RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C SSN8P47821 323 aa1.47□□□□□ -2.17
ATG11YPR049C YGL204CP53089 101 aa1.47□□□□□ -2.17
ATG11YPR049C OKP1P53298 406 aa1.47□□□□□ -2.17
ATG11YPR049C COX12Q01519 83 aa1.47□□□□□ -2.17
ATG11YPR049C RDS3Q06835 107 aaPredicted RBP1.47□□□□□ -2.17
ATG11YPR049C RPN6Q12377 434 aa1.47□□□□□ -2.17
ATG11YPR049C EAF3Q12432 401 aa1.47□□□□□ -2.17
ATG11YPR049C MHF2Q3E829 80 aa1.47□□□□□ -2.17
ATG11YPR049C ISN1Q99312 450 aa1.47□□□□□ -2.17
ATG11YPR049C RPL31BP0C2H9 113 aaKnown RBP1.47□□□□□ -2.17
ATG11YPR049C RPL24BP24000 155 aaKnown RBP1.47□□□□□ -2.17
ATG11YPR049C TRM5P38793 499 aa1.47□□□□□ -2.17
ATG11YPR049C YFR057WP43625 151 aa1.47□□□□□ -2.17
ATG11YPR049C YGL159WP53110 370 aa1.47□□□□□ -2.17
ATG11YPR049C SLX9P53251 210 aaPredicted RBP1.47□□□□□ -2.17
ATG11YPR049C NUP49Q02199 472 aa1.47□□□□□ -2.17
ATG11YPR049C ATG39Q06159 398 aa1.47□□□□□ -2.17
ATG11YPR049C GPN3Q06543 272 aa1.47□□□□□ -2.17
ATG11YPR049C TFB5Q3E7C1 72 aaPredicted RBP1.47□□□□□ -2.17
ATG11YPR049C MSW1P04803 379 aa1.46□□□□□ -2.17
ATG11YPR049C COX9P07255 59 aa1.46□□□□□ -2.17
ATG11YPR049C CHO1P08456 276 aa1.46□□□□□ -2.17
ATG11YPR049C PET18P25362 215 aa1.46□□□□□ -2.17
ATG11YPR049C PDB1P32473 366 aaKnown RBP1.46□□□□□ -2.17
ATG11YPR049C AST1P35183 429 aa1.46□□□□□ -2.17
ATG11YPR049C YKR045CP36138 183 aa1.46□□□□□ -2.17
ATG11YPR049C NRG2P38082 220 aa1.46□□□□□ -2.17
ATG11YPR049C BNA6P43619 295 aa1.46□□□□□ -2.17
ATG11YPR049C YMR102CQ03177 834 aa1.46□□□□□ -2.17
ATG11YPR049C GIM5Q04493 163 aa1.46□□□□□ -2.17
ATG11YPR049C ATO3Q12359 275 aa1.46□□□□□ -2.17
ATG11YPR049C CDC8P00572 216 aa1.46□□□□□ -2.18
ATG11YPR049C MET17P06106 444 aa1.46□□□□□ -2.18
ATG11YPR049C SAR1P20606 190 aaKnown RBP1.46□□□□□ -2.18
ATG11YPR049C ATP7P30902 174 aa1.46□□□□□ -2.18
ATG11YPR049C ERG3P32353 365 aa1.46□□□□□ -2.18
ATG11YPR049C VMA6P32366 345 aaKnown RBP1.46□□□□□ -2.18
ATG11YPR049C PPQ1P32945 549 aa1.46□□□□□ -2.18
ATG11YPR049C DID2P69771 204 aa1.46□□□□□ -2.18
ATG11YPR049C ELP6Q04868 273 aa1.46□□□□□ -2.18
ATG11YPR049C ASA1Q06822 443 aa1.46□□□□□ -2.18
ATG11YPR049C RPL25P04456 142 aaKnown RBP1.46□□□□□ -2.18
ATG11YPR049C RNA15P25299 296 aaPredicted RBP1.46□□□□□ -2.18
ATG11YPR049C SKG1P36169 355 aa1.46□□□□□ -2.18
ATG11YPR049C DFG10P40526 253 aa1.46□□□□□ -2.18
ATG11YPR049C MSS2P40990 351 aa1.46□□□□□ -2.18
ATG11YPR049C TRS85P46944 698 aa1.46□□□□□ -2.18
ATG11YPR049C CWC27Q02770 301 aa1.46□□□□□ -2.18
ATG11YPR049C YMR130WQ04223 302 aa1.46□□□□□ -2.18
ATG11YPR049C SPC24Q04477 213 aa1.46□□□□□ -2.18
ATG11YPR049C YLR345WQ06137 509 aa1.46□□□□□ -2.18
ATG11YPR049C MRX9Q07349 420 aaKnown RBP1.46□□□□□ -2.18
ATG11YPR049C MED2Q12124 431 aa1.46□□□□□ -2.18
ATG11YPR049C MSH5Q12175 901 aa1.46□□□□□ -2.18
ATG11YPR049C RPL30P14120 105 aaKnown RBP1.45□□□□□ -2.18
ATG11YPR049C PCL1P24867 279 aa1.45□□□□□ -2.18
ATG11YPR049C SPR6Q01684 191 aa1.45□□□□□ -2.18
ATG11YPR049C PBA1Q05778 276 aa1.45□□□□□ -2.18
ATG11YPR049C YDL199CQ12407 687 aa1.45□□□□□ -2.18
ATG11YPR049C VCX1Q99385 411 aa1.45□□□□□ -2.18
ATG11YPR049C MRP1P10662 321 aaKnown RBP1.45□□□□□ -2.18
ATG11YPR049C YBL010CP32788 280 aa1.45□□□□□ -2.18
ATG11YPR049C FCY21P40039 528 aa1.45□□□□□ -2.18
ATG11YPR049C COX15P40086 486 aa1.45□□□□□ -2.18
ATG11YPR049C RPA34P47006 233 aaPredicted RBP1.45□□□□□ -2.18
ATG11YPR049C MRX5P47007 382 aa1.45□□□□□ -2.18
ATG11YPR049C RRN9P53437 365 aa1.45□□□□□ -2.18
ATG11YPR049C SDO1Q07953 250 aaKnown RBP1.45□□□□□ -2.18
ATG11YPR049C VAM10Q08474 114 aa1.45□□□□□ -2.18
ATG11YPR049C SKI7Q08491 747 aaPredicted RBP1.45□□□□□ -2.18
ATG11YPR049C SLF1Q12034 447 aaKnown RBP1.45□□□□□ -2.18
ATG11YPR049C RTN2Q12443 393 aa1.45□□□□□ -2.18
ATG11YPR049C KIN28P06242 306 aa1.45□□□□□ -2.18
ATG11YPR049C YMR31P19955 123 aa1.45□□□□□ -2.18
ATG11YPR049C PHO80P20052 293 aa1.45□□□□□ -2.18
ATG11YPR049C PCL6P40038 420 aa1.45□□□□□ -2.18
ATG11YPR049C COS10P52924 374 aa1.45□□□□□ -2.18
ATG11YPR049C ORM1P53224 222 aa1.45□□□□□ -2.18
ATG11YPR049C FIN1Q03898 291 aa1.45□□□□□ -2.18
ATG11YPR049C GAL83Q04739 417 aa1.45□□□□□ -2.18
ATG11YPR049C FYV7Q12247 151 aa1.45□□□□□ -2.18
ATG11YPR049C DFR1P07807 211 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
ATG11YPR049C CPR2P23285 205 aa1.44□□□□□ -2.18
ATG11YPR049C YCR101CP25607 182 aa1.44□□□□□ -2.18
ATG11YPR049C ERG2P32352 222 aa1.44□□□□□ -2.18
ATG11YPR049C YER085CP40058 173 aa1.44□□□□□ -2.18
ATG11YPR049C RMR1P53060 241 aa1.44□□□□□ -2.18
ATG11YPR049C YGR017WP53210 297 aa1.44□□□□□ -2.18
ATG11YPR049C CTF19Q02732 369 aa1.44□□□□□ -2.18
ATG11YPR049C RPL21AQ02753 160 aaKnown RBP1.44□□□□□ -2.18
ATG11YPR049C MAK3Q03503 176 aa1.44□□□□□ -2.18
ATG11YPR049C YFH1Q07540 174 aa1.44□□□□□ -2.18
ATG11YPR049C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
ATG11YPR049C CSM4Q08955 156 aa1.44□□□□□ -2.18
ATG11YPR049C ORT1Q12375 292 aa1.44□□□□□ -2.18
ATG11YPR049C DGK1Q12382 290 aa1.44□□□□□ -2.18
ATG11YPR049C RPL21BQ12672 160 aaKnown RBP1.44□□□□□ -2.18
ATG11YPR049C BOL1Q3E793 110 aa1.44□□□□□ -2.18
ATG11YPR049C TMA19P35691 167 aaKnown RBP1.44□□□□□ -2.18
ATG11YPR049C MET28P40573 187 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms