RXT3YDL076C PEX27Q08580 376 aa3.48□□□□□ -1.85
RXT3YDL076C AYT1Q12226 474 aa3.48□□□□□ -1.85
RXT3YDL076C RBD2Q12270 262 aa3.48□□□□□ -1.85
RXT3YDL076C MRPL23Q12487 163 aaPredicted RBP3.48□□□□□ -1.85
RXT3YDL076C YOS1Q3E834 85 aa3.48□□□□□ -1.85
RXT3YDL076C CDC23P16522 626 aa3.47□□□□□ -1.85
RXT3YDL076C FUS3P16892 353 aaKnown RBP3.47□□□□□ -1.85
RXT3YDL076C PET18P25362 215 aa3.47□□□□□ -1.85
RXT3YDL076C ARO4P32449 370 aaKnown RBP3.47□□□□□ -1.85
RXT3YDL076C UTP30P36144 274 aaKnown RBP3.47□□□□□ -1.85
RXT3YDL076C SSO2P39926 295 aa3.47□□□□□ -1.85
RXT3YDL076C VPS55P47111 140 aa3.47□□□□□ -1.85
RXT3YDL076C BXI1P48558 297 aa3.47□□□□□ -1.85
RXT3YDL076C SOL1P50278 321 aa3.47□□□□□ -1.85
RXT3YDL076C ERG25P53045 309 aa3.47□□□□□ -1.85
RXT3YDL076C ERP1Q05359 219 aaKnown RBP3.47□□□□□ -1.85
RXT3YDL076C ASR1Q06834 288 aa3.47□□□□□ -1.85
RXT3YDL076C YEL009C-AA0A023PZF2 135 aa3.46□□□□□ -1.86
RXT3YDL076C RPL12AP0CX53 165 aaKnown RBP3.46□□□□□ -1.86
RXT3YDL076C RPL12BP0CX54 165 aa3.46□□□□□ -1.86
RXT3YDL076C URA6P15700 204 aa3.46□□□□□ -1.86
RXT3YDL076C INO2P26798 304 aa3.46□□□□□ -1.86
RXT3YDL076C YUH1P35127 236 aa3.46□□□□□ -1.86
RXT3YDL076C RIB5P38145 238 aa3.46□□□□□ -1.86
RXT3YDL076C GEP4P38812 185 aa3.46□□□□□ -1.86
RXT3YDL076C YHR138CP38841 114 aaPredicted RBP3.46□□□□□ -1.86
RXT3YDL076C PRM5P40476 318 aa3.46□□□□□ -1.86
RXT3YDL076C RPR2P40571 144 aa3.46□□□□□ -1.86
RXT3YDL076C YJL118WP47022 219 aa3.46□□□□□ -1.86
RXT3YDL076C GPI14P47088 403 aaKnown RBP3.46□□□□□ -1.86
RXT3YDL076C YAE1P47118 141 aaPredicted RBP3.46□□□□□ -1.86
RXT3YDL076C YGL262WP53054 175 aa3.46□□□□□ -1.86
RXT3YDL076C FMP48P53233 369 aa3.46□□□□□ -1.86
RXT3YDL076C ALG9P53868 555 aaKnown RBP3.46□□□□□ -1.86
RXT3YDL076C NMA1Q06178 401 aaKnown RBP3.46□□□□□ -1.86
RXT3YDL076C FCY1Q12178 158 aa3.46□□□□□ -1.86
RXT3YDL076C ATO3Q12359 275 aa3.46□□□□□ -1.86
RXT3YDL076C RPL9AP05738 191 aaKnown RBP3.45□□□□□ -1.86
RXT3YDL076C YHR212W-AP0CX91 67 aa3.45□□□□□ -1.86
RXT3YDL076C CPR1P14832 162 aaKnown RBP3.45□□□□□ -1.86
RXT3YDL076C IFM1P25038 676 aa3.45□□□□□ -1.86
RXT3YDL076C VMA5P31412 392 aaKnown RBP3.45□□□□□ -1.86
RXT3YDL076C RIB7P33312 244 aa3.45□□□□□ -1.86
RXT3YDL076C SDH4P37298 181 aa3.45□□□□□ -1.86
RXT3YDL076C SWD3P38123 315 aa3.45□□□□□ -1.86
RXT3YDL076C YBR137WP38276 179 aa3.45□□□□□ -1.86
RXT3YDL076C PCL7P40186 285 aa3.45□□□□□ -1.86
RXT3YDL076C BNA6P43619 295 aa3.45□□□□□ -1.86
RXT3YDL076C YJR012CP47087 207 aa3.45□□□□□ -1.86
RXT3YDL076C DOC1P53068 250 aa3.45□□□□□ -1.86
RXT3YDL076C TOS8P53147 276 aa3.45□□□□□ -1.86
RXT3YDL076C YMR181CQ03231 154 aa3.45□□□□□ -1.86
RXT3YDL076C VPS71Q03433 280 aa3.45□□□□□ -1.86
RXT3YDL076C MAK3Q03503 176 aa3.45□□□□□ -1.86
RXT3YDL076C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
RXT3YDL076C YOL029CQ08187 201 aa3.45□□□□□ -1.86
RXT3YDL076C TPT1Q12272 230 aaKnown RBP3.45□□□□□ -1.86
RXT3YDL076C TFC7Q12415 435 aa3.45□□□□□ -1.86
RXT3YDL076C ODC2Q99297 307 aa3.45□□□□□ -1.86
RXT3YDL076C BUD23P25627 275 aaPredicted RBP3.44□□□□□ -1.86
RXT3YDL076C ERG24P32462 438 aaKnown RBP3.44□□□□□ -1.86
RXT3YDL076C UTR5P32630 166 aa3.44□□□□□ -1.86
RXT3YDL076C VAM7P32912 316 aa3.44□□□□□ -1.86
RXT3YDL076C FMP23P38231 175 aa3.44□□□□□ -1.86
RXT3YDL076C IKI1P38874 309 aa3.44□□□□□ -1.86
RXT3YDL076C TMA20P89886 181 aaPredicted RBP3.44□□□□□ -1.86
RXT3YDL076C SPO19Q03029 223 aa3.44□□□□□ -1.86
RXT3YDL076C HEM25Q07534 307 aa3.44□□□□□ -1.86
RXT3YDL076C LDS2Q08218 356 aa3.44□□□□□ -1.86
RXT3YDL076C MED4Q12343 284 aa3.44□□□□□ -1.86
RXT3YDL076C HIS3P06633 220 aa3.43□□□□□ -1.86
RXT3YDL076C OCH1P31755 480 aa3.43□□□□□ -1.86
RXT3YDL076C MSK1P32048 576 aa3.43□□□□□ -1.86
RXT3YDL076C HMX1P32339 317 aa3.43□□□□□ -1.86
RXT3YDL076C MED8P38304 223 aa3.43□□□□□ -1.86
RXT3YDL076C YFL067WP43537 175 aa3.43□□□□□ -1.86
RXT3YDL076C ATG18P43601 500 aa3.43□□□□□ -1.86
RXT3YDL076C VHT1P53241 593 aa3.43□□□□□ -1.86
RXT3YDL076C RRG8Q06109 277 aa3.43□□□□□ -1.86
RXT3YDL076C HRD1Q08109 551 aa3.43□□□□□ -1.86
RXT3YDL076C TIR4Q12218 487 aaPredicted RBP3.43□□□□□ -1.86
RXT3YDL076C ATG31Q12421 196 aa3.43□□□□□ -1.86
RXT3YDL076C SUS1Q6WNK7 96 aa3.43□□□□□ -1.86
RXT3YDL076C YLL053CP0CD98 152 aa3.42□□□□□ -1.86
RXT3YDL076C RPS18AP0CX55 146 aaKnown RBP3.42□□□□□ -1.86
RXT3YDL076C RPS18BP0CX56 146 aaPredicted RBP3.42□□□□□ -1.86
RXT3YDL076C YMR31P19955 123 aa3.42□□□□□ -1.86
RXT3YDL076C MIX23P38162 196 aa3.42□□□□□ -1.86
RXT3YDL076C RRF1P38771 230 aa3.42□□□□□ -1.86
RXT3YDL076C RTC3P38804 111 aaPredicted RBP3.42□□□□□ -1.86
RXT3YDL076C LSM12P38828 187 aaKnown RBP3.42□□□□□ -1.86
RXT3YDL076C SIM1P40472 476 aa3.42□□□□□ -1.86
RXT3YDL076C MRPL49P40858 161 aaPredicted RBP3.42□□□□□ -1.86
RXT3YDL076C FIP1P45976 327 aa3.42□□□□□ -1.86
RXT3YDL076C MSC3Q05812 728 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms